mRNA_E-fasciculatus_F_contig10010.30.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10010.30.1 vs. uniprot
Match: D8LI44_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI44_ECTSI) HSP 1 Score: 327 bits (837), Expect = 1.320e-112 Identity = 159/179 (88.83%), Postives = 167/179 (93.30%), Query Frame = 1
Query: 1 MWRPWAQVALLTVPWCLPAVVYTADEDLTPFNETRNWCESYRPVEYFTYVLDGLLIAGAFVLVYQMRKVRKQMNEYHLQVFQLSFLLVTGTVVLPLQHAILDHRHEIRRIWVLYHNFFMKSSFRDQLSLEELRTEFEKFAEKRMARELPDFYQVGRLPIIHHFKHHCTRRCGVYCFLTT 537
MWRPWAQVALLTVPWC PAVVYTADEDL PFNETRNWCESYRPVE FTYVLDGLLIAGAFVLVYQMRKVRKQMNEYHLQVFQL+FLLVTGTVV PLQHAILDHRHEIRRIWVLYHNFFMKSSFRDQLSLE+LRTEFEKFAE+R+A+ELPDFYQ G L II FK + TR+CG+YCF TT
Sbjct: 1 MWRPWAQVALLTVPWCFPAVVYTADEDLAPFNETRNWCESYRPVESFTYVLDGLLIAGAFVLVYQMRKVRKQMNEYHLQVFQLTFLLVTGTVVFPLQHAILDHRHEIRRIWVLYHNFFMKSSFRDQLSLEDLRTEFEKFAEQRLAKELPDFYQGGCLLIIQTFKPY-TRKCGMYCFSTT 178
BLAST of mRNA_E-fasciculatus_F_contig10010.30.1 vs. uniprot
Match: A0A6H5K1F7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F7_9PHAE) HSP 1 Score: 254 bits (650), Expect = 4.150e-77 Identity = 141/251 (56.18%), Postives = 146/251 (58.17%), Query Frame = 1
Query: 1 MWRPWAQVALLTVPWCLPAVVYTADEDLTPFNETRNWCESYRPVEYFTYVLDGLLIAGAFVLVYQMRKVRKQMNEYHLQVFQLSFLLVTGTVVLPLQHAILDHRHEIRRIWVLYHNFF-------------------------------------------------------------------------------------------------MKSSFRDQLSLEELRTEFEKFAEKRMARELPDFYQV 462
MWRPWAQVALLT+PWC PAVVYT DEDL PFNETRNWCESYRPV+ FTYVLDGLLIAGAFVLVYQMRKVRKQMNEYHLQVFQL+FLLVTGTVV PLQHAILDHRHEIRRIWVLYHN F MKSSFRDQLSLEELRTEF KFAE+R+ARELPDFYQ
Sbjct: 430 MWRPWAQVALLTLPWCFPAVVYTTDEDLAPFNETRNWCESYRPVQSFTYVLDGLLIAGAFVLVYQMRKVRKQMNEYHLQVFQLTFLLVTGTVVFPLQHAILDHRHEIRRIWVLYHNLFDSLVLFWPPIAEPMYRYLTGDEEYLHSYTHGFSTLPTPAQVQDSIPEHVVLDTELRQNILQPVTGCIAFVVFPSLHSCAVTAAIAHFPSSCFPFVSQMKSSFRDQLSLEELRTEFGKFAEERLARELPDFYQA 680
BLAST of mRNA_E-fasciculatus_F_contig10010.30.1 vs. uniprot
Match: D7G0B4_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0B4_ECTSI) HSP 1 Score: 231 bits (589), Expect = 3.000e-71 Identity = 117/194 (60.31%), Postives = 132/194 (68.04%), Query Frame = 1
Query: 1 MWRPWAQVALLTVPWCLPAVVYTADEDLTPFNETRNWCESYRPVEYFTYVLDGLLIAGAFVLVYQMRKVRKQMNEYHLQVFQLSFLLVTGTVVLPLQHAILDHRHEIRRIWVLYHNFF----------------------------------------MKSSFRDQLSLEELRTEFEKFAEKRMARELPDFYQV 462
MW PWAQV LLTVPWC+PAV YT D+ L+ FNE RNWCE YRP++ FTY+L LIA AFVLVYQMRKVRKQMNEY LQVFQL+FLL+TG+VV PLQH +LD++H IRRIWVLYHNF MK S RDQLSL+ELRTEF+KFAE RMARELP+FYQ
Sbjct: 67 MWPPWAQVLLLTVPWCIPAVAYTIDDHLSRFNEVRNWCEIYRPIDTFTYILGSSLIASAFVLVYQMRKVRKQMNEYRLQVFQLAFLLLTGSVVFPLQHLLLDNKHGIRRIWVLYHNFLDSLVLFWPPIAEPMYRYLTGDVDYLNSYTQGFSTLPTPAQMKGSLRDQLSLDELRTEFQKFAENRMARELPEFYQA 260
BLAST of mRNA_E-fasciculatus_F_contig10010.30.1 vs. uniprot
Match: D7G7J3_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J3_ECTSI) HSP 1 Score: 149 bits (377), Expect = 1.430e-38 Identity = 83/194 (42.78%), Postives = 105/194 (54.12%), Query Frame = 1
Query: 1 MWRPWAQVALLTVPWCLPAVVYTADEDLTPFNETRNWCESYRPVEYFTYVLDGLLIAGAFVLVYQMRKVRKQMNEYHLQVFQLSFLLVTGTVVLPLQHAILDHRHEIRRIWVLYHNFF----------------------------------------MKSSFRDQLSLEELRTEFEKFAEKRMARELPDFYQV 462
MW WAQVALL++PW +P V Y+ L+ FNE NWC+ ++ YV G+ I GAF L +QMR+VRKQMN Y +QV QL FL VTGT++ PL L IRR W++Y N M+S +DQLSLEELR EFEKFA+ ++ARELPDFY+
Sbjct: 97 MWPAWAQVALLSIPWLVPVVAYSIKPSLSEFNELGNWCDINVAIDTALYVYGGVPIIGAFFLSFQMRRVRKQMNFYRMQVLQLLFLFVTGTIIFPLLEESLHSN--IRRTWIMYDNIVSSIILFWPPIIEPLYRKLSGDEDYLYSYTKGFSQLPTPAQMRSCLKDQLSLEELRCEFEKFADSKVARELPDFYKA 288
BLAST of mRNA_E-fasciculatus_F_contig10010.30.1 vs. uniprot
Match: D7FTZ5_ECTSI (Signal transducer, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ5_ECTSI) HSP 1 Score: 60.5 bits (145), Expect = 1.630e-7 Identity = 54/189 (28.57%), Postives = 83/189 (43.92%), Query Frame = 1
Query: 19 QVALLTVPWCLPAVVYTADEDLTPFNETRNWCESYRPVEYFTYVLDG----LLIAGAFVLVYQMRKVRKQMNEYHLQVFQLSFLLVTGTVVLPLQHAILDHRH-EIRRIWVLYHNFFMK-------------------------SSFRDQLSLEELRTEFEKFAEKRMARELPDFY--QVGRLPIIHHF 489
QV LL+ +P ++ D DL F+ET N C + +D +++ V Q+R VRKQ NEY + LS L + + ILD H +RR+ + + F MK ++ QLS+E+LR EF ++ E ++A EL DFY + R I+ +F
Sbjct: 103 QVLLLSSTGLIPLLLAILDPDLFFFDETANSCGTSTGATRVVLGMDAFGFSMILCLWLVCARQLRWVRKQFNEYEAMKWTLSCLTILLFSYAIVVAIILDGHHCYVRRVAIAWEPFKMKLTGNAEYLYSFTQGFSEMPSPAQLKANLAQQLSVEQLRVEFRRYIEAKVAHELVDFYLDSLDREEIMEYF 291 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10010.30.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10010.30.1 >prot_E-fasciculatus_F_contig10010.30.1 ID=prot_E-fasciculatus_F_contig10010.30.1|Name=mRNA_E-fasciculatus_F_contig10010.30.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=179bp MWRPWAQVALLTVPWCLPAVVYTADEDLTPFNETRNWCESYRPVEYFTYVback to top mRNA from alignment at E-fasciculatus_F_contig10010:59..4285- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10010.30.1 ID=mRNA_E-fasciculatus_F_contig10010.30.1|Name=mRNA_E-fasciculatus_F_contig10010.30.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4227bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10010:59..4285- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10010:59..4285- >mRNA_E-fasciculatus_F_contig10010.30.1 ID=mRNA_E-fasciculatus_F_contig10010.30.1|Name=mRNA_E-fasciculatus_F_contig10010.30.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1074bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10010:59..4285- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |