mRNA_E-fasciculatus_F_contig14049.2967.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14049.2967.1 vs. uniprot
Match: D8LSU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSU3_ECTSI) HSP 1 Score: 226 bits (575), Expect = 2.120e-66 Identity = 104/106 (98.11%), Postives = 105/106 (99.06%), Query Frame = 3
Query: 3 RLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGIAFDNRGFSRTDRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQLGL 320
RLR+LAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGIAFDNRGFSR DRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQLGL
Sbjct: 1871 RLRVLAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGIAFDNRGFSRADRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQLGL 1976
BLAST of mRNA_E-fasciculatus_F_contig14049.2967.1 vs. uniprot
Match: A0A6H5KS52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS52_9PHAE) HSP 1 Score: 224 bits (572), Expect = 3.050e-66 Identity = 104/106 (98.11%), Postives = 104/106 (98.11%), Query Frame = 3
Query: 3 RLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGIAFDNRGFSRTDRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQLGL 320
RLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGI FDNRGFSR DRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQLGL
Sbjct: 432 RLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGITFDNRGFSRADRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQLGL 537
BLAST of mRNA_E-fasciculatus_F_contig14049.2967.1 vs. uniprot
Match: A0A4P9YCU7_ROZAC (Uncharacterized protein n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A4P9YCU7_ROZAC) HSP 1 Score: 72.0 bits (175), Expect = 1.090e-12 Identity = 33/104 (31.73%), Postives = 54/104 (51.92%), Query Frame = 3
Query: 3 RLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGIAFDNRGFSRTDRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQL 314
RL LA +GM W+ C ++E++ WW+ L L I FDN F R+ GEYQK+L+P +LE+S D+ ++CE + + + F ++ +
Sbjct: 173 RLIKLASIGMACGNLWNQRSFFVDCQQLEKNGIWWYHLNLLEIPFDNVKF----RTSKFGEYQKTLIPMILEKSDLDISSVKDYCECFDINKDFAYFEFIQQSI 272
BLAST of mRNA_E-fasciculatus_F_contig14049.2967.1 vs. uniprot
Match: A0A075AYK9_ROZAC (Uncharacterized protein n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075AYK9_ROZAC) HSP 1 Score: 72.0 bits (175), Expect = 1.860e-12 Identity = 33/104 (31.73%), Postives = 54/104 (51.92%), Query Frame = 3
Query: 3 RLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGIAFDNRGFSRTDRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQL 314
RL LA +GM W+ C ++E++ WW+ L L I FDN F R+ GEYQK+L+P +LE+S D+ ++CE + + + F ++ +
Sbjct: 1055 RLIKLASIGMACGNLWNQRSFFVDCQQLEKNGIWWYHLNVLEIPFDNVKF----RTSKFGEYQKTLIPMILEKSDLDISSVKDYCECFDINKDFAYFEFIQQSI 1154
BLAST of mRNA_E-fasciculatus_F_contig14049.2967.1 vs. uniprot
Match: A0A507FKD6_9FUNG (Rod_C domain-containing protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FKD6_9FUNG) HSP 1 Score: 68.6 bits (166), Expect = 3.080e-11 Identity = 33/104 (31.73%), Postives = 55/104 (52.88%), Query Frame = 3
Query: 3 RLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGIAFDNRGFSRTDRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQL 314
RL A +G+ A+ AW+ C + +++ WWH L L ++F+ + + GEYQ+ LVPALLE++G D+ +L+F Y + + F Y+ L
Sbjct: 1574 RLLKFAAIGIAASLAWNQRTFQVTCETLAKNAKWWHQLHLLNVSFNMDQY----KLSTSGEYQRRLVPALLEKTGLDIMTSLDFARTYNIEDDFVIFEYITQLL 1673
BLAST of mRNA_E-fasciculatus_F_contig14049.2967.1 vs. uniprot
Match: A0A1Y1YCH8_9FUNG (Rod_C domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YCH8_9FUNG) HSP 1 Score: 63.9 bits (154), Expect = 1.290e-9 Identity = 33/100 (33.00%), Postives = 50/100 (50.00%), Query Frame = 3
Query: 3 RLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGIAFDNRGFSRTDRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYV 302
RL A +G+ A W+ C ++ ++ WWH L L I FD+ F R+ EYQ+ LVP L+E++ D+ LEF Y + + + L YV
Sbjct: 1496 RLIKFAAIGIGCATVWEQRGFYVNCKQLGANARWWHQLKILDIPFDDAQF----RASKHSEYQRKLVPLLMEKTNLDILTVLEFGRAYDLEDDYSYLEYV 1591
BLAST of mRNA_E-fasciculatus_F_contig14049.2967.1 vs. uniprot
Match: F4PEL7_BATDJ (Rod_C domain-containing protein n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=F4PEL7_BATDJ) HSP 1 Score: 58.2 bits (139), Expect = 1.370e-7 Identity = 30/104 (28.85%), Postives = 51/104 (49.04%), Query Frame = 3
Query: 3 RLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLGIAFDNRGFSRTDRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQL 314
RL +A VG A W HD C + + WW L L I FD + ++ V G+YQ+ L+P +L+++ DL L F + Y + + + +++ Q+
Sbjct: 1417 RLERVAKVGAMAGLVWSQHDFQANCQRLAVHAGWWQELQVLEIPFDQAKY----QASVNGDYQRELIPHILQKTDGDLETTLAFSQYYHIED----IRFINEQI 1512
BLAST of mRNA_E-fasciculatus_F_contig14049.2967.1 vs. uniprot
Match: A0A4P9Z0X2_9FUNG (Rough deal protein C-terminal region-domain-containing protein n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9Z0X2_9FUNG) HSP 1 Score: 57.0 bits (136), Expect = 3.370e-7 Identity = 31/117 (26.50%), Postives = 51/117 (43.59%), Query Frame = 3
Query: 3 RLRILAGVGMYAARAWDNHDLLHQCMEVERDSHWWHVLTSLG-------------IAFDNRGFSRTDRSQVPGEYQKSLVPALLERSGCDLGLALEFCERYGVGEAFPCLLYVDNQL 314
RL LA +G+ A W + C ++ +++WW LG + F + F SQ G+YQ++L+P LLER+ D + E+ + Y + E C + L
Sbjct: 192 RLAQLASLGVICAAQWKQRTFMADCRQLAVNAYWWRQFRRLGAWQHASMAMTRGCMEFSDNAFRA---SQSTGDYQRTLLPTLLERAAWDTSVVFEYADAYQLDEDETCFACLHTML 305 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14049.2967.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14049.2967.1 >prot_E-fasciculatus_F_contig14049.2967.1 ID=prot_E-fasciculatus_F_contig14049.2967.1|Name=mRNA_E-fasciculatus_F_contig14049.2967.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=107bp EGYASWRESACTRPAPGTTTTSCTSAWRWRGTRTGGTCSRASASPSTTGAback to top mRNA from alignment at E-fasciculatus_F_contig14049:2184..3077- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14049.2967.1 ID=mRNA_E-fasciculatus_F_contig14049.2967.1|Name=mRNA_E-fasciculatus_F_contig14049.2967.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=894bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14049:2184..3077- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14049:2184..3077- >mRNA_E-fasciculatus_F_contig14049.2967.1 ID=mRNA_E-fasciculatus_F_contig14049.2967.1|Name=mRNA_E-fasciculatus_F_contig14049.2967.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=642bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14049:2184..3077- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |