mRNA_E-fasciculatus_F_contig14083.2983.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14083.2983.1 vs. uniprot
Match: D8LFD9_ECTSI (UBP-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFD9_ECTSI) HSP 1 Score: 433 bits (1114), Expect = 2.380e-138 Identity = 340/514 (66.15%), Postives = 348/514 (67.70%), Query Frame = 1
Query: 1 FWQ-ADAASFVERVNGLSLPGRGVVKALFLSGAEVVPA-ARSGRGGGDGGADANSFRQXXXXXXXXXXXXXXXXXXXXXGAKDAATLQGSGSEESKSSWSGRAGQGGRSSCSPPRDRDS-RARLLAGAAGGSPRGRLAVRAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-EGGSDGGSGCSVSPPPVWQEG-EMFLPLSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGRTELPPCPVCIDRLDPAVSGIPSARSGGKSSSSGDRGRRGSDGGGITGAILGSCSHRGCNSRGEKVGEALAASXXXXXXXXXXXAGSAPGPKNGVRDNDSAGHDPGSKKQEGQKTGLGQGASPTGQASGGDKHGGRGPRWEGERTRQGGGAGATPMGVLGQGGEEGWRGEGRGGGGGAGDPALNVTIWKGSNCRVCRSLNVALNGAPGELCCETCHIAHNLWICMVCGHIGCGRYTGEHASRHFRLSSHNY 1527
FW ADA SFVERVNGLSLPGRGVVKALFLSGAEV+PA XXXXXXXXXX XXXXX GAKD ATLQGSGSEESKSSWSGRAGQ GRSSCSPPRDRDS RARLLAGA XXXXXXXXX EGGSDGGSG SVSPPPVWQ+G EMFL LSGXXXXXXX XXXXXXXXXXXXX TELPPCPVCIDRLDPAVSGIP ARSG KSS ITGAILGSC HR CNSRG K G XXXXXXXXXXX GS+PGPK V D+DSAGHDPG +K+E ASPTGQA GGDKH GRGPRWEGERTRQGGG+GATPM L GGEEG RGEGR G GG G PALNVT+WKGSNCRVCRSLNVALNGAPGELCCETC IAHNLWICMVCGHIGCGRYTGEHASRHFRLS H Y
Sbjct: 216 FWDVADAVSFVERVNGLSLPGRGVVKALFLSGAEVIPAPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGVAPXXXXXSGAKDGATLQGSGSEESKSSWSGRAGQAGRSSCSPPRDRDSSRARLLAGATXXXXXXXXXXXXXXXXXXXXXXGEGRATYARPGPASASPPPVGRETEAEERKGRGCGEGGSDGGSG-SVSPPPVWQQGGEMFLALSGXXXXXXXRVAWGRGGAGAVAHRNPNGDGRXXXXXXXXXXXXX------TELPPCPVCIDRLDPAVSGIPLARSGSKSSXXXXXXXXXXXXX-ITGAILGSCRHRECNSRGGKAG--XXXXXXXXXXXXXXXXGSSPGPKCSVSDDDSAGHDPGCEKKE---------ASPTGQALGGDKHRGRGPRWEGERTRQGGGSGATPMDALRPGGEEGLRGEGREGAGGGGGPALNVTMWKGSNCRVCRSLNVALNGAPGELCCETCRIAHNLWICMVCGHIGCGRYTGEHASRHFRLSGHTY 710
BLAST of mRNA_E-fasciculatus_F_contig14083.2983.1 vs. uniprot
Match: A0A835YX21_9STRA (UBP-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX21_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 2.330e-13 Identity = 39/80 (48.75%), Postives = 48/80 (60.00%), Query Frame = 1
Query: 1324 NVTIWKGSNCRVCRSL-------NVALNGAPG-----ELCCETCHIAHNLWICMVCGHIGCGRYTGEHASRHFRLSSHNY 1527
++ W+GS CRVC L + ++ GA G + CE C IAHNLW+CMVCGHIGCGRYT EHA H + H Y
Sbjct: 305 SLDAWEGSTCRVCSYLQGSGWESSGSVWGAGGLFNAPPVACEACRIAHNLWVCMVCGHIGCGRYTAEHAKAHHAQTGHTY 384
BLAST of mRNA_E-fasciculatus_F_contig14083.2983.1 vs. uniprot
Match: K3W6P2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6P2_GLOUD) HSP 1 Score: 82.4 bits (202), Expect = 5.690e-13 Identity = 33/64 (51.56%), Postives = 45/64 (70.31%), Query Frame = 1
Query: 1336 WKGSNCRVCRSLNVALNGAPGELCCETCHIAHNLWICMVCGHIGCGRYTGEHASRHFRLSSHNY 1527
W+GS+C VCR + + A CE CH +LWIC++CGH+GCGRY+GEHA +HF+ +SH Y
Sbjct: 286 WEGSSCPVCRYSHGDIVSA-----CEVCHTTEHLWICLICGHVGCGRYSGEHAKQHFQETSHTY 344
BLAST of mRNA_E-fasciculatus_F_contig14083.2983.1 vs. uniprot
Match: A0A662YFP2_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YFP2_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 1.610e-12 Identity = 31/64 (48.44%), Postives = 44/64 (68.75%), Query Frame = 1
Query: 1336 WKGSNCRVCRSLNVALNGAPGELCCETCHIAHNLWICMVCGHIGCGRYTGEHASRHFRLSSHNY 1527
W+GS+C VCR + + A CE CH +LWIC++CGH+GCGRY+GEHA +H++ + H Y
Sbjct: 263 WEGSSCPVCRYSHGDIGSA-----CEVCHTTEHLWICLICGHVGCGRYSGEHAKQHYQETLHTY 321
BLAST of mRNA_E-fasciculatus_F_contig14083.2983.1 vs. uniprot
Match: A0A662WWK2_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WWK2_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 2.880e-12 Identity = 31/64 (48.44%), Postives = 44/64 (68.75%), Query Frame = 1
Query: 1336 WKGSNCRVCRSLNVALNGAPGELCCETCHIAHNLWICMVCGHIGCGRYTGEHASRHFRLSSHNY 1527
W+GS+C VCR + + A CE CH +LWIC++CGH+GCGRY+GEHA +H++ + H Y
Sbjct: 255 WEGSSCPVCRYSHGDIGSA-----CEVCHTTEHLWICLICGHVGCGRYSGEHAKQHYQETLHTY 313
BLAST of mRNA_E-fasciculatus_F_contig14083.2983.1 vs. uniprot
Match: A0A0J8RJ04_COCIT (Zinc finger domain-containing protein n=1 Tax=Coccidioides immitis H538.4 TaxID=396776 RepID=A0A0J8RJ04_COCIT) HSP 1 Score: 79.3 bits (194), Expect = 5.120e-12 Identity = 35/73 (47.95%), Postives = 44/73 (60.27%), Query Frame = 1
Query: 1336 WKGSNCRVCR---------SLNVALNGAPGELCCETCHIAHNLWICMVCGHIGCGRYTGEHASRHFRLSSHNY 1527
WKGS C VCR + N L+ P E C CH NLWIC++CG+IGCGRY G HA HF+ +SH++
Sbjct: 242 WKGSGCPVCRYTQEDLGKRAFNFGLDEGPAE--CSVCHAEENLWICLICGNIGCGRYDGAHAFAHFQETSHSF 312
BLAST of mRNA_E-fasciculatus_F_contig14083.2983.1 vs. uniprot
Match: E9DIZ0_COCPS (RING and UBP finger domain-containing protein n=6 Tax=Coccidioides TaxID=5500 RepID=E9DIZ0_COCPS) HSP 1 Score: 79.3 bits (194), Expect = 6.670e-12 Identity = 35/73 (47.95%), Postives = 44/73 (60.27%), Query Frame = 1
Query: 1336 WKGSNCRVCR---------SLNVALNGAPGELCCETCHIAHNLWICMVCGHIGCGRYTGEHASRHFRLSSHNY 1527
WKGS C VCR + N L+ P E C CH NLWIC++CG+IGCGRY G HA HF+ +SH++
Sbjct: 419 WKGSGCPVCRYTQEDLGKRAFNFGLDEGPAE--CSVCHAEENLWICLICGNIGCGRYDGAHAFAHFQETSHSF 489
BLAST of mRNA_E-fasciculatus_F_contig14083.2983.1 vs. uniprot
Match: A0A5D6XNV3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XNV3_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 7.270e-12 Identity = 31/64 (48.44%), Postives = 44/64 (68.75%), Query Frame = 1
Query: 1336 WKGSNCRVCRSLNVALNGAPGELCCETCHIAHNLWICMVCGHIGCGRYTGEHASRHFRLSSHNY 1527
W+GS+C VCR + + A CE CH +LWIC++CGH+GCGRY+GEHA +H++ + H Y
Sbjct: 285 WEGSSCPVCRYSHGDIVSA-----CEVCHTTEHLWICLICGHVGCGRYSGEHAKQHYQETLHTY 343
BLAST of mRNA_E-fasciculatus_F_contig14083.2983.1 vs. uniprot
Match: A0A022WCD3_TRIRU (Uncharacterized protein n=3 Tax=Trichophyton TaxID=5550 RepID=A0A022WCD3_TRIRU) HSP 1 Score: 77.8 bits (190), Expect = 7.350e-12 Identity = 34/73 (46.58%), Postives = 46/73 (63.01%), Query Frame = 1
Query: 1336 WKGSNCRVCR---------SLNVALNGAPGELCCETCHIAHNLWICMVCGHIGCGRYTGEHASRHFRLSSHNY 1527
WKGS C VCR ++N A++ P E C CH NLWIC++CG+IGCGRY G HA H++ +SH++
Sbjct: 63 WKGSGCPVCRYTQDDLGKRNVNFAMDEGPSE--CSVCHSEVNLWICLICGNIGCGRYDGAHAFDHYKETSHSF 133
BLAST of mRNA_E-fasciculatus_F_contig14083.2983.1 vs. uniprot
Match: C5FUR0_ARTOC (RING finger protein n=1 Tax=Arthroderma otae (strain ATCC MYA-4605 / CBS 113480) TaxID=554155 RepID=C5FUR0_ARTOC) HSP 1 Score: 79.0 bits (193), Expect = 8.620e-12 Identity = 34/73 (46.58%), Postives = 47/73 (64.38%), Query Frame = 1
Query: 1336 WKGSNCRVCR---------SLNVALNGAPGELCCETCHIAHNLWICMVCGHIGCGRYTGEHASRHFRLSSHNY 1527
WKGS C VCR ++N+A++ P E C CH NLWIC++CG+IGCGRY G HA H++ +SH++
Sbjct: 393 WKGSGCPVCRYTQDDLGKRNVNLAVDECPSE--CSVCHSEANLWICLICGNIGCGRYDGAHAFDHYKQTSHSF 463 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14083.2983.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14083.2983.1 >prot_E-fasciculatus_F_contig14083.2983.1 ID=prot_E-fasciculatus_F_contig14083.2983.1|Name=mRNA_E-fasciculatus_F_contig14083.2983.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=511bp FWQADAASFVERVNGLSLPGRGVVKALFLSGAEVVPAARSGRGGGDGGADback to top mRNA from alignment at E-fasciculatus_F_contig14083:597..3333- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14083.2983.1 ID=mRNA_E-fasciculatus_F_contig14083.2983.1|Name=mRNA_E-fasciculatus_F_contig14083.2983.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2737bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14083:597..3333- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14083:597..3333- >mRNA_E-fasciculatus_F_contig14083.2983.1 ID=mRNA_E-fasciculatus_F_contig14083.2983.1|Name=mRNA_E-fasciculatus_F_contig14083.2983.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3066bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14083:597..3333- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |