prot_E-fasciculatus_F_contig14032.2959.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14032.2959.1
Unique Nameprot_E-fasciculatus_F_contig14032.2959.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length122
Homology
BLAST of mRNA_E-fasciculatus_F_contig14032.2959.1 vs. uniprot
Match: A0A6H5KRF6_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRF6_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 8.340e-52
Identity = 81/121 (66.94%), Postives = 93/121 (76.86%), Query Frame = 0
Query:    1 MTVAQMDKDDENDEFERVYEIHVAPKTANQMRDCPFFVWFTSREEKDRQRQAFGLRCLNCGSDTHFVRDCDKGYMNVSKILNPNLAKGTAKEVKDRWERWLSRFQHWHASRMENRRRGYNN 121
            MTV  MD +DE  EF+RVY+IH AP+T +Q  DCPFF WFTS EEKDR R+AFGLRCLNCGS+ HFVRDCDKGY+N S +LN NLA G+  EVK RW+RWL R + W A RME RRR  NN
Sbjct:  234 MTVEDMDYEDECAEFQRVYDIHAAPRTNSQATDCPFFAWFTSVEEKDRHRRAFGLRCLNCGSEGHFVRDCDKGYINASNMLNKNLATGSKAEVKARWDRWLHRLRQWQAHRMEERRRVRNN 354          
BLAST of mRNA_E-fasciculatus_F_contig14032.2959.1 vs. uniprot
Match: A0A6H5KBL4_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBL4_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 2.580e-49
Identity = 80/121 (66.12%), Postives = 93/121 (76.86%), Query Frame = 0
Query:    1 MTVAQMDKDDENDEFERVYEIHVAPKTANQMRDCPFFVWFTSREEKDRQRQAFGLRCLNCGSDTHFVRDCDKGYMNVSKILNPNLAKGTAKEVKDRWERWLSRFQHWHASRMENRRRGYNN 121
            MTV  MD +DE  EF+RVY+IH AP+T +Q  DCPFF WFTS EEKDR RQAFGLRCLNCGS+ HFVRDCDKGY+N S +LN NLA  +  EVK RW+RWL R + W ++RME RRR  NN
Sbjct:  433 MTVEDMDYEDECAEFKRVYDIHAAPRTNSQATDCPFFAWFTSVEEKDRHRQAFGLRCLNCGSEGHFVRDCDKGYINTSNMLNKNLATESKAEVKARWDRWLHRLRQWQSNRMEERRRERNN 553          
BLAST of mRNA_E-fasciculatus_F_contig14032.2959.1 vs. uniprot
Match: A0A6H5K0Q4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Q4_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 7.580e-44
Identity = 68/107 (63.55%), Postives = 83/107 (77.57%), Query Frame = 0
Query:    1 MTVAQMDKDDENDEFERVYEIHVAPKTANQMRDCPFFVWFTSREEKDRQRQAFGLRCLNCGSDTHFVRDCDKGYMNVSKILNPNLAKGTAKEVKDRWERWLSRFQHW 107
            MTV  MD +D+ +EF+RVY IH +P+T +Q+ DCPFF WFTS EEKDR R+AFG RCLNCGS+  FVRDC KGY+N S +LN NLA G+  EVK RW+RWL+R Q W
Sbjct:  180 MTVEDMDYEDKCEEFKRVYGIHSSPRTNSQVNDCPFFAWFTSVEEKDRHRRAFGSRCLNCGSEGQFVRDCVKGYINASSMLNRNLANGSKAEVKARWDRWLNRLQQW 286          
BLAST of mRNA_E-fasciculatus_F_contig14032.2959.1 vs. uniprot
Match: D7G674_ECTSI (CCHC-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G674_ECTSI)

HSP 1 Score: 120 bits (300), Expect = 3.500e-31
Identity = 52/75 (69.33%), Postives = 64/75 (85.33%), Query Frame = 0
Query:    1 MTVAQMDKDDENDEFERVYEIHVAPKTANQMRDCPFFVWFTSREEKDRQRQAFGLRCLNCGSDTHFVRDCDKGYM 75
            MTV ++D +DE  EF+RVY+IHV+P+T +QM+DCPFF WFTS EEKDR R+AFG RCL CGS+ HFVRDCDKGY+
Sbjct:  176 MTVDEVDCEDECAEFQRVYDIHVSPRTNSQMKDCPFFAWFTSVEEKDRHRRAFGSRCLKCGSEGHFVRDCDKGYI 250          
BLAST of mRNA_E-fasciculatus_F_contig14032.2959.1 vs. uniprot
Match: A0A6H5K255_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K255_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 1.070e-23
Identity = 48/75 (64.00%), Postives = 57/75 (76.00%), Query Frame = 0
Query:    1 MTVAQMDKDDENDEFERVYEIHVAPKTANQMRDCPFFVWFTSREEKDRQRQAFGLRCLNCGSDTHFVRDCDKGYM 75
            MTV  MD +DE  EF+RVY+IH AP+T +Q  DCPFF WFTS EEKDR R+AFGL CLNCGS+ HFVR   +G +
Sbjct:  613 MTVEDMDYEDECAEFKRVYDIHAAPRTNSQATDCPFFAWFTSVEEKDRHRRAFGLTCLNCGSEGHFVRIVIRGTL 687          
BLAST of mRNA_E-fasciculatus_F_contig14032.2959.1 vs. uniprot
Match: A0A6H5K1N6_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1N6_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 9.670e-23
Identity = 47/106 (44.34%), Postives = 68/106 (64.15%), Query Frame = 0
Query:    9 DDENDEFERVYEIHVAPKTANQMRD---CPFFVWFTSREEKDRQRQAFGLRCLNCGSDTHFVRDCDKGYMNVSKILNPNLAKGTAKEVKDRWERWLSRFQHWHASR 111
            +DE  EF++V+  +VA +      D    PF+  F SR+E+D  RQA+GL+CLNCG  +HFVR+C   ++N S +LNP L +G  + VK+RW +WL R + WH  R
Sbjct:  733 EDEEKEFKKVH--YVATQWEKGKGDESYIPFYTRFDSRKEQDEARQAYGLKCLNCGDQSHFVRECTHPFINKSNMLNPELGQGPPQLVKERWSKWLKRLRDWHEQR 836          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14032.2959.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KRF6_9PHAE8.340e-5266.94CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KBL4_9PHAE2.580e-4966.12CCHC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5K0Q4_9PHAE7.580e-4463.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G674_ECTSI3.500e-3169.33CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K255_9PHAE1.070e-2364.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1N6_9PHAE9.670e-2344.34CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 109..121
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 56..72
score: 8.532

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14032contigE-fasciculatus_F_contig14032:2628..2993 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14032.2959.1mRNA_E-fasciculatus_F_contig14032.2959.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14032 2590..3104 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14032.2959.1 ID=prot_E-fasciculatus_F_contig14032.2959.1|Name=mRNA_E-fasciculatus_F_contig14032.2959.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=122bp
MTVAQMDKDDENDEFERVYEIHVAPKTANQMRDCPFFVWFTSREEKDRQR
QAFGLRCLNCGSDTHFVRDCDKGYMNVSKILNPNLAKGTAKEVKDRWERW
LSRFQHWHASRMENRRRGYNN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC