mRNA_E-fasciculatus_F_contig14103.3004.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14103.3004.1 vs. uniprot
Match: D7FJ89_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ89_ECTSI) HSP 1 Score: 249 bits (636), Expect = 2.990e-73 Identity = 146/208 (70.19%), Postives = 159/208 (76.44%), Query Frame = 1
Query: 112 TSSSNSTERLRTILSGAEAAIFDLICTRASIEQWAEWLRTPLEHAVAAGKMGLVVQLAEAGAGGIAVHSAVRRGQEAVVAELLRLGASPREQDEHGDTPLHVAVRHGHHGILTTLLLPQKTNMDVLDGKGRXXXXXXAEQGSLAAVEAMVSAHADLSLRFGDEDRSAMDCAAYFGHADVMKMLIQHGVDVNDAGATGMTPLHTTSAQA 735
+SSS+STERLRTIL+GAEAAIFDLIC ASIEQWAEWLRTPLEHAVAAGKM LVVQLA+AGAGGIAVHSAVRRGQEAVVAELLRLGASP E DE GDTP XXXXXX SLAAVEA+VSAHADL+LRFG D+SAMDCAAYFG+ ++++ L QHGVDVNDAGATGMTPLH +AQA
Sbjct: 7 SSSSSSTERLRTILTGAEAAIFDLICAGASIEQWAEWLRTPLEHAVAAGKMDLVVQLAQAGAGGIAVHSAVRRGQEAVVAELLRLGASPGEPDESGDTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-SLAAVEALVSAHADLNLRFGGRDQSAMDCAAYFGNVEIIRTLNQHGVDVNDAGATGMTPLHIAAAQA 213
BLAST of mRNA_E-fasciculatus_F_contig14103.3004.1 vs. uniprot
Match: A0A6H5K8F3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8F3_9PHAE) HSP 1 Score: 240 bits (612), Expect = 3.090e-70 Identity = 139/224 (62.05%), Postives = 158/224 (70.54%), Query Frame = 1
Query: 100 MAASTSSSNSTERLRTILSGAEAAIFDLICTRASIEQWAEWLRTPLEHAVAAGKMGLVVQLAEAGAGGIAVHSAVRRGQEAVVAELLRLGASPREQDEHGDTPLHVAVRHGHHGILTTLLLPQKTNMDVLDGKGRXXXXXXAEQGSLAAVEAMVSAHADLSLRFGDEDRSAMDCAAYFGHADVMKMLIQHGVDVNDAGATGM----------TPLHTTSAQAQV 741
MA STSSS STE LR IL+GAEA IFDLIC ASIEQW EWL+TP +HAVAAGK+ L+VQLA+AGAGGI+VHSAVRRG E DE GDTPLH+A GHH ILT LLL Q+ ++ LDG+ AEQGSLAAVEA+VSAHA+LSLRFGD+D SAMD AAYFGH DVM++LIQHG+D +DAGATG TPLH A V
Sbjct: 1 MAESTSSS-STESLRAILTGAEAVIFDLICAGASIEQWTEWLQTPFQHAVAAGKIDLIVQLAQAGAGGISVHSAVRRG----------------EPDESGDTPLHIAASLGHHSILTLLLL-QEAEVNALDGEDSAPLHVEAEQGSLAAVEALVSAHANLSLRFGDDDLSAMDRAAYFGHVDVMRVLIQHGIDQSDAGATGADVGAEDCGGDTPLHLAVRSASV 206
BLAST of mRNA_E-fasciculatus_F_contig14103.3004.1 vs. uniprot
Match: A0A6H5JW93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW93_9PHAE) HSP 1 Score: 224 bits (572), Expect = 2.700e-64 Identity = 138/211 (65.40%), Postives = 144/211 (68.25%), Query Frame = 1
Query: 115 SSSNSTERLRTILSGAEAAIFDLICTRASIEQWAEWLRTPLEHAVAAGKMGLVVQLAEAGAGGIAVHSAVRRGQEAVVAELLRLGASPREQDEHGDTPLHVAVRHGHHGILTTLLLPQKTNMDVLDGKGRXXXXXXAEQGSLAAVEAMVSAHADLSLRFGDEDRSAMDCAAYFGHADVMKMLIQHGVDVNDAGATGMTPLHTTSAQAQVPA 747
SSS+STERLRTIL+GAEAAIFDLIC ASIE WAEWLRTPLEHAVAAGK LVVQLA+AGAGGIAVHSAVRRGQE VVAELLRLGASP E DE GDTP XXXXXX S HADL LRFGDEDRSAMD AY GH D+M+ML QHGVDV D GA MTPLH +AQAQVPA
Sbjct: 8 SSSSSTERLRTILTGAEAAIFDLICAGASIEPWAEWLRTPLEHAVAAGKTDLVVQLAQAGAGGIAVHSAVRRGQEVVVAELLRLGASPGEPDESGDTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXSTHADLILRFGDEDRSAMDNTAYVGHVDLMRMLKQHGVDVCDVGAACMTPLHIAAAQAQVPA 217
BLAST of mRNA_E-fasciculatus_F_contig14103.3004.1 vs. uniprot
Match: A0A6H5L7B7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7B7_9PHAE) HSP 1 Score: 208 bits (530), Expect = 1.000e-58 Identity = 119/216 (55.09%), Postives = 145/216 (67.13%), Query Frame = 1
Query: 118 SSNSTERLRTILSGAEAAIFDLICTRASIEQWAEWLRTPLEHAVAAGKMGLVVQLAEAGAGGI---AVHSAVRRGQEAVVAELLRLGASPREQDEHGDTPLHVAVRHGHHGILTTLLLPQKTNMDVLDGKGRXXXXXXAEQGSLAAVEAMVSAHADLSLRFGDEDRSAMDCAAYFGHADVMKMLIQHGVDVNDAGATGMTPLHTTSAQAQVPATQA 756
S+ ST+ +RTIL G++ AIFDL+C AS +QW EWLRTP+E+AVAAG + LVV+LA+AG G A+ SAVRRG +A E DE G+TPLH+A GH I LLL QK ++ LDG+ R A + SLA V+A+VSAHADL LRFGD D S MDCAA FG+ D+M L QHGV VNDA ATGMTPLH + QAQ+PA A
Sbjct: 7 STTSTQSIRTILQGSDGAIFDLLCAGASNQQWTEWLRTPVEYAVAAGNLDLVVKLAQAGQAGARNSAMPSAVRRGHDA-------------EPDERGNTPLHIAASLGHDAI-NALLLLQKAAVNSLDGEDRTPLHLAAGKDSLAGVKALVSAHADLRLRFGDADESPMDCAACFGYVDMMLTLTQHGVGVNDAAATGMTPLHIAAGQAQLPAIDA 208
BLAST of mRNA_E-fasciculatus_F_contig14103.3004.1 vs. uniprot
Match: D7FJ34_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ34_ECTSI) HSP 1 Score: 209 bits (532), Expect = 4.880e-58 Identity = 126/207 (60.87%), Postives = 144/207 (69.57%), Query Frame = 1
Query: 133 ERLRTILSGAEAAIFDLICTRASIEQWAEWLRTPLEHAVAAGKMGLVVQLAEAGAGGIAVHSAVRRGQEAVVAELLRLGASPREQDEHGDTPLHVAVRHGHHGILTTLLLPQKTNMDVLDGKGRXXXXXXAEQGSLAAVEAMVSAHADLSLRFGDEDRSAMDCAAYFGHADVMKMLIQHGVDVNDAGATGMTPLHTTSAQAQVPATQ 753
+ LRTILSG+EAAIFDLI SI+QWAEWLRTPLEHAVA G M LVV+LA+AGA AVH AVR+G EAVVAELLRLGASP E DE GDTPL XXXXXX GSLAAVEA+VSA+AD ++RFGDE++SAMDCA FGH +M+ LIQHGV VNDAGAT +TPLH + +A +PA Q
Sbjct: 6 QNLRTILSGSEAAIFDLIFGTTSIQQWAEWLRTPLEHAVAEGDMDLVVKLAQAGASRSAVHLAVRQGHEAVVAELLRLGASPSEPDESGDTPLXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGSLAAVEALVSANADHTVRFGDEEKSAMDCAVCFGHVHIMRALIQHGVGVNDAGATSITPLHIAADRALLPAIQ 211
BLAST of mRNA_E-fasciculatus_F_contig14103.3004.1 vs. uniprot
Match: A0A6H5JN84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN84_9PHAE) HSP 1 Score: 118 bits (296), Expect = 2.990e-26 Identity = 83/194 (42.78%), Postives = 104/194 (53.61%), Query Frame = 1
Query: 142 RTILSGAEAAIFDLICTRASIEQWAEWLRTPLEHAVAAGKMGLVVQLAEAGAGGIAVHSAVRRGQEAVVAELLRLGASPREQDEHGDTPLHVAVRHGHHGILTTLLLPQKTNMDVLDGKGRXXXXXXAEQGSLAAVEAMVSAHADLSLRFG-DEDRSAMDCAAYFGHADVMKMLIQHGVDVNDAGATGMTPLHT 720
R L G E IFDL+C S QWAEWLRTPLEHA +AG + LV +L EA AGG A+H A+R GQ+A+ ELLRLGA + D +GDTP XXXXXX +A D SLR+G D+ SA+ AA GH +VM+ LI+HGVDV+ + +T LH+
Sbjct: 23 RVKLRGTEETIFDLVCAGTSKMQWAEWLRTPLEHAASAGNLDLVTKLQEAEAGGSALHLALRAGQDALARELLRLGAPTKAIDNNGDTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXAAGEDSSLRYGKDKAFSALGLAARGGHVEVMQALIRHGVDVDAPDSNSLTALHS 215
BLAST of mRNA_E-fasciculatus_F_contig14103.3004.1 vs. uniprot
Match: D7FHH2_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH2_ECTSI) HSP 1 Score: 114 bits (286), Expect = 6.390e-25 Identity = 80/206 (38.83%), Postives = 107/206 (51.94%), Query Frame = 1
Query: 142 RTILSGAEAAIFDLICTRASIEQWAEWLRTPLEHAVAAGKMGLVVQLAEAGAGGIAVHSAVRRGQEAVVAELLRLGASPREQDEHGDTPLHVAVRHGHHGILTTLLLPQKTNMDVLDGKGRXXXXXXAEQGSLAAVEAMVSAHADLSLRFG-DEDRSAMDCAAYFGHADVMKMLIQHGVDVNDAGATGMTPLHTTSAQAQVPATQA 756
R L G E +IFDL+C + +W+EWLRTPLEHA AG + LV +L AGAGG A+H A++ GQ+A+ LL +GA +E+D+ GD XXXXXX A++ A D S R+G D+ SA+ AA GH +VM+ LI+HGVDVN + G T LH+ + V A A
Sbjct: 24 RAKLRGVEESIFDLVCAGTNRRKWSEWLRTPLEHAAGAGNLDLVTKLQGAGAGGSALHLALKAGQDALARGLLEMGAPSKEKDDSGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXALLDAGGDSSFRYGKDKAFSALSLAARRGHVEVMQALIRHGVDVNAPDSNGCTALHSAAMGDTVGAINA 228
BLAST of mRNA_E-fasciculatus_F_contig14103.3004.1 vs. uniprot
Match: A0A6H5JN15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN15_9PHAE) HSP 1 Score: 113 bits (282), Expect = 2.110e-24 Identity = 82/214 (38.32%), Postives = 110/214 (51.40%), Query Frame = 1
Query: 121 SNSTERL--RTILSGAEAAIFDLICTRASIEQWAEWLRTPLEHAVAAGKMGLVVQLAEAGAGGIAVHSAVRRGQEAVVAELLRLGASPREQDEHGDTPLHVAVRHGHHGILTTLLLPQKTNMDVLDGKGRXXXXXXAEQGSLAAVEAMVSAHADLSLRFGD-EDRSAMDCAAYFGHADVMKMLIQHGVDVNDAGATGMTPLHTTSAQAQVPATQ 753
S S+E+L R L G E IFDL+C + QWAEWLRTPLEHA AG + LV + + +RR L L PL + I LLL +DVLD KGR A++GSL+AV+A+++A D SLR+G E SA+ AA GH +VM+ LI+HGVDV+ + G+T LH+ + V A +
Sbjct: 15 SESSEQLSSRAKLRGTEETIFDLVCAGTNRMQWAEWLRTPLEHAAGAGNLDLVTKS----------YRKLRRAGTTTAIPLSTL------------LPLVASA------ISCPLLLRDGAEVDVLDTKGRTPIHLSAKRGSLSAVQALLAAGGDSSLRYGKGEAFSALGLAARGGHVEVMQALIRHGVDVDAPDSNGLTALHSAATGDAVGAIE 200
BLAST of mRNA_E-fasciculatus_F_contig14103.3004.1 vs. uniprot
Match: D7G751_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G751_ECTSI) HSP 1 Score: 109 bits (273), Expect = 3.310e-23 Identity = 78/196 (39.80%), Postives = 99/196 (50.51%), Query Frame = 1
Query: 142 RTILSGAEAAIFDLICTRASIEQWAEWLRTPLEHAVAAGKMGLVVQLAEAGAGGIAVHSAVRRGQEAVVAELLRLGASPREQDEHGDTPLHVAVRHGHHGILTTLLLPQKTNMDVLDGKGRXXXXXXAEQGSLAAVEAMVSAHADLSLRFGDEDR-SAMDCAAYFGHADVMKMLIQHGVDVNDAGATGMTPLHTTS 726
R+ L G E IFDL+C + QWAEWLRTPLEHA G + LV +L AGAGG A+H A+R GQ+A+ ELLRLGA + +D +GDT XXXXXX SLR+G SA+ AA GH +VM+ LI+HGVDV+ + G T LH+ +
Sbjct: 23 RSNLRGTEKTIFDLVCAGTNRRQWAEWLRTPLEHAAGVGNIDLVTKLQGAGAGGSALHLALRAGQDALAQELLRLGAPTKAKDNNGDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXSLRYGKGKAFSALGLAARGGHVEVMQALIRHGVDVDGPDSNGCTALHSAA 217
BLAST of mRNA_E-fasciculatus_F_contig14103.3004.1 vs. uniprot
Match: A0A6H5JT48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT48_9PHAE) HSP 1 Score: 96.7 bits (239), Expect = 6.860e-19 Identity = 74/181 (40.88%), Postives = 94/181 (51.93%), Query Frame = 1
Query: 211 WAEWLRTPLEHAVAAGKMGLVVQLAEAGAGGIAVHSAVRRGQEAVVAELLRLGASPREQDEHGDTPLHVAVRHGHHGILTTLLLPQKTNMDVLDGKGRXXXXXXAEQGSLAAVEAMVSAHADLSLRFG-DEDRSAMDCAAYFG-HADVMKMLIQHGVDVNDAGATGMTPLHTTSAQAQVPA 747
W EWLRTPLEHA AG + LV +L AGAGG A+H A+R GQ+A+ ELLRLGA + ++GDTP XXXXXX +A D SLR+G DE SA+ AA G + +VM+ LI+HGVDVN + G T LH+ + +V A
Sbjct: 12 WVEWLRTPLEHAAGAGNLDLVTKLQGAGAGGSALHLALRAGQDALARELLRLGAPTKAMAKNGDTP-RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGGDPSLRYGKDEALSALGLAASSGGYVEVMQALIRHGVDVNAHDSNGCTALHSAAMGDKVGA 191 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14103.3004.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14103.3004.1 >prot_E-fasciculatus_F_contig14103.3004.1 ID=prot_E-fasciculatus_F_contig14103.3004.1|Name=mRNA_E-fasciculatus_F_contig14103.3004.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=254bp MAASTSSSNSTERLRTILSGAEAAIFDLICTRASIEQWAEWLRTPLEHAVback to top mRNA from alignment at E-fasciculatus_F_contig14103:2564..3424+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14103.3004.1 ID=mRNA_E-fasciculatus_F_contig14103.3004.1|Name=mRNA_E-fasciculatus_F_contig14103.3004.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=861bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14103:2564..3424+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14103:2564..3424+ >mRNA_E-fasciculatus_F_contig14103.3004.1 ID=mRNA_E-fasciculatus_F_contig14103.3004.1|Name=mRNA_E-fasciculatus_F_contig14103.3004.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1524bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14103:2564..3424+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |