mRNA_E-fasciculatus_F_contig14086.2985.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14086.2985.1 vs. uniprot
Match: A0A6H5L4A3_9PHAE (TYR_PHOSPHATASE_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4A3_9PHAE) HSP 1 Score: 365 bits (936), Expect = 1.350e-118 Identity = 312/394 (79.19%), Postives = 318/394 (80.71%), Query Frame = 1
Query: 1 LQLAAQLARRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQVRRVIGRVIAHRRSLVT---PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVGGRRAWVRGRRQAFAQAPNGVGEEVSGWLDDENNEAEGDGLSDLQGGKKFKAGGAGQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------MPRRKSFTEPYSKDDPSRGTRMSRARRKSAPGKPPADVLAAXXXXXXXXXXXXXXXXXXSGKEDVCDVSTKSLLSLSPAKGINCRQTSSSKAVCSTPGDDAAAS-SPGSCTGVERCVTRSSGXXXXXGGTSCSAR 1152
LQLAAQLA RLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGL ADEAMERCQHVHDVRRIPISVGSPQTE+QRQQVRRVIGRVIAHRRSLV P XXXXXXXXXXXXXXXXXXXXXXXXXXXX TVGGRRAWVRGRRQAFAQAPNGVGE+VSGWLDD+N E EGDGLSDLQGGKK KAG AGQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MPRRKSFTEPYSKD+PSRG RMSRARRKSAPGKPPADVLAA XXXXXXXXXXXXXXXXX LL LSPAKGINCRQTSS+ A CSTPGDDAAA+ SPGSCTGVERCVTRSSG GGTSC AR
Sbjct: 195 LQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLGADEAMERCQHVHDVRRIPISVGSPQTESQRQQVRRVIGRVIAHRRSLVPSSPPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXISGSVLSPESSRKKEAGRGATTAASAPTTVGGRRAWVRGRRQAFAQAPNGVGEDVSGWLDDDN-EVEGDGLSDLQGGKKLKAG-AGQTSAHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPRRKSFTEPYSKDEPSRGMRMSRARRKSAPGKPPADVLAARXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LLLLSPAKGINCRQTSSN-AACSTPGDDAAAAPSPGSCTGVERCVTRSSGG----GGTSCRAR 579
BLAST of mRNA_E-fasciculatus_F_contig14086.2985.1 vs. uniprot
Match: D7G3T8_ECTSI (TYR_PHOSPHATASE_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T8_ECTSI) HSP 1 Score: 153 bits (386), Expect = 2.840e-40 Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 1
Query: 1 LQLAAQLARRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQ 225
LQLAAQLA RLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQ
Sbjct: 195 LQLAAQLAGRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQ 269
BLAST of mRNA_E-fasciculatus_F_contig14086.2985.1 vs. uniprot
Match: A0A7S3YH03_HETAK (Protein-tyrosine-phosphatase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YH03_HETAK) HSP 1 Score: 127 bits (320), Expect = 6.320e-31 Identity = 56/78 (71.79%), Postives = 69/78 (88.46%), Query Frame = 1
Query: 7 LAAQLARRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQVRRVI 240
LA L LA+GEVMYLHCWGGHGRTGTV+C++LHLMY +AD+A ERCQ++HD+RRIP++VGSPQT+ QR+QVRRVI
Sbjct: 148 LAHHLVSLLAKGEVMYLHCWGGHGRTGTVICLLLHLMYNYTADQAFERCQYLHDLRRIPVAVGSPQTQGQREQVRRVI 225
BLAST of mRNA_E-fasciculatus_F_contig14086.2985.1 vs. uniprot
Match: A0A6C0F341_9ZZZZ (TYR_PHOSPHATASE_2 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0F341_9ZZZZ) HSP 1 Score: 115 bits (288), Expect = 3.520e-26 Identity = 51/78 (65.38%), Postives = 65/78 (83.33%), Query Frame = 1
Query: 7 LAAQLARRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQVRRVI 240
LA L + + GEV+YLHCWGGHGRTG +VC+MLHLMYGL+A+EA+ERCQ +HD+R++PI V SPQT Q+ QVRR+I
Sbjct: 176 LAKDLVKAIHDGEVVYLHCWGGHGRTGIMVCLMLHLMYGLTANEALERCQFLHDIRKMPIIVSSPQTFRQKDQVRRII 253
BLAST of mRNA_E-fasciculatus_F_contig14086.2985.1 vs. uniprot
Match: A0A7S2WJS5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJS5_9STRA) HSP 1 Score: 108 bits (271), Expect = 4.180e-25 Identity = 47/79 (59.49%), Postives = 65/79 (82.28%), Query Frame = 1
Query: 4 QLAAQLARRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQVRRVI 240
+LA L RR+ R EV+Y+HCWGGHGRTG++VCI+L+++Y L ++EA++ CQ VHD+RRIP+ V SPQ AQR QVRR++
Sbjct: 59 KLALDLTRRMQRNEVIYMHCWGGHGRTGSLVCILLNIIYKLGSEEAIQYCQFVHDLRRIPMDVPSPQKPAQRNQVRRIV 137
BLAST of mRNA_E-fasciculatus_F_contig14086.2985.1 vs. uniprot
Match: A0A7S3M379_9STRA (Protein-tyrosine-phosphatase (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M379_9STRA) HSP 1 Score: 114 bits (284), Expect = 7.970e-25 Identity = 52/80 (65.00%), Postives = 65/80 (81.25%), Query Frame = 1
Query: 1 LQLAAQLARRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQVRRVI 240
L LA +L + ++ GEV+YLHCWGGHGRTGTVVCIML+L+YGL+ +A + CQ VHD+R P+ VGSPQT+ QRQQV RVI
Sbjct: 36 LALAQKLTKDISEGEVIYLHCWGGHGRTGTVVCIMLYLLYGLNPKQAFDYCQAVHDLRTCPVEVGSPQTQTQRQQVVRVI 115
BLAST of mRNA_E-fasciculatus_F_contig14086.2985.1 vs. uniprot
Match: F0Y9Z0_AURAN (Expressed protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9Z0_AURAN) HSP 1 Score: 110 bits (276), Expect = 1.170e-23 Identity = 54/86 (62.79%), Postives = 63/86 (73.26%), Query Frame = 1
Query: 10 AAQLARRL-ARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQVRRVIGRVIAHRR 264
A LARR+ EV+YLHCWGGHGR GTVVC++LH +Y A AM RCQ VHD+RR+PI VGSPQT+ QR QV RVI R I R+
Sbjct: 93 AVALARRIKTTNEVVYLHCWGGHGRAGTVVCLLLHFLYDQDAASAMMRCQFVHDLRRVPIVVGSPQTQTQRDQVSRVIARSIVSRK 178
BLAST of mRNA_E-fasciculatus_F_contig14086.2985.1 vs. uniprot
Match: A0A8J2T0D3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T0D3_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.650e-21 Identity = 50/80 (62.50%), Postives = 62/80 (77.50%), Query Frame = 1
Query: 19 LARRL-ARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQVRRVIGRVIA 255
LA RL EV+YLHCWGGHGR GT+ C++LH +YGL+A +AM RCQ VHD+RR+PI VGSPQT+ QR QV RV+ +A
Sbjct: 161 LADRLRCTDEVIYLHCWGGHGRAGTITCLLLHWLYGLNALDAMARCQFVHDLRRVPIVVGSPQTQTQRDQVCRVVASSLA 240
BLAST of mRNA_E-fasciculatus_F_contig14086.2985.1 vs. uniprot
Match: A0A5A8C9N1_CAFRO (TYR_PHOSPHATASE_2 domain-containing protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C9N1_CAFRO) HSP 1 Score: 102 bits (255), Expect = 1.820e-21 Identity = 50/80 (62.50%), Postives = 59/80 (73.75%), Query Frame = 1
Query: 1 LQLAAQLARRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQVRRVI 240
L+LA L RLA GE +Y+HCWGGHGRTGTVV IML LMYGL A M QHVHD+R P+ VG+PQT QR+QV R++
Sbjct: 168 LELAHDLVNRLASGENLYVHCWGGHGRTGTVVSIMLGLMYGLPARNCMAYLQHVHDLRICPMDVGTPQTSQQRRQVIRIL 247
BLAST of mRNA_E-fasciculatus_F_contig14086.2985.1 vs. uniprot
Match: A0A7S3NIH7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIH7_9STRA) HSP 1 Score: 103 bits (256), Expect = 6.950e-21 Identity = 50/88 (56.82%), Postives = 62/88 (70.45%), Query Frame = 1
Query: 22 ARRLAR-----GEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERCQHVHDVRRIPISVGSPQTEAQRQQVRRVIGRVIAHRRSL 270
ARRLAR +++YLHCWGGHGR GT+ C++ HL+YGL AM RCQ VHD R+IPI+VGSPQT Q QV R+I R ++SL
Sbjct: 202 ARRLARRIRDTDQIIYLHCWGGHGRAGTITCLLFHLLYGLDDKTAMRRCQLVHDCRKIPINVGSPQTRTQCDQVSRIIHRWTKKQQSL 289 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14086.2985.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14086.2985.1 >prot_E-fasciculatus_F_contig14086.2985.1 ID=prot_E-fasciculatus_F_contig14086.2985.1|Name=mRNA_E-fasciculatus_F_contig14086.2985.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=385bp LQLAAQLARRLARGEVMYLHCWGGHGRTGTVVCIMLHLMYGLSADEAMERback to top mRNA from alignment at E-fasciculatus_F_contig14086:616..1770+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14086.2985.1 ID=mRNA_E-fasciculatus_F_contig14086.2985.1|Name=mRNA_E-fasciculatus_F_contig14086.2985.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1155bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14086:616..1770+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14086:616..1770+ >mRNA_E-fasciculatus_F_contig14086.2985.1 ID=mRNA_E-fasciculatus_F_contig14086.2985.1|Name=mRNA_E-fasciculatus_F_contig14086.2985.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2310bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14086:616..1770+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |