prot_E-fasciculatus_F_contig14088.2987.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14088.2987.1
Unique Nameprot_E-fasciculatus_F_contig14088.2987.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length325
Homology
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BLAST of mRNA_E-fasciculatus_F_contig14088.2987.1 vs. uniprot
Match: A0A6H5LCQ5_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCQ5_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 1.050e-23
Identity = 75/120 (62.50%), Postives = 81/120 (67.50%), Query Frame = 0 
Query:  104 VAAVEGTVVKRRGEGGEHEAGXXAAAXXXXXXXSGLAVPGAKRLRPSLPGNSSFSDGDGGGQLPTTQHGG-GVSPRDGEAPAISTGLSSSPL--TGISRPTASGDVMTSSPFSPQPAATA 220
            VAAVEGT +KRRG+GGEH  G             GLA PGAKRLRPS P NSSFSDGDG  Q+PT QHGG   +PRDGEAPAIST LSSSP   T ISRPTAS   +   PFS Q + TA
Sbjct:  904 VAAVEGTAIKRRGDGGEHVGGGCG----------GLAAPGAKRLRPSHPENSSFSDGDGDEQVPTMQHGGLSPNPRDGEAPAISTALSSSPPPPTSISRPTASAPQLP--PFSGQASPTA 1011
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BLAST of mRNA_E-fasciculatus_F_contig14088.2987.1 vs. uniprot
Match: D7FZ71_ECTSI (AP2/ERF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ71_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 1.350e-22
Identity = 91/180 (50.56%), Postives = 95/180 (52.78%), Query Frame = 0 
Query:   25 PPPRVASFPSVATLAAVXXXXGLDSAGGGIEGVGXXXXXXSFRGTAEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXGSLVAAVEGTVVKRRGEGGEHEAGXXAAAXXXXXXXSGLAVPGAKRLRPSLPGNSSFSDGDGGGQLPTTQHGG-GVSPRDGEAPAISTGLSSSPL--TGISRPT 201
            PPPRVASFPSVATLAAV                                                              VAAVEGT +KRRG+ GEH        XXXXXXX  LA PGAKRLRPSLPGNSSFSDGDGG Q+PTTQHGG   +PRD EAPAIST LSSSP   T ISRPT
Sbjct:  431 PPPRVASFPSVATLAAV-------------------------------------------------------------AVAAVEGTAIKRRGDDGEH------VXXXXXXXXXXLAAPGAKRLRPSLPGNSSFSDGDGGEQVPTTQHGGVSPNPRDEEAPAISTALSSSPPPPTSISRPT 543
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14088.2987.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LCQ5_9PHAE1.050e-2362.50AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
D7FZ71_ECTSI1.350e-2250.56AP2/ERF domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..324
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14088contigE-fasciculatus_F_contig14088:1929..2903 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14088.2987.1mRNA_E-fasciculatus_F_contig14088.2987.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14088 1929..2903 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14088.2987.1 ID=prot_E-fasciculatus_F_contig14088.2987.1|Name=mRNA_E-fasciculatus_F_contig14088.2987.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=325bp
AAAAFPSLGGQLAAVSAAASNGPRPPPRVASFPSVATLAAVAAAAGLDSA
GGGIEGVGGGGGGGSFRGTAEAAAMAAAVAAVEGTAVDGGGGHGAGAGVG
GSLVAAVEGTVVKRRGEGGEHEAGAGAAAGAGAGFGSGLAVPGAKRLRPS
LPGNSSFSDGDGGGQLPTTQHGGGVSPRDGEAPAISTGLSSSPLTGISRP
TASGDVMTSSPFSPQPAATAVDGGGGDLGSGRAAAAAVAATAALSKPTPS
AEGAAAGFGSVGETPAVVERSGGGGGGGDGGGAATTTVAAPSSDSAAPLP
PPSAAAAVTAVASMAQPKAAAIAE*
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