mRNA_E-fasciculatus_F_contig14100.3003.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig14100.3003.1
Unique NamemRNA_E-fasciculatus_F_contig14100.3003.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14100.3003.1 vs. uniprot
Match: D8LFC6_ECTSI (Homologue of the meiosis-specific protein HOP1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFC6_ECTSI)

HSP 1 Score: 351 bits (901), Expect = 1.580e-116
Identity = 171/178 (96.07%), Postives = 175/178 (98.31%), Query Frame = 1 
Query:    1 RDADTDETVVKDQEAYNLTMWLESGVFKAVEHRYLRRMEFIIMSPNHENPREAYSFDLSYPEDQGDEAVIFSGTKVTTVKSTKNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPEYFREADPSELAFKNGKSDKEIHDKLKIKIGDLQTPHHTLSLRFRGYDTHDQ 534
            RDADTDETVVKDQEAY+LTMWLESGVFKAVEHRYLRRMEFIIMSPNHENPREAYSFDLSYPEDQ DEAVIFSGTKVTTVKS KNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQP+YFREADPSELAFKNGKSDKEIH+KLKIKIGDLQTPHHTLSLRFRGYDT +Q
Sbjct:   97 RDADTDETVVKDQEAYDLTMWLESGVFKAVEHRYLRRMEFIIMSPNHENPREAYSFDLSYPEDQEDEAVIFSGTKVTTVKSAKNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPDYFREADPSELAFKNGKSDKEIHNKLKIKIGDLQTPHHTLSLRFRGYDTQEQ 274
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14100.3003.1 vs. uniprot
Match: A0A6H5L5T0_9PHAE (HORMA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5T0_9PHAE)

HSP 1 Score: 282 bits (721), Expect = 5.290e-90
Identity = 136/141 (96.45%), Postives = 138/141 (97.87%), Query Frame = 1 
Query:  112 MEFIIMSPNHENPREAYSFDLSYPEDQGDEAVIFSGTKVTTVKSTKNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPEYFREADPSELAFKNGKSDKEIHDKLKIKIGDLQTPHHTLSLRFRGYDTHDQ 534
            MEFIIMSPNHENPREAYSFDLSYPEDQGDEAVIFSGTKVTTVKS KNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQP+YFREADPSELAFKN KSDKEIHDKLKIKIGDLQTPHHTLSLRFRGYDT +Q
Sbjct:    1 MEFIIMSPNHENPREAYSFDLSYPEDQGDEAVIFSGTKVTTVKSAKNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPDYFREADPSELAFKNCKSDKEIHDKLKIKIGDLQTPHHTLSLRFRGYDTQEQ 141
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14100.3003.1 vs. uniprot
Match: D8M718_BLAHO (HORMA domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M718_BLAHO)

HSP 1 Score: 108 bits (270), Expect = 2.260e-25
Identity = 64/169 (37.87%), Postives = 97/169 (57.40%), Query Frame = 1 
Query:   28 VKDQEAYNLTMWLESGVFKAVEHRYLRRMEFIIMSPNHENPR-----EAYSFDLSYPEDQGDEAVIFSGTK--VTTVKSTKNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPEYFREADPSELAFKNGKSDKEIHDKLKIKIGDLQTPHHTLSLRFR 513
            + + EA+ LT WLE GVF A+E RYLR + F I   N EN       E YS+  +YP+ Q  +  +    +  V +    KN+ + L+R+LI+  +TL  LPRER + ++L+Y+DD TPP +QP YF   D ++ + + G S   I D   I+ G L+TP H + ++ R
Sbjct:   68 IHNSEAWQLTRWLEEGVFDALEKRYLRGLVFAIYD-NPENKSQSRLIETYSYAFTYPDTQHIQLEVKQNNERSVVSTDGVKNQAVILLRTLITLCSTLSPLPRERWITLQLYYYDDITPPDYQPAYFE--DTADSSIRPGDSSF-ISDPFVIEAGRLRTPFHAMCMKVR 232
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BLAST of mRNA_E-fasciculatus_F_contig14100.3003.1 vs. uniprot
Match: A0A835YQL7_9STRA (HORMA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQL7_9STRA)

HSP 1 Score: 106 bits (264), Expect = 1.320e-23
Identity = 62/172 (36.05%), Postives = 97/172 (56.40%), Query Frame = 1 
Query:   61 WLESGVFKAVEHRYLRRMEFIIMSPNHE-------NP---REAYSFDLSYPEDQGDEAVIFSGTKVTTVKSTKNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPEYFREADPSELAFKNGKSDKEIHDKLKIKIGDLQTPHHTLSLRFRGYDT---HDQP 537
            W+E GV +A++ +YLR++EFII  P  E       +P   +E YS+  SY   +    V   G    T  + K  +   IR  I F NTL  LP ER++ +K++Y++D TPPG+QP++F++A  S L+      +    + + ++I  ++TP+HTL LRF G D+   HD P
Sbjct:   76 WIERGVCQAMDLQYLRKLEFIIAKPGEEAADGTKISPDCVQERYSWGFSYSSGE----VHLDGVGDYTRATMKQHIRQFIRLTIMFANTLEALPTERLITMKMFYYEDITPPGYQPDFFQDAPASMLSTFG--DEVVATNVVTVRIAHVETPYHTLKLRFEGIDSSSKHDDP 241
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14100.3003.1 vs. uniprot
Match: W7TNY4_9STRA (Horma domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNY4_9STRA)

HSP 1 Score: 103 bits (257), Expect = 1.970e-22
Identity = 65/187 (34.76%), Postives = 98/187 (52.41%), Query Frame = 1 
Query:   28 VKDQEAYNLTMWLESGVFKAVEHRYLRRMEFIIMSPN-------------------HENPREAYSFDLSYPEDQGDEAVIFSGTKVTTVKST-KNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPEYFREADPSELAFKNGKSDKEIHDK--LKIKIGDLQTPHHTLSLRFRGYD 522
            V+ +EA+ LT WLE GVF A+  RYLR + F I  P                    HE   E Y + + Y +D     V  + ++V   K+  K + I+LIR+L+ F +TL  LP  R L++KL Y+D+RTPP ++P +F+ A   +           + DK  LK+KIG++ +P + L L+F G D
Sbjct:   72 VRHEEAHLLTNWLEQGVFDALSKRYLRAVVFAISIPTPPTSLSCSAAIDERGAENAHEKVIETYQWKVGYTDDG---EVTLNASRVARTKADLKAQAISLIRALLMFTHTLESLPCHRTLSLKLLYYDERTPPAYEPPFFQRAARGDCLA--------VEDKGALKVKIGNVVSPQYALELKFVGVD 247
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14100.3003.1 vs. uniprot
Match: A0A4D9CRV9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRV9_9STRA)

HSP 1 Score: 103 bits (257), Expect = 2.140e-22
Identity = 64/187 (34.22%), Postives = 98/187 (52.41%), Query Frame = 1 
Query:   28 VKDQEAYNLTMWLESGVFKAVEHRYLRRMEFIIMSPN-------------------HENPREAYSFDLSYPEDQGDEAVIFSGTKVTTVKST-KNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPEYFREADPSELAFKNGKSDKEIHDK--LKIKIGDLQTPHHTLSLRFRGYD 522
            V+ +EA+ LT WLE GVF A+  RYLR + F I  P                    HE   E Y + + Y +D     V  + +++   K+  K + I+LIR+L+ F +TL  LP  R L++KL Y+D+RTPP ++P +F+ A   +           + DK  LK+KIG++ +P + L L+F G D
Sbjct:   72 VRHEEAHLLTNWLEQGVFDALSKRYLRAVVFAISIPTPPASLSCSAATDKRGGENAHEKVIETYQWKIGYTDDG---EVTLNASRIARTKADLKAQAISLIRALLMFTHTLESLPCHRTLSLKLLYYDERTPPAYEPPFFQRAARGDCLA--------VEDKGALKVKIGNVVSPQYALELKFVGVD 247
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14100.3003.1 vs. uniprot
Match: UPI000711C540 (hypothetical protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI000711C540)

HSP 1 Score: 99.8 bits (247), Expect = 6.500e-22
Identity = 65/184 (35.33%), Postives = 101/184 (54.89%), Query Frame = 1 
Query:   16 DETVVKDQEAYNLTMWLESG------VFKAVEHRYLRRMEFIIM-SPNHENPR---EAYSFDLSYPEDQGDEAVIFSGTKVTTVKST---KNELIN-----LIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPEYFREADPSELAFKNGKSDKEIHDKLKIKIGDLQTPHHTLSLRFR 513
            +E  +++QEA+ LT WLE G      +  A+E RYLR + F I  +P H+      E YS+  +YP+       +      T + ST   KN+  +     L+R+LI+  +TL  LPRER + I+L+Y+DD TPP +QP+YF   D +    + G S   + D   I+ G L+TP+HT+ ++ R
Sbjct:   46 EEPHIRNQEAWQLTRWLEEGYLSPSFILDALEKRYLRGLVFAIYDNPEHKEQSKLLETYSYAFTYPDSTNITLEMTRNNSETNLLSTDGVKNQAYSDIQVILLRTLITLCSTLNPLPRERWITIQLYYYDDITPPDYQPKYFE--DTAGATIRPGDSSF-VSDPFVIEAGRLRTPYHTMCMKVR 226
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14100.3003.1 vs. uniprot
Match: A0A196S9B0_BLAHN (HOP1, HORMA domain containing protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S9B0_BLAHN)

HSP 1 Score: 99.4 bits (246), Expect = 7.540e-22
Identity = 62/182 (34.07%), Postives = 96/182 (52.75%), Query Frame = 1 
Query:   16 DETVVKDQEAYNLTMWLESGVFKAVEHRYLRRMEFIIMSPNHENPR----EAYSFDLSYPEDQGD--EAVIFSGTKVTTVKSTKNELINLIRSLISFGNTLGELPRERILNIKLWYFDDRT----------PPGWQPEYFREADPSELAFKNGKSDKEIHDKLKIKIGDLQTPHHTLSLRFR 513
            D+  + +QEA+ LT WLE GVF A+E RYLR + F I     +  +    E YS+  +YP+      E    +   V T    KN+ + L+R+LI+  +TL  LP ER + ++L+Y+DD T          PP +QP+YF   D +  +   G S   + D   I+ G L+TP+H + ++ R
Sbjct:   65 DQPQIHNQEAWQLTRWLEEGVFDALEKRYLRGLVFAIYDHPEDKQKSRLLETYSYAFTYPDTTNITLEVTQNNDKSVVTTDGVKNQAVILLRTLITLCSTLNPLPNERWVTMQLYYYDDVTVGSHSHHHIKPPDYQPKYFE--DTATASITPGSSTF-VADPFVIETGKLRTPYHAMCMKVR 243
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14100.3003.1 vs. uniprot
Match: A0A507F959_9FUNG (HORMA domain-containing protein n=1 Tax=Spizellomyces sp. 'palustris' TaxID=117820 RepID=A0A507F959_9FUNG)

HSP 1 Score: 92.8 bits (229), Expect = 1.220e-18
Identity = 60/164 (36.59%), Postives = 86/164 (52.44%), Query Frame = 1 
Query:   40 EAYNLTMWLESGVFKAVEHRYLRRMEF-IIMSP-NHENPREAYSFDLSYPEDQGDEAVIFSGTKVTTVKSTKNELI----NLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPEYFREADPSELAFKNGKSDKEIHDKLKIKIGDLQTPHHTLSLRFR 513
            EA  L  WLE G F A+E +YL+ M F I +SP N +   EAY+F  SYPE       I S  K      T+ E++    +++R L+    TL  LP    + ++L+Y+DD TP  ++P +FR  D  E  +         H   KIKIG ++TPHH L+L  +
Sbjct:  575 EADELMDWLERGCFDALEKQYLKTMIFGIYLSPDNPDQLVEAYTFGFSYPEKDQWCITIDSNGKQAFRLRTRGEIMKATSDMLRRLLILTQTLRPLPENAYITMRLFYYDDVTPADYEPPFFRAGDNDEKFYF-------AHRPEKIKIGQVETPHHALNLHVQ 731
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14100.3003.1 vs. uniprot
Match: A0A0L0HL36_SPIPD (HORMA domain-containing protein n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0HL36_SPIPD)

HSP 1 Score: 92.4 bits (228), Expect = 1.560e-18
Identity = 60/164 (36.59%), Postives = 86/164 (52.44%), Query Frame = 1 
Query:   40 EAYNLTMWLESGVFKAVEHRYLRRMEF-IIMSP-NHENPREAYSFDLSYPEDQGDEAVIFSGTKVTTVKSTKNELI----NLIRSLISFGNTLGELPRERILNIKLWYFDDRTPPGWQPEYFREADPSELAFKNGKSDKEIHDKLKIKIGDLQTPHHTLSLRFR 513
            EA  L  WLE G F A+E +YL+ M F I +SP N +   EAY+F  SYPE       I S  K      T+ E++    +++R L+    TL  LP    + ++L+Y+DD TP  ++P +FR  D  E  +         H   KIKIG ++TPHH L+L  +
Sbjct:   68 EADELMDWLERGCFDALEKQYLKTMIFGIYLSPDNPDQLVEAYTFGFSYPEKDQWCITIDSNGKQAFRLRTRGEIMKATSDMLRRLLILTQTLRPLPENAYITMRLFYYDDVTPAEYEPPFFRAGDNDEKFYF-------AHRPEKIKIGQVETPHHALNLHVQ 224
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14100.3003.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFC6_ECTSI1.580e-11696.07Homologue of the meiosis-specific protein HOP1 n=1... [more]
A0A6H5L5T0_9PHAE5.290e-9096.45HORMA domain-containing protein n=1 Tax=Ectocarpus... [more]
D8M718_BLAHO2.260e-2537.87HORMA domain-containing protein n=1 Tax=Blastocyst... [more]
A0A835YQL7_9STRA1.320e-2336.05HORMA domain-containing protein n=1 Tax=Tribonema ... [more]
W7TNY4_9STRA1.970e-2234.76Horma domain-containing protein n=1 Tax=Nannochlor... [more]
A0A4D9CRV9_9STRA2.140e-2234.22Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
UPI000711C5406.500e-2235.33hypothetical protein n=1 Tax=Blastocystis sp. subt... [more]
A0A196S9B0_BLAHN7.540e-2234.07HOP1, HORMA domain containing protein n=1 Tax=Blas... [more]
A0A507F959_9FUNG1.220e-1836.59HORMA domain-containing protein n=1 Tax=Spizellomy... [more]
A0A0L0HL36_SPIPD1.560e-1836.59HORMA domain-containing protein n=1 Tax=Spizellomy... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14100contigE-fasciculatus_F_contig14100:12..2803 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score355.1
Seed ortholog evalue1.9e-95
Seed eggNOG ortholog2880.D8LFC6
Preferred nameHORMAD1
KEGG rclassRC00055,RC00523
KEGG koko:K01870,ko:K03294,ko:K12778,ko:K15620,ko:K17616
KEGG TC2.A.3.2
KEGG ReactionR03656
KEGG Pathwayko00970,ko04113,map00970,map04113
KEGG ModuleM00359,M00360
GOsGO:0000003,GO:0000075,GO:0000217,GO:0000226,GO:0000228,GO:0000280,GO:0000400,GO:0000785,GO:0000790,GO:0000793,GO:0000794,GO:0000795,GO:0000800,GO:0000819,GO:0001701,GO:0001824,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004721,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006310,GO:0006464,GO:0006470,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007059,GO:0007062,GO:0007098,GO:0007127,GO:0007129,GO:0007130,GO:0007131,GO:0007135,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0008150,GO:0008152,GO:0009553,GO:0009554,GO:0009555,GO:0009556,GO:0009790,GO:0009792,GO:0009987,GO:0010564,GO:0010639,GO:0010948,GO:0016043,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0030154,GO:0030997,GO:0031023,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032886,GO:0033043,GO:0033313,GO:0034293,GO:0034641,GO:0035825,GO:0036211,GO:0040020,GO:0042138,GO:0042578,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043934,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0044703,GO:0045132,GO:0045143,GO:0045144,GO:0045786,GO:0045835,GO:0046483,GO:0046605,GO:0048229,GO:0048232,GO:0048236,GO:0048285,GO:0048468,GO:0048477,GO:0048519,GO:0048523,GO:0048609,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0051026,GO:0051128,GO:0051129,GO:0051177,GO:0051276,GO:0051321,GO:0051445,GO:0051447,GO:0051493,GO:0051598,GO:0051704,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0060629,GO:0060631,GO:0061982,GO:0061983,GO:0065007,GO:0070013,GO:0070192,GO:0070193,GO:0070507,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0097159,GO:0098813,GO:0099086,GO:0140013,GO:0140096,GO:1901360,GO:1901363,GO:1901564,GO:1903046,GO:2000241,GO:2000242
EggNOG free text desc.regulation of homologous chromosome segregation
EggNOG OGsKOG4652@1,KOG4652@2759
EC6.1.1.5
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko01009,ko03016,ko04131
Hectar predicted targeting categoryother localisation
Exons5
Model size540
Cds size537
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14100.3003.1prot_E-fasciculatus_F_contig14100.3003.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig14100 12..2802 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927902.1243556-CDS-E-fasciculatus_F_contig14100:11..1091622927902.1243556-CDS-E-fasciculatus_F_contig14100:11..109Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14100 12..109 +
1695995744.7533314-CDS-E-fasciculatus_F_contig14100:11..1091695995744.7533314-CDS-E-fasciculatus_F_contig14100:11..109Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14100 12..109 +
1622927902.165121-CDS-E-fasciculatus_F_contig14100:733..8601622927902.165121-CDS-E-fasciculatus_F_contig14100:733..860Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14100 734..860 +
1695995744.7671173-CDS-E-fasciculatus_F_contig14100:733..8601695995744.7671173-CDS-E-fasciculatus_F_contig14100:733..860Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14100 734..860 +
1622927902.1807923-CDS-E-fasciculatus_F_contig14100:1801..19121622927902.1807923-CDS-E-fasciculatus_F_contig14100:1801..1912Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14100 1802..1912 +
1695995744.7842839-CDS-E-fasciculatus_F_contig14100:1801..19121695995744.7842839-CDS-E-fasciculatus_F_contig14100:1801..1912Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14100 1802..1912 +
1622927902.1951945-CDS-E-fasciculatus_F_contig14100:2227..23921622927902.1951945-CDS-E-fasciculatus_F_contig14100:2227..2392Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14100 2228..2392 +
1695995744.7978504-CDS-E-fasciculatus_F_contig14100:2227..23921695995744.7978504-CDS-E-fasciculatus_F_contig14100:2227..2392Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14100 2228..2392 +
1622927902.2046635-CDS-E-fasciculatus_F_contig14100:2766..28021622927902.2046635-CDS-E-fasciculatus_F_contig14100:2766..2802Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14100 2767..2802 +
1695995744.8062732-CDS-E-fasciculatus_F_contig14100:2766..28021695995744.8062732-CDS-E-fasciculatus_F_contig14100:2766..2802Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14100 2767..2802 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig14100.3003.1

>prot_E-fasciculatus_F_contig14100.3003.1 ID=prot_E-fasciculatus_F_contig14100.3003.1|Name=mRNA_E-fasciculatus_F_contig14100.3003.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=179bp
RDADTDETVVKDQEAYNLTMWLESGVFKAVEHRYLRRMEFIIMSPNHENP
REAYSFDLSYPEDQGDEAVIFSGTKVTTVKSTKNELINLIRSLISFGNTL
GELPRERILNIKLWYFDDRTPPGWQPEYFREADPSELAFKNGKSDKEIHD
KLKIKIGDLQTPHHTLSLRFRGYDTHDQP
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mRNA from alignment at E-fasciculatus_F_contig14100:12..2803+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig14100.3003.1 ID=mRNA_E-fasciculatus_F_contig14100.3003.1|Name=mRNA_E-fasciculatus_F_contig14100.3003.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2792bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14100:12..2803+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CGAGACGCCGACACTGACGAGACTGTGGTGAAAGACCAAGAAGCGTACAA
CCTCACCATGTGGCTCGAGTCGGGCGTCTTCAAGGCTGTCGAGCACAGGT
CGGCGGTTTACGGTTCTTGAAAGATTTTCAACCCGGTGCGGATATAGGAT
CACGGTGGCTTCCAATGTACTTGTGGAAATAGTGCGCAAATTCGGATGGG
GCCTTTAGATCATTTTTGATCTTCGGGTCTTTGGAACGCTGAAGGAGGGC
GAAAATGAATGAGTTGCTGTGGGTTTCGGTTCGGGCCGGTACTATCCGTT
TCTTTCGAATGGTGTACCATTCGACTAGGACCTCTGCAAATGAAGTTTTC
ATTTATTATCTGATGTCATCGAGGGAGAAACGTGGCGGCTTGACTTGAGC
ACCCCGGAGGCGGCATTCACTCTGGAGTGAATATATCCCACTGGTACGAA
GTCACAAAGTATTCCTTCGAAACGGATGATATGTGGGAGTGAATACAACA
CTTGATCTACGTGTTACTTTTCCTACGCCATCCCTACTTGTACTCATTAG
TTTGTAGGTCGTACTCAGGAACCTTGTTTTCCAGGTGTTGGCGGCTCGAA
TACCATCCACAGCGCAAGTAGGAGACTCCGCTCGACCCATCCTTGGTCAA
GTTCCAACCATACTCTACTGTTTATATTTCCGAGCGGCGTTGTCCTTACT
TTGTCGCATCCATCCCTGCCAGATACCTCCGTCGGATGGAGTTCATTATC
ATGTCCCCTAACCACGAGAATCCGAGGGAAGCCTACTCCTTCGACCTTTC
TTACCCAGAGGATCAAGGGGACGAGGCCGTCATCTTCAGCGGCACCAAGG
TTTGCTTGAGCCCTTAATGGGTGCCTAAAACTTGAATCAACTTGGAGATT
GAAACCTCCGAACTGTTTCCATCATGTGGCATCGCAAGGGTTATGCCGGT
GCCTTTCCGAAGCCCTCCCGGTGATGACCAAGAAAGGATAACCTTGAAGT
GGGAACAGATGCTTAGCACACCGCGGTGATGCGCGGGGAACCCGTAAACA
GACCAATCTCCAGCAAACCACTAAACAAATAGAAAATTGGCCTCTCTTTC
GCGACTTGCTCGGAACGCAATTTACTTTGAGATCCAGGCACTAAAGAAAT
CCACAAGATCACGACAACTGCAGAAAATGAAGGATTCGCAGACCGACGCC
AAAATCGCCAAAATATGCCCTCGGAGATATTCAGAAACAATCTCGAAAGT
CATCCCGGGTGTTCAGCCGATAGACTGATATCGTACAGCAAATCTGCCAA
GCTGATACAAAACGTTTGTTGAGTGAGAATGAACATTGCAAGGACGCCTC
GTCCGTGCCGGATATTCATGGGAGACTATTTCGCGCTTCGATTTCAAGGT
AGTAGTGAGGTAGGGGCTCTTGTTAGCAGTCAACGCTTATCGAATTCATC
CTGCTGTTGACCCAACATACTATCTATATCACCTGCCCCATTCTGAACCC
TCTGCACAACTGTACTCATCGTACTGGTGTGCTATACAGGCTTGCCCTTC
CGCTGCACGCTTGAATGTGATCGTGGGCCTAGAAGTAAGTTCTGTAGTTC
AGGCGTGTACTATGCAGAGCCGGGTAGCCGGGTTGGGATGATCTCATTCC
AAAAGTGAATTATTGTGATCGCTTCAAACCCTTATTTTGATCGCTTTAAA
CCCACCAGTCTAACCGTACTGGTGTTTGAAGCGCATCCTTGGCAATGGTT
CGACGGACGCCTTGTTTTTCTCCCCCCGGTTGAACGGAAGGTGACTACCG
TCAAAAGTACCAAGAACGAGCTCATCAACCTGATCCGCTCTCTCATTTCG
TTCGGCAACACACTCGGAGAGCTGCCCAGGGAGAGGATTCTCAACATCAA
GGTTGGTTCCGAGATGCAACCTCCACGTGTCACACCGCAAATACCGCTTG
GTTGCATCTCACCTATTAATAATTGTTTTTTCGACACCATGACTAACCGA
TTGCACTGCATATGTACTAAAACCCCGGTGAACTGTGATAACTTTTACGC
TCTTCTTTTTTTTCGATTCTTTGCAATATGCGAAACGAGGCATGCAGGAG
AACGTCTCACCGCGGACCTGACCTCATAACCCATTGCCAAGGTCCATCCA
ACGCATGAAAATTCTCGAGGCTGTACCTGCTGTTACTGATTGAACCTGAT
TGTCGGAATGTTTCAGTTGTGGTACTTCGATGACCGCACGCCACCGGGGT
GGCAGCCGGAGTACTTCAGAGAGGCCGACCCCTCCGAGCTCGCCTTCAAG
AACGGAAAGTCGGACAAAGAGATCCACGACAAACTGAAGATCAAGATCGG
TGACCTCCAGACACCTCACCACACGCTCTCGGTACGCCATCGCCGCATGT
GATTGGCATGCCTCGCGTGCGCGCCCCCTTCCAAGACCCGCGGAGTGATG
TTGTCGCCGCCTCTCTGCTATAAGTGTATTCTGTAAACCGAATTATCAAC
AGCGTACAAACCTTGTACTGTAGGCGTGTGCCAGGAGGAAATTGAGTGCA
CCAAATGATGTTGGAACGCGTGACAACGTGTTGAAGCAACGAGGTAGCTT
CTCTTTGTGGAACCTCTCGGACGGTTTGGCCAGGGACCTTGTAAAATCGG
GAACGGAAACCACATCTATCTACTCAAAATACGGTTCAAGGCCTGCCGCG
GAAGCCGTGATTAACACGACAAGCATGTCGCACATTTCTCTCGAATACGG
CCCAGCTGCGCTTTAGGGGATACGACACTCACGATCAGCCGC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14100:12..2803+

>mRNA_E-fasciculatus_F_contig14100.3003.1 ID=mRNA_E-fasciculatus_F_contig14100.3003.1|Name=mRNA_E-fasciculatus_F_contig14100.3003.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1074bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14100:12..2803+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CGAGACGCCGACACTGACGAGACTGTGGTGAAAGACCAAGAAGCGTACAA
CCTCACCATGTGGCTCGAGTCGGGCGTCTTCAAGGCTGTCGAGCACAGCG
AGACGCCGACACTGACGAGACTGTGGTGAAAGACCAAGAAGCGTACAACC
TCACCATGTGGCTCGAGTCGGGCGTCTTCAAGGCTGTCGAGCACAGATAC
CTCCGTCGGATGGAGTTCATTATCATGTCCCCTAACCACGAGAATCCGAG
GGAAGCCTACTCCTTCGACCTTTCTTACCCAGAGGATCAAGGGGACGAGG
CCGTCATCTTCAGCGGCACCAAGATACCTCCGTCGGATGGAGTTCATTAT
CATGTCCCCTAACCACGAGAATCCGAGGGAAGCCTACTCCTTCGACCTTT
CTTACCCAGAGGATCAAGGGGACGAGGCCGTCATCTTCAGCGGCACCAAG
GTGACTACCGTCAAAAGTACCAAGAACGAGCTCATCAACCTGATCCGCTC
TCTCATTTCGTTCGGCAACACACTCGGAGAGCTGCCCAGGGAGAGGATTC
TCAACATCAAGGTGACTACCGTCAAAAGTACCAAGAACGAGCTCATCAAC
CTGATCCGCTCTCTCATTTCGTTCGGCAACACACTCGGAGAGCTGCCCAG
GGAGAGGATTCTCAACATCAAGTTGTGGTACTTCGATGACCGCACGCCAC
CGGGGTGGCAGCCGGAGTACTTCAGAGAGGCCGACCCCTCCGAGCTCGCC
TTCAAGAACGGAAAGTCGGACAAAGAGATCCACGACAAACTGAAGATCAA
GATCGGTGACCTCCAGACACCTCACCACACGCTCTCGTTGTGGTACTTCG
ATGACCGCACGCCACCGGGGTGGCAGCCGGAGTACTTCAGAGAGGCCGAC
CCCTCCGAGCTCGCCTTCAAGAACGGAAAGTCGGACAAAGAGATCCACGA
CAAACTGAAGATCAAGATCGGTGACCTCCAGACACCTCACCACACGCTCT
CGCTGCGCTTTAGGGGATACGACACTCACGATCAGCCGCTGCGCTTTAGG
GGATACGACACTCACGATCAGCCG
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