mRNA_E-fasciculatus_F_contig14113.3013.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14113.3013.1 vs. uniprot
Match: D8LFB8_ECTSI (Protein SDA1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFB8_ECTSI) HSP 1 Score: 246 bits (628), Expect = 2.260e-74 Identity = 124/127 (97.64%), Postives = 127/127 (100.00%), Query Frame = 1
Query: 1 MPVIKAVAYNFVTERCPGEVMALGINSIREVARRIPALLEEEGMDVLVLDLAAYSKHSDKSVVVAARGFINFVRETYPSLLKSRDRGREHDITARPAKYGSRSVSEGVDGAELLTLHEQGLMPLEKD 381
MPVIKAVAYNFVTERCPGEVMALGINSIREVARRIPALLEEEGMDVLV+DLAAYSKH+DKSVVVAARGFINFVRETYPSLLKSRDRGREHDITARPAKYGSRSVSEGVDGA+LLTLHEQGLMPLEKD
Sbjct: 377 MPVIKAVAYNFVTERCPGEVMALGINSIREVARRIPALLEEEGMDVLVVDLAAYSKHADKSVVVAARGFINFVRETYPSLLKSRDRGREHDITARPAKYGSRSVSEGVDGADLLTLHEQGLMPLEKD 503
BLAST of mRNA_E-fasciculatus_F_contig14113.3013.1 vs. uniprot
Match: A0A835Z7A4_9STRA (Protein SDA1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7A4_9STRA) HSP 1 Score: 168 bits (425), Expect = 1.220e-45 Identity = 77/122 (63.11%), Postives = 101/122 (82.79%), Query Frame = 1
Query: 1 MPVIKAVAYNFVTERCPGEVMALGINSIREVARRIPALLEEEGMDVLVLDLAAYSKHSDKSVVVAARGFINFVRETYPSLLKSRDRGREHDITARPAKYGSRSVSEGVDGAELLTLHEQGLM 366
+P+IKA+A+N VTERC G+VMA+GINSI+E+ RR+PA L E+GMD D+AAY+K DKSVV+AARGF N VRE +P LL++RDRG+ HDI+A+PA+YG + V EGVDGAELLTL + G++
Sbjct: 375 LPIIKAIAHNMVTERCSGDVMAVGINSIKEIIRRVPATLSEDGMDAFAQDIAAYAKSRDKSVVIAARGFTNLVREVHPRLLRARDRGKHHDISAQPAQYGEQKVLEGVDGAELLTLADAGIL 496
BLAST of mRNA_E-fasciculatus_F_contig14113.3013.1 vs. uniprot
Match: A0A7S3M8Q0_9STRA (Protein SDA1 (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M8Q0_9STRA) HSP 1 Score: 143 bits (361), Expect = 3.040e-37 Identity = 66/127 (51.97%), Postives = 92/127 (72.44%), Query Frame = 1
Query: 1 MPVIKAVAYNFVTERCPGEVMALGINSIREVARRIPALLEEEGMDVLVLDLAAYSKHSDKSVVVAARGFINFVRETYPSLLKSRDRGREHDITARPAKYGSRSVSEGVDGAELLTLHEQGLMPLEKD 381
+P++KA+AYNF+TERC E +A+GIN++RE+ R PALL E GM V DLA Y + + KSV++AA G +N VRE YP+LLK DRG+ H+ A+P +YG R V++GV+G ELL +E+G + L D
Sbjct: 375 LPIVKAIAYNFITERCTNESIAVGINAVREIIARSPALLREPGMGDFVQDLAMYGRKTHKSVMIAAHGMVNLVRELYPTLLKKGDRGKHHNPNAQPFEYGQRPVADGVEGVELLEAYERGEIELNSD 501
BLAST of mRNA_E-fasciculatus_F_contig14113.3013.1 vs. uniprot
Match: A0A2P4WVK5_9STRA (Protein SDA1 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WVK5_9STRA) HSP 1 Score: 141 bits (355), Expect = 4.990e-37 Identity = 64/114 (56.14%), Postives = 92/114 (80.70%), Query Frame = 1
Query: 1 MPVIKAVAYNFVTERCPGEVMALGINSIREVARRIPALLEEEGMDVLVLDLAAYSKHSDKSVVVAARGFINFVRETYPSLLKSRDRGREHDITARPAKYGSRSVSEGVDGAELL 342
+P++K++A+NFVTERC EV+A+GINS+RE+ RR+P LLE EGMDVLV DL Y++ DK++V+AARG +N +R+ +P+LLK +DRG+ H+ A+P ++G SEGVDGA+LL
Sbjct: 91 LPIVKSIAHNFVTERCSSEVIAVGINSLRELFRRVPLLLECEGMDVLVSDLVQYNRARDKTIVMAARGVLNLIRDIHPALLKRKDRGKFHNDAAKPHRFGELVASEGVDGADLL 204
BLAST of mRNA_E-fasciculatus_F_contig14113.3013.1 vs. uniprot
Match: A0A5D6XJK4_9STRA (Protein SDA1 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJK4_9STRA) HSP 1 Score: 143 bits (360), Expect = 1.820e-36 Identity = 65/114 (57.02%), Postives = 91/114 (79.82%), Query Frame = 1
Query: 1 MPVIKAVAYNFVTERCPGEVMALGINSIREVARRIPALLEEEGMDVLVLDLAAYSKHSDKSVVVAARGFINFVRETYPSLLKSRDRGREHDITARPAKYGSRSVSEGVDGAELL 342
+P++K++A+NF+TERC EV+A+GIN++REV RR+P +LE EGMDVL+ DL YSK DKS V+AARG +N +RE +P+LLK ++RG+ HD TA+P ++G +EGVDG ELL
Sbjct: 372 LPLVKSIAHNFITERCSSEVIAVGINAVREVFRRVPLVLECEGMDVLIADLIMYSKSRDKSAVMAARGVLNLIREIHPTLLKRKERGKFHDGTAKPKQFGELVAAEGVDGVELL 485
BLAST of mRNA_E-fasciculatus_F_contig14113.3013.1 vs. uniprot
Match: A0A3R7J615_9STRA (Protein SDA1 n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J615_9STRA) HSP 1 Score: 141 bits (356), Expect = 5.150e-36 Identity = 65/114 (57.02%), Postives = 92/114 (80.70%), Query Frame = 1
Query: 1 MPVIKAVAYNFVTERCPGEVMALGINSIREVARRIPALLEEEGMDVLVLDLAAYSKHSDKSVVVAARGFINFVRETYPSLLKSRDRGREHDITARPAKYGSRSVSEGVDGAELL 342
+PV+K++A+NF+TERC EV+A+GINS+RE+ RR+P LLE EG DVLV DL Y++ DK++V+AARG +N +R+ +PSLLK +DRG+ H+ TA+P ++G SEGVDGA+LL
Sbjct: 341 LPVVKSIAHNFITERCSSEVIAVGINSLRELFRRVPLLLECEGTDVLVSDLIQYNRARDKTIVMAARGVLNLIRDIHPSLLKRKDRGKFHNDTAKPHRFGELVASEGVDGADLL 454
BLAST of mRNA_E-fasciculatus_F_contig14113.3013.1 vs. uniprot
Match: A0A8K1CSC6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CSC6_PYTOL) HSP 1 Score: 140 bits (352), Expect = 2.110e-35 Identity = 64/114 (56.14%), Postives = 90/114 (78.95%), Query Frame = 1
Query: 1 MPVIKAVAYNFVTERCPGEVMALGINSIREVARRIPALLEEEGMDVLVLDLAAYSKHSDKSVVVAARGFINFVRETYPSLLKSRDRGREHDITARPAKYGSRSVSEGVDGAELL 342
+P+IK++A NFVTERC EV+A+GIN++RE+ RR+P +LE EGMD LV DL Y++ DK++V+AARG +N +RE +P+LLK +DRG+ HD ARP ++G +EGV+GAELL
Sbjct: 371 LPIIKSIANNFVTERCSSEVIAVGINALREIFRRVPLVLECEGMDALVQDLVMYNRMRDKTIVMAARGILNLIREIHPALLKRKDRGKFHDEAARPKQFGELVAAEGVEGAELL 484
BLAST of mRNA_E-fasciculatus_F_contig14113.3013.1 vs. uniprot
Match: H3GAV2_PHYRM (Protein SDA1 n=18 Tax=Peronosporaceae TaxID=4777 RepID=H3GAV2_PHYRM) HSP 1 Score: 139 bits (350), Expect = 3.950e-35 Identity = 65/113 (57.52%), Postives = 90/113 (79.65%), Query Frame = 1
Query: 4 PVIKAVAYNFVTERCPGEVMALGINSIREVARRIPALLEEEGMDVLVLDLAAYSKHSDKSVVVAARGFINFVRETYPSLLKSRDRGREHDITARPAKYGSRSVSEGVDGAELL 342
P++K++A+NFVTERC EV+A+GINS+RE+ RRIP LLE EGMDVLV DL Y++ DK++V+AARG +N +R+ +P+LLK + RG+ H+ A+P ++G SEGVDGAELL
Sbjct: 372 PIVKSIAHNFVTERCSSEVIAVGINSMRELFRRIPLLLECEGMDVLVSDLVQYNRARDKTIVMAARGVLNLIRDIHPALLKRKQRGKFHNEAAKPHRFGELVASEGVDGAELL 484
BLAST of mRNA_E-fasciculatus_F_contig14113.3013.1 vs. uniprot
Match: A0A484ECZ1_BRELC (Protein SDA1 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484ECZ1_BRELC) HSP 1 Score: 139 bits (349), Expect = 5.300e-35 Identity = 62/114 (54.39%), Postives = 93/114 (81.58%), Query Frame = 1
Query: 1 MPVIKAVAYNFVTERCPGEVMALGINSIREVARRIPALLEEEGMDVLVLDLAAYSKHSDKSVVVAARGFINFVRETYPSLLKSRDRGREHDITARPAKYGSRSVSEGVDGAELL 342
+P++K++A+NF+TERC EV+A+GINS+RE+ RR+P LLE EGMDVLV DL Y++ DK++V+AARG +N +R+ +P+LLK +DRG+ ++ +A+P ++G SEGVDGA+LL
Sbjct: 371 LPIVKSIAHNFITERCSSEVIAVGINSLRELFRRVPLLLECEGMDVLVCDLIQYNRARDKTIVMAARGVLNLIRDIHPALLKRKDRGKLYNDSAKPHRFGELVASEGVDGADLL 484
BLAST of mRNA_E-fasciculatus_F_contig14113.3013.1 vs. uniprot
Match: D0NZ63_PHYIT (Protein SDA1 n=3 Tax=Phytophthora TaxID=4783 RepID=D0NZ63_PHYIT) HSP 1 Score: 138 bits (347), Expect = 5.760e-35 Identity = 63/114 (55.26%), Postives = 91/114 (79.82%), Query Frame = 1
Query: 1 MPVIKAVAYNFVTERCPGEVMALGINSIREVARRIPALLEEEGMDVLVLDLAAYSKHSDKSVVVAARGFINFVRETYPSLLKSRDRGREHDITARPAKYGSRSVSEGVDGAELL 342
+P++K++A+NFVTERC EV+A+GINS+RE+ RR P LLE EG+DVLV DL Y++ DK++V+AARG +N +R+ +P+LLK +DRG+ H+ A+P ++G SEGVDGA+LL
Sbjct: 357 LPIVKSIAHNFVTERCSSEVIAVGINSLRELFRRAPLLLECEGIDVLVSDLIQYNRARDKTIVMAARGVLNLIRDVHPALLKRKDRGKFHNDAAKPHRFGELVASEGVDGADLL 470 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14113.3013.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14113.3013.1 >prot_E-fasciculatus_F_contig14113.3013.1 ID=prot_E-fasciculatus_F_contig14113.3013.1|Name=mRNA_E-fasciculatus_F_contig14113.3013.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=172bp MPVIKAVAYNFVTERCPGEVMALGINSIREVARRIPALLEEEGMDVLVLDback to top mRNA from alignment at E-fasciculatus_F_contig14113:827..2294+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14113.3013.1 ID=mRNA_E-fasciculatus_F_contig14113.3013.1|Name=mRNA_E-fasciculatus_F_contig14113.3013.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1468bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14113:827..2294+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14113:827..2294+ >mRNA_E-fasciculatus_F_contig14113.3013.1 ID=mRNA_E-fasciculatus_F_contig14113.3013.1|Name=mRNA_E-fasciculatus_F_contig14113.3013.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1032bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14113:827..2294+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |