prot_E-fasciculatus_F_contig1405.2970.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1405.2970.1
Unique Nameprot_E-fasciculatus_F_contig1405.2970.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length371
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1405.2970.1 vs. uniprot
Match: D7FL33_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL33_ECTSI)

HSP 1 Score: 126 bits (316), Expect = 5.520e-31
Identity = 157/200 (78.50%), Postives = 159/200 (79.50%), Query Frame = 0 
Query:  175 MGRQXXXXXXXSAPERGAAGRAAQQTREAGLVSAGPGSARRSXXXXXXXXXXXXXXXXXXXXXGTLSXXXXXXXXXGYGDXXXXXXXXXXXXXXXXXXXXXXXX---LCVGVAWTXXXXXXXXXXXXXXXXXXXALEAAAACALLGTVVLAAIALCLGLPTWSRSRNQDNCTDSEWWCCWLWRRGGDETDDEGGKLAHVG 371
            MGR+       SAPERGA GRAAQQ REAGLVSAG       XXXXXXXXXXXXXXXXXXXXX    XXXXXXXXX    XXXXXXXXXXXXXXXXXXXXX      LCVGVAWT  XXXXXXXXXXXXXXXX ALEAAA CALLG  VLAAIALCLGLPT   SRN+D  TDSEWWCCWLWRRGGDETDDEGGKLAHVG
Sbjct:    1 MGRRWWPGSDGSAPERGAEGRAAQQAREAGLVSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQHGCCLCVGVAWTAAXXXXXXXXXXXXXXXXEALEAAAXCALLGAAVLAAIALCLGLPT--LSRNED--TDSEWWCCWLWRRGGDETDDEGGKLAHVG 196
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1405.2970.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FL33_ECTSI5.520e-3178.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 298..308
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 309..330
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..276
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 331..371
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 277..297
NoneNo IPR availableTMHMMTMhelixcoord: 279..301
NoneNo IPR availableTMHMMTMhelixcoord: 311..333

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1405contigE-fasciculatus_F_contig1405:15666..18266 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1405.2970.1mRNA_E-fasciculatus_F_contig1405.2970.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1405 15666..18266 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1405.2970.1 ID=prot_E-fasciculatus_F_contig1405.2970.1|Name=mRNA_E-fasciculatus_F_contig1405.2970.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=371bp
MEGKAGDGYLVGVSPRSTPPSRRKTLTQLVQEERLGSLKYLITSSPPSRN
NSSRPRAAAPTPGRGAATPASGPNRGTRHSRRSSRGSNEEAAAVDSVSRS
RGLFSSAPNASSDDSGRRPPFGNGKGNGKGNGKGKGSYAYDDVYRLSIGT
LERAPAVGSSSQQINSSSSAWAGQMGRQGSPGSDGSAPERGAAGRAAQQT
REAGLVSAGPGSARRSSGGGSSSRRASSGDGDSSAGVGTLSSGEDNNSFF
GYGDNVDDDNDDYDGAFSRRRRLQNGCCLCVGVAWTAALLLCLASGGSTA
WGGGEALEAAAACALLGTVVLAAIALCLGLPTWSRSRNQDNCTDSEWWCC
WLWRRGGDETDDEGGKLAHVG
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