mRNA_E-fasciculatus_F_contig14079.2980.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig14079.2980.1
Unique NamemRNA_E-fasciculatus_F_contig14079.2980.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig14079.2980.1 vs. uniprot
Match: D7G213_ECTSI (TLC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G213_ECTSI)

HSP 1 Score: 307 bits (786), Expect = 2.700e-102
Identity = 146/154 (94.81%), Postives = 149/154 (96.75%), Query Frame = 1 
Query:    1 EDWPLGNGADGLDQFYHVAMGVYWHFILFQFWDTRRSDFMQMLVHHVATISLLAFSWLLSLVRIGALIMLCHDVADIFMETAKLFNYSQKRFHWCHLAADGFFFAFAGVFGFTRLYIFPKYLVLSVWRAAVLSEVMRHFFMGQLCTLLVLHVFW 462
            EDWPLGNG DGLDQFYHVAMGVYWHFI+FQFWDTRRSDF QMLVHHVATISLL FSWLLSLVRIGALIMLCHDVADIFMETAKLFNYSQKR+HWCHLAADGFFF FAGVFGF+RLYIFPKYLVLSVWRAAVLSEVMRHFF GQLCTLLVLHVFW
Sbjct:  172 EDWPLGNGMDGLDQFYHVAMGVYWHFIIFQFWDTRRSDFAQMLVHHVATISLLTFSWLLSLVRIGALIMLCHDVADIFMETAKLFNYSQKRYHWCHLAADGFFFVFAGVFGFSRLYIFPKYLVLSVWRAAVLSEVMRHFFTGQLCTLLVLHVFW 325
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BLAST of mRNA_E-fasciculatus_F_contig14079.2980.1 vs. uniprot
Match: I2CPH2_NANGC (Lag1 longevity assurance 5-like protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPH2_NANGC)

HSP 1 Score: 115 bits (289), Expect = 1.710e-28
Identity = 64/144 (44.44%), Postives = 85/144 (59.03%), Query Frame = 1 
Query:   43 FYHVAMGVYWHFILFQFWDTRRSDFMQMLVHHVATISLLAFSWLLSLVRIGALIMLCHDVADIFMETAKLFNYSQKRFHWCHLAADGFFFAFAGVFGFTRLYIFPKYLVLSVWRAA---VLSEVM-RHFFMGQLCTLLVLHVFW 462
            +Y   +G+Y H   +QF DTRRSDF +M VHH ATI L+ FSWL   +RIG L+ML HD +D+F+ETAK+FNY  +   W     D  F  FA  F  TRL I+P ++V S    A   +  E +  + F   L  L +LH+FW
Sbjct:   77 YYTFQLGIYLHLSAYQFIDTRRSDFWEMFVHHAATIFLIVFSWLSCFIRIGTLVMLIHDPSDVFLETAKIFNYISRARPWAQAVTDLLFVCFALTFFVTRLVIYPFWIVHSTLTHAHTIIGGEYLGMYVFYAMLFVLQLLHIFW 220
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BLAST of mRNA_E-fasciculatus_F_contig14079.2980.1 vs. uniprot
Match: A0A6P4ZYW6_BRABE (LOW QUALITY PROTEIN: ceramide synthase 6-like n=5 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4ZYW6_BRABE)

HSP 1 Score: 116 bits (291), Expect = 2.670e-28
Identity = 67/156 (42.95%), Postives = 93/156 (59.62%), Query Frame = 1 
Query:    4 DWPLGNGADGLDQFYHVAMGVYWHFILFQFWDTRRSDFMQMLVHHVATISLLAFSWLLSLVRIGALIMLCHDVADIFMETAKLFNYSQKRFHWCHLAADGFFFAFAGVFGFTRLYIFPKYLVLSVWRAAVLSEVM---RHFFMGQLCTLLVLHVFW 462
            D+P     D +   Y V +G YW  I   F D +R DF QM+VHHVATI L++FSW+ + VRIG+LI++ HD+ADIF+E AKL NY++     C    D  F  FA VF  +RL+I+P +LV S    ++  + +    + F G L  L  LH+FW
Sbjct:  168 DFPDHPLTDDITYLYIVELGFYWSLIFSLFRDVKRKDFWQMVVHHVATIMLVSFSWVANFVRIGSLILVTHDMADIFLEAAKLLNYAK-----CQALCDACFVVFAIVFFVSRLFIYPYWLVYSAATDSIADKGVFPAYYVFNGLLLLLQCLHIFW 318
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BLAST of mRNA_E-fasciculatus_F_contig14079.2980.1 vs. uniprot
Match: A0A4D9CWH6_9STRA (TLC domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWH6_9STRA)

HSP 1 Score: 112 bits (279), Expect = 2.000e-26
Identity = 61/156 (39.10%), Postives = 91/156 (58.33%), Query Frame = 1 
Query:    7 WPLGNGADGLDQFYHVAMGVYWHFILFQFWDTRRSDFMQMLVHHVATISLLAFSWLLSLVRIGALIMLCHDVADIFMETAKLFNYSQKRFHWCHLAADGFFFAFAGVFGFTRLYIFPKYLVLSVWRAAVLSEVMRHFFMGQL----CTLLVLHVFW 462
            +P  +    +  +Y +  G+Y H ++F F++ RRSDF  +L+HH+AT+SL++ S+L + +RIGAL+M+ HD+AD F+E AKLFNY      W     D FF AFA VF  TR  +FP Y++ +           +   +G L    C L  LH+FW
Sbjct:  195 YPFADLPSEVFVYYVMEFGIYIHELIFLFFEARRSDFFALLLHHIATLSLISGSYLFNYIRIGALVMVLHDLADSFLELAKLFNYVTNVHTWAQGVTDFFFVAFALVFCVTRCLLFPLYILRNTLTVPQQYLYQQELSVGSLNVFLCVLYCLHLFW 350
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BLAST of mRNA_E-fasciculatus_F_contig14079.2980.1 vs. uniprot
Match: UPI001E273A05 (ceramide synthase 6-like n=1 Tax=Melitaea cinxia TaxID=113334 RepID=UPI001E273A05)

HSP 1 Score: 107 bits (266), Expect = 1.650e-25
Identity = 60/143 (41.96%), Postives = 83/143 (58.04%), Query Frame = 1 
Query:   43 FYHVAMGVYWHFILFQFWDTRRSDFMQMLVHHVATISLLAFSWLLSLVRIGALIMLCHDVADIFMETAKLFNYSQKRFHWCHLAADGFFFAFAGVFGFTRLYIFPKYLVLSVW-RAAVLSEVMR--HFFMGQLCTLLVLHVFW 462
            +Y ++   YW   + QFWD RR DF QM VHH+ATI+L+ FSW+ +L RIG L++L HD ADIF+E AK   Y+  +        D  F  F  ++  TRL I+P Y++ S   RA +L  +    + F   LC LL LH+ W
Sbjct:   74 YYMISSAFYWSLTISQFWDVRRKDFWQMFVHHIATIALICFSWVCNLHRIGTLVLLVHDCADIFLEAAKAAKYAAYQ-----KICDAIFAVFTVIWIITRLGIYPLYIIWSTSIRAPMLLPMFAAYYIFNSLLCLLLALHMVW 211
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BLAST of mRNA_E-fasciculatus_F_contig14079.2980.1 vs. uniprot
Match: R4G7Z2_RHOPR (Protein transporter of the tram translocating chain-associating membrane superfamily n=1 Tax=Rhodnius prolixus TaxID=13249 RepID=R4G7Z2_RHOPR)

HSP 1 Score: 109 bits (272), Expect = 1.660e-25
Identity = 60/144 (41.67%), Postives = 87/144 (60.42%), Query Frame = 1 
Query:   43 FYHVAMGVYWHFILFQFWDTRRSDFMQMLVHHVATISLLAFSWLLSLVRIGALIMLCHDVADIFMETAKLFNYSQKRFHWCHLAADGFFFAFAGVFGFTRLYIFPKYLVLSVW-RAAVLSEVM---RHFFMGQLCTLLVLHVFW 462
            +Y +++  YW   + QF D +R DF QM VHH+ATI L+AFSW+ +L+R+G L++L HD ADIF+E AK+  Y+  +        D FF  F  ++  TRL +FP +++ S   RA  +   M    +FF G L  LL LH+FW
Sbjct:  183 YYMISLSFYWSLAISQFRDVKRKDFWQMFVHHIATILLMAFSWVCNLIRVGTLVLLVHDCADIFLEAAKMAKYANYQ-----KVCDAFFGIFTIIWLITRLVVFPCWILYSTTIRAPRIVNTMFPAYYFFNGLLLLLLALHIFW 321
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BLAST of mRNA_E-fasciculatus_F_contig14079.2980.1 vs. uniprot
Match: A0A8J2JAJ9_9HEXA (Hypothetical protein n=1 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2JAJ9_9HEXA)

HSP 1 Score: 107 bits (268), Expect = 6.390e-25
Identity = 63/157 (40.13%), Postives = 88/157 (56.05%), Query Frame = 1 
Query:    4 DWPLGNGADGLDQFYHVAMGVYWHFILFQFWDTRRSDFMQMLVHHVATISLLAFSWLLSLVRIGALIMLCHDVADIFMETAKLFNYSQ-KRFHWCHLAADGFFFAFAGVFGFTRLYIFPKYLVLSVW---RAAVLSEVMRHFFMGQLCTLLVLHVFW 462
            D+P    + G+  +Y +A   YW  +L QF D  R DF QM +HHV TI LL FSW  +L R+G L++L HD+AD F+E AK+  Y+   R  W        F  F+ +F  TRL+I+P Y++ S        V +    +FF G L  LL+LH+FW
Sbjct:  177 DYPHHEVSSGIWWYYMLASAFYWSLMLSQFVDAHRKDFWQMFIHHVTTIFLLGFSWTCNLTRVGTLVLLVHDIADPFLEIAKMAKYANFSRLCWV------LFVVFSFMFLATRLWIYPIYILKSTLFEKNTIVPTFPAHYFFNGMLLLLLMLHMFW 327
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BLAST of mRNA_E-fasciculatus_F_contig14079.2980.1 vs. uniprot
Match: A0A8J2MXE2_9NEOP ((African queen) hypothetical protein n=3 Tax=Nymphalidae TaxID=33415 RepID=A0A8J2MXE2_9NEOP)

HSP 1 Score: 107 bits (267), Expect = 7.320e-25
Identity = 61/143 (42.66%), Postives = 83/143 (58.04%), Query Frame = 1 
Query:   43 FYHVAMGVYWHFILFQFWDTRRSDFMQMLVHHVATISLLAFSWLLSLVRIGALIMLCHDVADIFMETAKLFNYSQKRFHWCHLAADGFFFAFAGVFGFTRLYIFPKYLVLSVW-RAAVLSEVMR--HFFMGQLCTLLVLHVFW 462
            +Y ++   YW   + QFWD RR DF QM VHH+ATI LL+FSW+ +L RIG L++L HD ADIF+E AK   Y+  +        D  F  F  ++  TRL I+P Y++ S   RA +L  +    + F   LC LL LH+ W
Sbjct:  183 YYMISAAFYWSLTISQFWDVRRKDFWQMFVHHIATILLLSFSWVCNLHRIGTLVLLLHDCADIFLEAAKAAKYANYQ-----KLCDAIFTVFTALWIMTRLGIYPFYIIWSTSIRAPMLLPMFAAYYIFNSLLCLLLALHMVW 320
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BLAST of mRNA_E-fasciculatus_F_contig14079.2980.1 vs. uniprot
Match: UPI0011831D1D (ceramide synthase 5 n=1 Tax=Manduca sexta TaxID=7130 RepID=UPI0011831D1D)

HSP 1 Score: 107 bits (266), Expect = 1.030e-24
Identity = 60/143 (41.96%), Postives = 84/143 (58.74%), Query Frame = 1 
Query:   43 FYHVAMGVYWHFILFQFWDTRRSDFMQMLVHHVATISLLAFSWLLSLVRIGALIMLCHDVADIFMETAKLFNYSQKRFHWCHLAADGFFFAFAGVFGFTRLYIFPKYLVLSVW-RAAVLSEVMR--HFFMGQLCTLLVLHVFW 462
            +Y ++   YW   + QFWD RR DF QM VHH+ATI+LL+FSW+ +L RIG L++L HD ADIF+E+ K   Y+  +        D  F A   V+  TR+ I+P Y++ S   RA +L  +    + F   LC LL LH+ W
Sbjct:  181 YYMISSAFYWSLTISQFWDVRRKDFWQMFVHHIATIALLSFSWVCNLHRIGTLMLLLHDCADIFVESVKASKYANYQ-----RLCDALFLALVVVWVLTRVVIYPFYIIWSTSVRAPMLLPMFPAYYIFNSLLCLLLALHIIW 318
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BLAST of mRNA_E-fasciculatus_F_contig14079.2980.1 vs. uniprot
Match: UPI0001CB9F56 (ceramide synthase 6-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CB9F56)

HSP 1 Score: 105 bits (262), Expect = 4.370e-24
Identity = 60/159 (37.74%), Postives = 95/159 (59.75%), Query Frame = 1 
Query:    4 DWPLGNGADGLDQFYHVAMGVYWHFILFQFWDTRRSDFMQMLVHHVATISLLAFSWLLSLVRIGALIMLCHDVADIFMETAKLFNYSQKRFHWCHLAADGFFFAFAGVFGFTRLYIFPKYLVLSVWRAAVLSEVMRH------FFMGQLCTLLVLHVFW 462
            D+P  +  D L+++Y + +  Y   +  QF D +R DF+QM +HH+AT+ L+ FSW+++++R+GALI+L HDV+DIF+E AK+ NY++ +        D  F  FA +F  +RL +FP Y+  S   AA+ S  +         F   L  L +LH+FW
Sbjct:  168 DYPYQSLTDQLEKYYLLELSFYCSLLFSQFLDVKRKDFVQMFIHHIATVMLIGFSWVVNMIRVGALIILTHDVSDIFLEAAKMTNYAKYQ-----RICDVLFIIFAIIFFVSRLIVFPLYVFKS---AAIESREICGPWPSWWIFNILLLVLQLLHIFW 318
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14079.2980.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G213_ECTSI2.700e-10294.81TLC domain-containing protein n=2 Tax=Ectocarpus T... [more]
I2CPH2_NANGC1.710e-2844.44Lag1 longevity assurance 5-like protein (Fragment)... [more]
A0A6P4ZYW6_BRABE2.670e-2842.95LOW QUALITY PROTEIN: ceramide synthase 6-like n=5 ... [more]
A0A4D9CWH6_9STRA2.000e-2639.10TLC domain-containing protein n=2 Tax=Monodopsidac... [more]
UPI001E273A051.650e-2541.96ceramide synthase 6-like n=1 Tax=Melitaea cinxia T... [more]
R4G7Z2_RHOPR1.660e-2541.67Protein transporter of the tram translocating chai... [more]
A0A8J2JAJ9_9HEXA6.390e-2540.13Hypothetical protein n=1 Tax=Allacma fusca TaxID=3... [more]
A0A8J2MXE2_9NEOP7.320e-2542.66(African queen) hypothetical protein n=3 Tax=Nymph... [more]
UPI0011831D1D1.030e-2441.96ceramide synthase 5 n=1 Tax=Manduca sexta TaxID=71... [more]
UPI0001CB9F564.370e-2437.74ceramide synthase 6-like n=1 Tax=Saccoglossus kowa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14079contigE-fasciculatus_F_contig14079:547..3350 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score308.1
Seed ortholog evalue2.3e-81
Seed eggNOG ortholog2880.D7G213
Preferred nameCERS5
KEGG rclassRC00004,RC00064
KEGG koko:K04709,ko:K04710,ko:K05613,ko:K17087
KEGG TC2.A.23.2.2
KEGG ReactionR01496,R06517,R06527
KEGG Pathwayko00600,ko01100,ko04071,ko04724,ko05014,map00600,map01100,map04071,map04724,map05014
KEGG ModuleM00094,M00099
GOsGO:0000981,GO:0001302,GO:0001701,GO:0001932,GO:0001934,GO:0003674,GO:0003700,GO:0003824,GO:0005102,GO:0005125,GO:0005126,GO:0005160,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005637,GO:0005737,GO:0005783,GO:0005789,GO:0006355,GO:0006357,GO:0006629,GO:0006638,GO:0006639,GO:0006641,GO:0006643,GO:0006665,GO:0006672,GO:0006807,GO:0006873,GO:0006885,GO:0006950,GO:0006984,GO:0006991,GO:0007009,GO:0007035,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007178,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007492,GO:0007498,GO:0007568,GO:0007569,GO:0008150,GO:0008152,GO:0008285,GO:0008544,GO:0008610,GO:0009058,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009636,GO:0009719,GO:0009790,GO:0009792,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009913,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010046,GO:0010256,GO:0010468,GO:0010469,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010604,GO:0010605,GO:0010624,GO:0010626,GO:0010628,GO:0010646,GO:0010647,GO:0010721,GO:0010862,GO:0010941,GO:0010975,GO:0010977,GO:0012505,GO:0014013,GO:0014014,GO:0016020,GO:0016021,GO:0016043,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019216,GO:0019219,GO:0019220,GO:0019222,GO:0019725,GO:0019866,GO:0022008,GO:0023051,GO:0023052,GO:0023056,GO:0030003,GO:0030004,GO:0030148,GO:0030154,GO:0030176,GO:0030216,GO:0030334,GO:0030336,GO:0030424,GO:0030509,GO:0030545,GO:0030641,GO:0030855,GO:0031090,GO:0031224,GO:0031227,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031344,GO:0031345,GO:0031399,GO:0031401,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0031984,GO:0032101,GO:0032102,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032879,GO:0032933,GO:0032991,GO:0033554,GO:0034399,GO:0034641,GO:0034644,GO:0035690,GO:0036146,GO:0040012,GO:0040013,GO:0042127,GO:0042175,GO:0042221,GO:0042325,GO:0042327,GO:0042493,GO:0042592,GO:0042981,GO:0042995,GO:0043005,GO:0043009,GO:0043067,GO:0043086,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043408,GO:0043588,GO:0043603,GO:0043604,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0045833,GO:0045834,GO:0045851,GO:0045893,GO:0045934,GO:0045935,GO:0045937,GO:0045944,GO:0046467,GO:0046486,GO:0046513,GO:0046889,GO:0046890,GO:0048018,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048679,GO:0048681,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048878,GO:0050291,GO:0050767,GO:0050768,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050801,GO:0050896,GO:0050994,GO:0050995,GO:0051052,GO:0051053,GO:0051093,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051270,GO:0051271,GO:0051338,GO:0051348,GO:0051452,GO:0051453,GO:0051716,GO:0051960,GO:0051961,GO:0051972,GO:0051974,GO:0055067,GO:0055080,GO:0055082,GO:0060251,GO:0060253,GO:0060255,GO:0060284,GO:0060322,GO:0060393,GO:0060395,GO:0060429,GO:0061024,GO:0061576,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070141,GO:0070570,GO:0070571,GO:0070848,GO:0070887,GO:0071214,GO:0071310,GO:0071363,GO:0071478,GO:0071482,GO:0071492,GO:0071495,GO:0071501,GO:0071704,GO:0071772,GO:0071773,GO:0071840,GO:0072720,GO:0072721,GO:0080090,GO:0080134,GO:0080135,GO:0090092,GO:0090100,GO:0097237,GO:0097458,GO:0098771,GO:0098772,GO:0098827,GO:0104004,GO:0120025,GO:0120035,GO:0140110,GO:1900147,GO:1900148,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1901701,GO:1902531,GO:1902680,GO:1903034,GO:1903035,GO:1903506,GO:1903508,GO:1903975,GO:1903976,GO:1905044,GO:1905045,GO:2000026,GO:2000112,GO:2000113,GO:2000145,GO:2000146,GO:2000278,GO:2000279,GO:2001141
EggNOG free text desc.sphingosine N-acyltransferase activity
EggNOG OGsCOG5058@1,KOG1607@2759
EC2.3.1.24
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02000,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTRAM/LAG1/CLN8 homology domain
Ec32 orthologEc-07_003350.1
Exons4
Model size465
Cds size465
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14079.2980.1prot_E-fasciculatus_F_contig14079.2980.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig14079 547..3350 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927897.770145-CDS-E-fasciculatus_F_contig14079:546..7231622927897.770145-CDS-E-fasciculatus_F_contig14079:546..723Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14079 547..723 -
1695995743.313918-CDS-E-fasciculatus_F_contig14079:546..7231695995743.313918-CDS-E-fasciculatus_F_contig14079:546..723Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14079 547..723 -
1622927897.7851624-CDS-E-fasciculatus_F_contig14079:1517..16261622927897.7851624-CDS-E-fasciculatus_F_contig14079:1517..1626Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14079 1518..1626 -
1695995743.3265347-CDS-E-fasciculatus_F_contig14079:1517..16261695995743.3265347-CDS-E-fasciculatus_F_contig14079:1517..1626Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14079 1518..1626 -
1622927897.8029482-CDS-E-fasciculatus_F_contig14079:2172..22611622927897.8029482-CDS-E-fasciculatus_F_contig14079:2172..2261Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14079 2173..2261 -
1695995743.3359191-CDS-E-fasciculatus_F_contig14079:2172..22611695995743.3359191-CDS-E-fasciculatus_F_contig14079:2172..2261Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14079 2173..2261 -
1622927897.841149-CDS-E-fasciculatus_F_contig14079:3260..33501622927897.841149-CDS-E-fasciculatus_F_contig14079:3260..3350Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14079 3261..3350 -
1695995743.3463066-CDS-E-fasciculatus_F_contig14079:3260..33501695995743.3463066-CDS-E-fasciculatus_F_contig14079:3260..3350Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14079 3261..3350 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig14079.2980.1

>prot_E-fasciculatus_F_contig14079.2980.1 ID=prot_E-fasciculatus_F_contig14079.2980.1|Name=mRNA_E-fasciculatus_F_contig14079.2980.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=155bp
EDWPLGNGADGLDQFYHVAMGVYWHFILFQFWDTRRSDFMQMLVHHVATI
SLLAFSWLLSLVRIGALIMLCHDVADIFMETAKLFNYSQKRFHWCHLAAD
GFFFAFAGVFGFTRLYIFPKYLVLSVWRAAVLSEVMRHFFMGQLCTLLVL
HVFW*
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mRNA from alignment at E-fasciculatus_F_contig14079:547..3350-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig14079.2980.1 ID=mRNA_E-fasciculatus_F_contig14079.2980.1|Name=mRNA_E-fasciculatus_F_contig14079.2980.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2804bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14079:547..3350- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GAAGACTGGCCGCTGGGGAACGGCGCGGATGGGCTGGACCAGTTCTACCA
CGTGGCGATGGGGGTGTACTGGCACTTCATCCTATTCCAGGTTATATAAG
TAATTAAGGAATGTTCTCTTATATGTACAGTCGCCGATTTTTGGTTTGAC
TTGTATGGTTAACTCACACCCTCGCGCTCAGTACAAGCGCGCACCCCGCC
TATGTAGCGGCAGCGTCCGAGCGTGTAGCTCCGAGTCGGGGTGGGATGAA
AATGGAGTTCCTCTGCTAGGTCCCCCCCCCTAGCTGCGGAAGTCCACCTC
TTCGCTGTCTTTGTAGGTAGGATGCAGCCCACGCTCCATTCGACTGACTG
CCCAACGCTTTCTGACCATTTTGTCGATTGGTACAAGTACTGTACTTACT
ATACTTGAGCCTGATGGGCGTGTTCTTGGCATGCAACGCACCCGGCTTTG
GGGAGAGGCGCGTCCACGAGCCTGGTCAGCGTATTCTTGACATGCTAGAC
ATGCCCCGATGTTGTAGAGAGGCGGAGGTCTCTGTTCGAACGACTACGGG
CATAAACGATTTCGCGTACGTACCCCGTCCCCACAGAGACCGCTGCCTTG
TTTCGGTATTTACTACAAATATGTATTTTCCGTTGGGAGTGCGCAGTGTA
AGCTTTTCCGCCGAGATGGTTGCGTGCCTACCTCTAGTACGGCTTTGGTT
TTTTTCTTTAGAACGGCTTTGGTTTTTCTCTTTACTAGTACGGCTTTGGT
TTTTCTGCTTTGACTTGTGTGCGTACATGATGGCGCTCGAAAAGAGTCAC
GGTAGACCTTTTCGGTACAGTAGACTCTCGCTTCTTCAACACCAACATAG
CGGTAGATTGCTAACGCTGTTGCCGGTAGTCTCTACTAATCCCCACGGCA
GTAGTGCCTAAAACTACAATATCCAATACACGTTGTGTGACTCCTCCACA
CGAGGGACAAACGGTGCAAAAAAGGCGCTCGTCGTACAACTCTCCGCGCT
TGTACATATCCCAGTTCCCTGTCTTTCGCTCTTTTTCCCACGTCCGACAC
TACTATGCTGCTGCCGATGCGTTGTTGACTTGTGGGCAGTTTTGGGACAC
GAGACGGTCTGACTTCATGCAGATGCTGGTCCACCACGTGGCCACCATCT
CCCTGCTCGCATTCTCTTGGCTTCTCAGGTATCTAATCTTATCCTATCTT
ATCGTGTACCGACCTGACCTAGCGTCGCAGTCACTGCGTTCGCTGCTGCT
GCTGCTGCCGCTGTGAGTGGTAACCTTTCGGGGATTGTTTGATGGATGCT
GCCTGCTGCTCTGTCGCACTAGAAACGACCCTGCTGCTTGTAGACGAAGC
AGCAGCCAGCAGCAGGGCTTACGGGAGTGCGATACGTCTCTCTTCTGCGC
GTGTACCGGAGGGGCAGTAAGGCTAGTCACGGTCTGACGGCGTTTTCAGT
CAAGGGTTAATAGAAACAGCACGATGACGGCAGTGTCACGCCGCATATCA
TGCTCAAGAGTCACATGCACCAACGACTAGCAAGCTGCTGTAGTGCCACA
AGCCTTCTTTTTGTCGTTCTTCTATCCGCGCCGACTGTCTGTCACGAGAA
GAAGAAAAAATGCGTTCAGGGTGCAAAGAGGCTTTTATAGTTGCGTGTGT
GTTTGCCTGCCTAAAAACATGCTCTCGTGCGTATGCATCCTCGGGTTGTG
TTTGGCCGCCGTCCGTTCGAGAAGTCTGGTGCGTATTGGTGCCCTGATCA
TGCTTTGCCACGACGTGGCCGACATCTTCATGGAGACGGCTAAGCTGTTC
AACTACTCGCAAAAGCGCTTCCACTGGTGCCATGTGAGTACCCCTAGCCC
CCCTGCCCCTCCCCGTTCTTCAGGGTTGAGTTTTGTACGTCTCATGCTTA
CGCTACACCGTACGTGCTTCAGGGTCGAGTTTTGTATGTCTCACGCTTAC
GCTGCACCGCACGGTACTTCGCAACATACAGTGTTTGGTTTCTGTGTCGT
TGTGCGGTCTGGACGCATCGTACGCAACAGGGTTACCGTGCGGGCATTTT
TGGTGGTGTATGTCTGTATGCCGCGCACCCGTGTAGCGTGTGCCGAACAG
AGCGTTACCCCGTCGTATGCCATATCCATTCGATACTGCTACCCGCAGCT
GTTGTTACTCGTTGCCCCCCCTCTCGCTGTCGCTCTCTCTGTAGTCCTTT
TCTTTGCCTCATCCTGCCTCTTTTTCCTATGCTCCTGCATCGCTCGTTAC
CCTCCTTGCTTTCAACACACGCACAATAAAGTATGCACACACACACACAC
GGCGTCTTTTCAGCCGGTGAGCGCGGTCGATGCTACTAACAAAAGACACA
CACACACACACACACGTTTTTTTACCCGTTGAGACTGACGTCTTTCATTG
GCCAGCCAGTTGTTAGCACCGTCGACTCTTACCATGATAGCACACGCTCA
TGACGCCCCCTCACGGGGGGCCCAGATCATGGCCCTTAATGAAGCATCGC
ACGTTTTCAACAGCACTGAGACTGGCGTCTTTTCACTGGCCAGCCGGTTG
GTTAACTGACGCGCGGTCGACGCTATATATTTAATGAAACACACGCGCGT
GCGCGTGGGACACACACACACCCACAGCTGGCGGCCGATGGCTTTTTCTT
CGCCTTCGCCGGAGTGTTTGGGTTCACGAGGCTGTACATCTTCCCCAAGT
ACCTCGTCCTGAGCGTGTGGCGTGCCGCCGTCCTGAGCGAGGTGATGAGG
CACTTCTTCATGGGGCAGCTGTGCACGCTTCTCGTGCTCCACGTGTTCTG
GTGA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14079:547..3350-

>mRNA_E-fasciculatus_F_contig14079.2980.1 ID=mRNA_E-fasciculatus_F_contig14079.2980.1|Name=mRNA_E-fasciculatus_F_contig14079.2980.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=930bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14079:547..3350- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GAAGACTGGCCGCTGGGGAACGGCGCGGATGGGCTGGACCAGTTCTACCA
CGTGGCGATGGGGGTGTACTGGCACTTCATCCTATTCCAGGAAGACTGGC
CGCTGGGGAACGGCGCGGATGGGCTGGACCAGTTCTACCACGTGGCGATG
GGGGTGTACTGGCACTTCATCCTATTCCAGTTTTGGGACACGAGACGGTC
TGACTTCATGCAGATGCTGGTCCACCACGTGGCCACCATCTCCCTGCTCG
CATTCTCTTGGCTTCTCAGTTTTGGGACACGAGACGGTCTGACTTCATGC
AGATGCTGGTCCACCACGTGGCCACCATCTCCCTGCTCGCATTCTCTTGG
CTTCTCAGTCTGGTGCGTATTGGTGCCCTGATCATGCTTTGCCACGACGT
GGCCGACATCTTCATGGAGACGGCTAAGCTGTTCAACTACTCGCAAAAGC
GCTTCCACTGGTGCCATTCTGGTGCGTATTGGTGCCCTGATCATGCTTTG
CCACGACGTGGCCGACATCTTCATGGAGACGGCTAAGCTGTTCAACTACT
CGCAAAAGCGCTTCCACTGGTGCCATCTGGCGGCCGATGGCTTTTTCTTC
GCCTTCGCCGGAGTGTTTGGGTTCACGAGGCTGTACATCTTCCCCAAGTA
CCTCGTCCTGAGCGTGTGGCGTGCCGCCGTCCTGAGCGAGGTGATGAGGC
ACTTCTTCATGGGGCAGCTGTGCACGCTTCTCGTGCTCCACGTGTTCTGG
TGACTGGCGGCCGATGGCTTTTTCTTCGCCTTCGCCGGAGTGTTTGGGTT
CACGAGGCTGTACATCTTCCCCAAGTACCTCGTCCTGAGCGTGTGGCGTG
CCGCCGTCCTGAGCGAGGTGATGAGGCACTTCTTCATGGGGCAGCTGTGC
ACGCTTCTCGTGCTCCACGTGTTCTGGTGA
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