mRNA_E-fasciculatus_F_contig141.3000.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig141.3000.1 vs. uniprot
Match: D7G703_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G703_ECTSI) HSP 1 Score: 459 bits (1181), Expect = 3.010e-159 Identity = 274/319 (85.89%), Postives = 280/319 (87.77%), Query Frame = 2
Query: 206 RQYRRLALILHPDKNRHPDAEAAFKKLTAAFEKLHDPAQQALCRAEAEQRNRGRPRKHREDSRSAGRPSESRREYGGGESAGARSGGNGPAEAPRWCREGEYVPEAERKREDGPDTEKRKTRPMDEFLEEFEQREKAFKEEVARAKEANAERRXXXXXXXSVQEQERMSRLRDDVLGSDGSEVEAKTASWLKFNSTXXXXXXXXXXXXXXXXXXXRNNSNGVSSPGVTCSQGQAYGAEGSGGGVAGSVGDMDGLKKGDGADAGAGRSDGSSVAGEKAAGSGFACWVCRRGFKSAKGLAHHEAKSELHEINVQLREFLSP 1162
+QYRRLALILHPDKNRHPDAEAAFKKLTAAFEKLHDPAQQALCRAEAEQRNRGRPRKHR DS S GRPSESR EYGGGE++ ARSGGNGPAEAPRWCREGEYVPEAERKRE+GPDT KTRPMDEFLEEFEQREKAFKEEVARAKE NAER XXXXX SVQEQERM+RLRDDVLGSDGSEVEAKTASWLKFNST XXXXXXXXXX R NS GV SP TCSQ QAYGAEGSG GV G GD+ LKKG GADA AGRS SSVAGEKAAGSGFACWVCRRGFKSAKGLA HEAKSELH INVQLREFLSP
Sbjct: 7 KQYRRLALILHPDKNRHPDAEAAFKKLTAAFEKLHDPAQQALCRAEAEQRNRGRPRKHRGDSSSGGRPSESRHEYGGGETSSARSGGNGPAEAPRWCREGEYVPEAERKREEGPDT--GKTRPMDEFLEEFEQREKAFKEEVARAKETNAERXXXXXXARSVQEQERMNRLRDDVLGSDGSEVEAKTASWLKFNSTTXXXXXXXXXXAGRREKAKRKNSKGVCSPVATCSQRQAYGAEGSGSGVEGREGDVGDLKKGGGADAAAGRSGDSSVAGEKAAGSGFACWVCRRGFKSAKGLAQHEAKSELHAINVQLREFLSP 323
BLAST of mRNA_E-fasciculatus_F_contig141.3000.1 vs. uniprot
Match: A0A836CJ30_9STRA (Heat shock protein 40 like protein/ DnaJ domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ30_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 2.680e-11 Identity = 36/77 (46.75%), Postives = 49/77 (63.64%), Query Frame = 2
Query: 98 SGLSGDVNAAAETLKCDGPFEVLRLIPEVYEPLEIKRQYRRLALILHPDKNRHPDAEAAFKKLTAAFEKLHDPAQQA 328
SG++ + TL+ F VL+L + +E ++ QYRRLA ++HPDKN HP AEAAF +L AF+ LHDP QA
Sbjct: 9 SGMAQQTDPVEATLRAPDSFAVLQLPLQKHEAEAVRSQYRRLARLVHPDKNAHPKAEAAFHRLAKAFDDLHDPESQA 85
BLAST of mRNA_E-fasciculatus_F_contig141.3000.1 vs. uniprot
Match: A0A2G8L6B4_STIJA (Putative dnaJ-like subfamily C member 14 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8L6B4_STIJA) HSP 1 Score: 66.6 bits (161), Expect = 4.140e-8 Identity = 36/79 (45.57%), Postives = 52/79 (65.82%), Query Frame = 2
Query: 86 GKEMSGLSGDVNAAAETL--KCDGPFEVLRLIPEVYEPLE-IKRQYRRLALILHPDKNRHPDAEAAFKKLTAAFEKLHD 313
G +G S D + A ++ D PFEVL + V + E IK++YRRLA+++HPDKN+HPDA+ AF+ L AA +K+ D
Sbjct: 1004 GNSRTGTSSDADEAIRSILNAADSPFEVLGV--SVIDTQEVIKKEYRRLAILVHPDKNKHPDAQRAFQILQAAHDKIGD 1080
BLAST of mRNA_E-fasciculatus_F_contig141.3000.1 vs. uniprot
Match: A0A022QL91_ERYGU (J domain-containing protein (Fragment) n=2 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022QL91_ERYGU) HSP 1 Score: 62.4 bits (150), Expect = 6.650e-8 Identity = 34/78 (43.59%), Postives = 48/78 (61.54%), Query Frame = 2
Query: 98 SGLSGDVNAAAETLKCDGPFEVLRLIPEVYEPLEIKRQYRRLALILHPDKNRHPDAEAAFKKLTAAFEKLHDPAQQAL 331
S N A E+ D + + I ++ + L +++QYRRLAL LHPDKNR P AEAAFK ++ A+E L DP ++L
Sbjct: 56 SAQKSSSNLATES---DNDWYGILQIEKLSDELTVRKQYRRLALSLHPDKNRFPGAEAAFKLISQAYEVLSDPKSKSL 130
BLAST of mRNA_E-fasciculatus_F_contig141.3000.1 vs. uniprot
Match: H3BHB8_LATCH (J domain-containing protein n=2 Tax=Latimeria chalumnae TaxID=7897 RepID=H3BHB8_LATCH) HSP 1 Score: 65.1 bits (157), Expect = 9.880e-8 Identity = 35/86 (40.70%), Postives = 55/86 (63.95%), Query Frame = 2
Query: 59 TPSA*RQNPGKEMSGLSGDVNAAAETLKCDGPFEVLRLIPEVYEPLEIKRQYRRLALILHPDKNRHPDAEAAFKKLTAAFEKLHDP 316
+P++ R P +E+ L G + E L PF+VLR + +E+K+ YR+LA+++HPDKN+HP AE AFK L AA++ + +P
Sbjct: 313 SPTSGRYQPDQEVERLLGMADIPEEDLN---PFQVLR-VEMTASDMELKKAYRQLAVLVHPDKNKHPRAEEAFKVLRAAWDIVSNP 394
BLAST of mRNA_E-fasciculatus_F_contig141.3000.1 vs. uniprot
Match: A0A7S1RR00_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RR00_ALECA) HSP 1 Score: 64.3 bits (155), Expect = 1.010e-7 Identity = 42/122 (34.43%), Postives = 65/122 (53.28%), Query Frame = 2
Query: 17 PCRLLSVSSSYSEPTPSA*RQNPGKEMSGLSGDVNAAAETLK-----CDGPFEVLRLIPEVYE-PLEIKRQYRRLALILHPDKNRHPDAEAAFKKLTAAFEKLHDPAQQALCRAEAEQRNRG 364
P R S++ P + R P + L + E ++ CD FE L L ++ E P +I++QYR+L+L++HPDKN H +A++AFKK+ A + L DP +Q + A QR G
Sbjct: 41 PARARGASAAEVPPKKAGPRARPAVQRRPLPSAPLSPEEAVEWVNTACD-EFEALLLPLQLEEDPTKIRKQYRQLSLLVHPDKNPHSEADSAFKKIFGAMQMLTDPMEQRVALRRARQRATG 161
BLAST of mRNA_E-fasciculatus_F_contig141.3000.1 vs. uniprot
Match: A0A7L3WS29_9GRUI (DJC14 protein (Fragment) n=1 Tax=Atlantisia rogersi TaxID=2478892 RepID=A0A7L3WS29_9GRUI) HSP 1 Score: 60.8 bits (146), Expect = 1.060e-7 Identity = 37/92 (40.22%), Postives = 54/92 (58.70%), Query Frame = 2
Query: 86 GKEMSGLSGDVNAAAETLKCDGPFEVLRLIPEVYEPLEIKRQYRRLALILHPDKNRHPDAEAAFKKLTAAFEKLHDPAQ----QALCRAEAE 349
G+E+S L E L PF+VL + E+++ YRRLA+++HPDKN+HP AEAAFK L AA++ + P + + C AE+E
Sbjct: 18 GEEVSRLLAMAEVPEEELN---PFQVLG-VEVTASDAELRKAYRRLAVLVHPDKNKHPRAEAAFKVLRAAWDIVSSPERRKEYEIKCMAESE 105
BLAST of mRNA_E-fasciculatus_F_contig141.3000.1 vs. uniprot
Match: A0A2G9HZP7_9LAMI (J domain-containing protein n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9HZP7_9LAMI) HSP 1 Score: 61.6 bits (148), Expect = 1.300e-7 Identity = 30/53 (56.60%), Postives = 40/53 (75.47%), Query Frame = 2
Query: 173 IPEVYEPLEIKRQYRRLALILHPDKNRHPDAEAAFKKLTAAFEKLHDPAQQAL 331
+ ++ + L +K+QYRRLALILHPDKNR P AEAAFK + A L DPA+++L
Sbjct: 74 VEKLADELMVKKQYRRLALILHPDKNRFPGAEAAFKLICEANAVLSDPAKKSL 126
BLAST of mRNA_E-fasciculatus_F_contig141.3000.1 vs. uniprot
Match: A0A3M6TFE1_POCDA (J domain-containing protein n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6TFE1_POCDA) HSP 1 Score: 64.7 bits (156), Expect = 1.610e-7 Identity = 37/81 (45.68%), Postives = 50/81 (61.73%), Query Frame = 2
Query: 140 KCDGPFEVLRLIPEVYEPLEIKRQYRRLALILHPDKNRHPDAEAAFKKLTAAFEKLHDPAQQALCRAEAEQRNRGRPRKHR 382
K P+ VL +P +I++QYR+LA+++HPDKN HP A+ AFK L AF+ L DP ++A AEA R R RK R
Sbjct: 711 KDSDPYSVLG-VPRDATDDDIRKQYRKLAVLIHPDKNTHPQADEAFKTLANAFDILSDPEKRANYDAEAAWRTRAEERKER 790
BLAST of mRNA_E-fasciculatus_F_contig141.3000.1 vs. uniprot
Match: A0A7S3WUM4_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WUM4_9SPIT) HSP 1 Score: 60.5 bits (145), Expect = 1.790e-7 Identity = 31/58 (53.45%), Postives = 42/58 (72.41%), Query Frame = 2
Query: 155 FEVLRLIPEVYEPL-EIKRQYRRLALILHPDKNRHPDAEAAFKKLTAAFEKLHDPAQQ 325
FEVL L E L +IK+ YR+++L++HPDKN+HP A+AAF+K+ AFE L D QQ
Sbjct: 24 FEVLGLETVYTEDLNKIKKAYRKISLVVHPDKNKHPQADAAFRKVYGAFETLSDLQQQ 81 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig141.3000.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig141.3000.1 >prot_E-fasciculatus_F_contig141.3000.1 ID=prot_E-fasciculatus_F_contig141.3000.1|Name=mRNA_E-fasciculatus_F_contig141.3000.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=357bp MSGLSGDVNAAAETLKCDGPFEVLRLIPEVYEPLEIKRQYRRLALILHPDback to top mRNA from alignment at E-fasciculatus_F_contig141:30491..33650- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig141.3000.1 ID=mRNA_E-fasciculatus_F_contig141.3000.1|Name=mRNA_E-fasciculatus_F_contig141.3000.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3160bp|location=Sequence derived from alignment at E-fasciculatus_F_contig141:30491..33650- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig141:30491..33650- >mRNA_E-fasciculatus_F_contig141.3000.1 ID=mRNA_E-fasciculatus_F_contig141.3000.1|Name=mRNA_E-fasciculatus_F_contig141.3000.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2142bp|location=Sequence derived from alignment at E-fasciculatus_F_contig141:30491..33650- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |