mRNA_E-fasciculatus_F_contig14026.2952.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14026.2952.1 vs. uniprot
Match: D7FMV5_ECTSI (Serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV5_ECTSI) HSP 1 Score: 157 bits (398), Expect = 3.750e-43 Identity = 80/97 (82.47%), Postives = 82/97 (84.54%), Query Frame = 1
Query: 1 GGGGAEREWGSGSCRGREPLRSTDLLRIVKDVVNGMLYLHELGVMHRDLKPDNILLDADDRAVIADFGLSRFCHPTNDHTAETGTYRCVCTAVHFHK 291
GG G EREWGS RG EPLR TDLLRIV DVVNGMLYLHELGVMHRDLKPDNILLDADDRAVIADFGLSRF HPTNDHTAETGTYR + V H+
Sbjct: 481 GGVGGEREWGSRRGRGSEPLRPTDLLRIVTDVVNGMLYLHELGVMHRDLKPDNILLDADDRAVIADFGLSRFSHPTNDHTAETGTYRWMAPEVIRHE 577
BLAST of mRNA_E-fasciculatus_F_contig14026.2952.1 vs. uniprot
Match: A0A6H5KIL9_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIL9_9PHAE) HSP 1 Score: 156 bits (394), Expect = 2.910e-42 Identity = 77/94 (81.91%), Postives = 81/94 (86.17%), Query Frame = 1
Query: 10 GAEREWGSGSCRGREPLRSTDLLRIVKDVVNGMLYLHELGVMHRDLKPDNILLDADDRAVIADFGLSRFCHPTNDHTAETGTYRCVCTAVHFHK 291
G EREWGS RG EPLRSTDLLRI+ DVVNGMLYLHELGVMHRDLKPDNILLDADDRAVIADFGLSRF HPT+DHTAETGTYR + V H+
Sbjct: 643 GGEREWGSRRGRGSEPLRSTDLLRIITDVVNGMLYLHELGVMHRDLKPDNILLDADDRAVIADFGLSRFSHPTDDHTAETGTYRWMAPEVIRHE 736
BLAST of mRNA_E-fasciculatus_F_contig14026.2952.1 vs. uniprot
Match: I2CRD9_NANGC (Serine threonine protein kinase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRD9_NANGC) HSP 1 Score: 89.4 bits (220), Expect = 9.190e-21 Identity = 46/90 (51.11%), Postives = 58/90 (64.44%), Query Frame = 1
Query: 22 EWGSGSCRGREPLRSTDLLRIVKDVVNGMLYLHELGVMHRDLKPDNILLDADDRAVIADFGLSRFCHPTNDHTAETGTYRCVCTAVHFHK 291
E GS + R R+ R D+L + DV GM YLH G+MHRDLKPDN+L+DA R VIADFGL ++HT ETGTYR + + V H+
Sbjct: 2 EGGSLASRLRDSGREVDVLEVAMDVARGMEYLHRRGIMHRDLKPDNLLIDASGRVVIADFGLVCPIIAEDEHTGETGTYRYMASEVIRHE 91
BLAST of mRNA_E-fasciculatus_F_contig14026.2952.1 vs. uniprot
Match: B6UD76_MAIZE (ATP binding protein n=2 Tax=Zea mays TaxID=4577 RepID=B6UD76_MAIZE) HSP 1 Score: 76.3 bits (186), Expect = 4.030e-14 Identity = 38/73 (52.05%), Postives = 48/73 (65.75%), Query Frame = 1
Query: 73 LLRIVKDVVNGMLYLHELGVMHRDLKPDNILLDADDRAVIADFGLSRFCHPTNDHTAETGTYRCVCTAVHFHK 291
LL+ DV GM YLH+ G++HRDLK N+LLD +D +ADFGL+RF D TAETGTYR + V H+
Sbjct: 358 LLKFALDVCQGMSYLHQKGIIHRDLKSGNLLLDKNDVVKVADFGLARFQDGGGDMTAETGTYRWMAPEVINHQ 430
BLAST of mRNA_E-fasciculatus_F_contig14026.2952.1 vs. uniprot
Match: A0A3L6EZG4_MAIZE (Serine/threonine-protein kinase STY46 n=2 Tax=Zea mays TaxID=4577 RepID=A0A3L6EZG4_MAIZE) HSP 1 Score: 76.3 bits (186), Expect = 4.150e-14 Identity = 38/73 (52.05%), Postives = 48/73 (65.75%), Query Frame = 1
Query: 73 LLRIVKDVVNGMLYLHELGVMHRDLKPDNILLDADDRAVIADFGLSRFCHPTNDHTAETGTYRCVCTAVHFHK 291
LL+ DV GM YLH+ G++HRDLK N+LLD +D +ADFGL+RF D TAETGTYR + V H+
Sbjct: 379 LLKFALDVCQGMSYLHQKGIIHRDLKSGNLLLDKNDVVKVADFGLARFQDGGGDMTAETGTYRWMAPEVINHQ 451
BLAST of mRNA_E-fasciculatus_F_contig14026.2952.1 vs. uniprot
Match: A0A835YYG5_9STRA (Putative serine/threonine protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYG5_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 9.340e-14 Identity = 39/73 (53.42%), Postives = 46/73 (63.01%), Query Frame = 1
Query: 73 LLRIVKDVVNGMLYLHELGVMHRDLKPDNILLDADDRAVIADFGLSRFCHPTNDHTAETGTYRCVCTAVHFHK 291
+LR+ + GM YLH G++HRDLK NILLDA I DFGLS F HP D TAETGTYR + V H+
Sbjct: 260 VLRLAGQIAEGMRYLHAEGIVHRDLKTANILLDAQGDVRIVDFGLSCFNHPGADLTAETGTYRYMAPEVIRHE 332
BLAST of mRNA_E-fasciculatus_F_contig14026.2952.1 vs. uniprot
Match: A0A0M0KDX5_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0KDX5_9EUKA) HSP 1 Score: 75.1 bits (183), Expect = 1.040e-13 Identity = 42/83 (50.60%), Postives = 54/83 (65.06%), Query Frame = 1
Query: 46 GREPLRSTDLLRIVKDVVNGMLYLHELGVMHRDLKPDNILLDADDRAVIADFGLS-RFCHPTNDHTAETGTYRCVCTAVHFHK 291
G PL + L RIVK+V +G+ YLH GVMHRD+K N+LLD A + DFG+S RF +++TAETGTYR + V HK
Sbjct: 384 GSGPLDAPLLARIVKEVASGVAYLHYNGVMHRDIKTANVLLDESGHAKVTDFGISTRFGR--SEYTAETGTYRQMAPEVILHK 464
BLAST of mRNA_E-fasciculatus_F_contig14026.2952.1 vs. uniprot
Match: A0A804N6T5_MAIZE (Uncharacterized protein n=2 Tax=Andropogoneae TaxID=147429 RepID=A0A804N6T5_MAIZE) HSP 1 Score: 74.7 bits (182), Expect = 1.380e-13 Identity = 38/78 (48.72%), Postives = 48/78 (61.54%), Query Frame = 1
Query: 58 LRSTDLLRIVKDVVNGMLYLHELGVMHRDLKPDNILLDADDRAVIADFGLSRFCHPTNDHTAETGTYRCVCTAVHFHK 291
L T LL+ DV GM YLHE G++HRDLK N+L+D D +ADFG++RF TAETGTYR + V H+
Sbjct: 345 LNLTTLLKFAVDVCRGMCYLHERGIIHRDLKTANLLMDNDHAVKVADFGVARFQDQGGIMTAETGTYRWMAPEVINHQ 422
BLAST of mRNA_E-fasciculatus_F_contig14026.2952.1 vs. uniprot
Match: K3Y6F4_SETIT (Uncharacterized protein n=15 Tax=Panicoideae TaxID=147369 RepID=K3Y6F4_SETIT) HSP 1 Score: 74.3 bits (181), Expect = 1.910e-13 Identity = 38/78 (48.72%), Postives = 48/78 (61.54%), Query Frame = 1
Query: 58 LRSTDLLRIVKDVVNGMLYLHELGVMHRDLKPDNILLDADDRAVIADFGLSRFCHPTNDHTAETGTYRCVCTAVHFHK 291
L T LL+ DV GM YLHE G++HRDLK N+L+D D +ADFG++RF TAETGTYR + V H+
Sbjct: 352 LNLTTLLKFAVDVCRGMCYLHERGIIHRDLKTANLLMDKDHVVKVADFGVARFQDQGGIMTAETGTYRWMAPEVINHQ 429
BLAST of mRNA_E-fasciculatus_F_contig14026.2952.1 vs. uniprot
Match: A0A3L6SYF8_PANMI (Serine/threonine-protein kinase STY46-like n=1 Tax=Panicum miliaceum TaxID=4540 RepID=A0A3L6SYF8_PANMI) HSP 1 Score: 74.3 bits (181), Expect = 1.950e-13 Identity = 36/76 (47.37%), Postives = 47/76 (61.84%), Query Frame = 1
Query: 58 LRSTDLLRIVKDVVNGMLYLHELGVMHRDLKPDNILLDADDRAVIADFGLSRFCHPTNDHTAETGTYRCVCTAVHF 285
L T LL+ DV GM YLHE G++HRDLK N+L+D D +ADFG++RF TAETGTYR + + +
Sbjct: 371 LNPTTLLKFAVDVCRGMCYLHERGIIHRDLKTANLLMDKDHVVKVADFGVARFQDQEGIMTAETGTYRWMAPEIPY 446 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14026.2952.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14026.2952.1 >prot_E-fasciculatus_F_contig14026.2952.1 ID=prot_E-fasciculatus_F_contig14026.2952.1|Name=mRNA_E-fasciculatus_F_contig14026.2952.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=97bp GGGGAEREWGSGSCRGREPLRSTDLLRIVKDVVNGMLYLHELGVMHRDLKback to top mRNA from alignment at E-fasciculatus_F_contig14026:2421..3450- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14026.2952.1 ID=mRNA_E-fasciculatus_F_contig14026.2952.1|Name=mRNA_E-fasciculatus_F_contig14026.2952.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1030bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14026:2421..3450- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14026:2421..3450- >mRNA_E-fasciculatus_F_contig14026.2952.1 ID=mRNA_E-fasciculatus_F_contig14026.2952.1|Name=mRNA_E-fasciculatus_F_contig14026.2952.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=582bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14026:2421..3450- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |