mRNA_E-fasciculatus_F_contig14015.2945.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14015.2945.1 vs. uniprot
Match: A0A6H5KGP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGP9_9PHAE) HSP 1 Score: 381 bits (979), Expect = 1.620e-127 Identity = 219/279 (78.49%), Postives = 235/279 (84.23%), Query Frame = 1
Query: 4 KIMMEILARACSEGGTAQSPGGRVPDYTSVMYRMQIEEGLSFLVDALGKCERIVTTPVPRGYSRHTSRFLTVYGFTLPIVLVPHTELFTAPVVAAVCWGLFSIEEIAYFIEQPFDPEYRQLDLVTYATKVKVDVDRITDKSTVGRL-GAATPQLPGA-GAGAGAMMMPPSSYQEVGLPLVETGLSDNSGSGDEHNXXXXXXXXXXXXXXXXXXXXXXXAINGYASDENNGRDMSERNGFVGSQQK--VGDAKRGS-----SKVDKLSKCWKGGPDDDII 813
+IMMEILARACSEG AQSPGGRVPD+TSVMYR+QIEEGLSFLVDALGKCERI+TTPVPRGYSRHTSRFLTVYGFTLP+VLVPHTELFTAPVVAAVCWGLFSIEEIAYFIEQPFDPEYRQLDLVTYATKVKVDVDR+T+KSTVGR GAA PQLPGA GAGAG MM+ PSSYQEVG+PLV+T L+DN G D N XXXXXXXXXX INGYAS NNGRDMSERNG GSQQ+ VG G+ SKVDKLSKCWKG PD+D++
Sbjct: 264 QIMMEILARACSEGKAAQSPGGRVPDFTSVMYRVQIEEGLSFLVDALGKCERILTTPVPRGYSRHTSRFLTVYGFTLPLVLVPHTELFTAPVVAAVCWGLFSIEEIAYFIEQPFDPEYRQLDLVTYATKVKVDVDRLTEKSTVGRRPGAAAPQLPGARGAGAG-MMIHPSSYQEVGMPLVDTSLADNRGGVDSKNNGXXXXXXXXXX-----------TINGYASGVNNGRDMSERNGHGGSQQQKQVGGESSGAEKGPPSKVDKLSKCWKGDPDNDVV 530
BLAST of mRNA_E-fasciculatus_F_contig14015.2945.1 vs. uniprot
Match: D8LQQ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQQ4_ECTSI) HSP 1 Score: 233 bits (594), Expect = 1.310e-72 Identity = 112/116 (96.55%), Postives = 115/116 (99.14%), Query Frame = 1
Query: 4 KIMMEILARACSEGGTAQSPGGRVPDYTSVMYRMQIEEGLSFLVDALGKCERIVTTPVPRGYSRHTSRFLTVYGFTLPIVLVPHTELFTAPVVAAVCWGLFSIEEIAYFIEQPFDP 351
+IMMEILARACSEGG AQSPGGRVPDYTSVMYR+QIEEGLSFLVDALGKCERIVTTPVPRGYSRHTSRFLTVYGFTLP+VLVPHTELFTAPVVAAVCWGLFSIEEIAYFIEQPFDP
Sbjct: 167 QIMMEILARACSEGGAAQSPGGRVPDYTSVMYRVQIEEGLSFLVDALGKCERIVTTPVPRGYSRHTSRFLTVYGFTLPVVLVPHTELFTAPVVAAVCWGLFSIEEIAYFIEQPFDP 282
BLAST of mRNA_E-fasciculatus_F_contig14015.2945.1 vs. uniprot
Match: A0A836CJD6_9STRA (Bestrophin, RFP-TM, chloride channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJD6_9STRA) HSP 1 Score: 147 bits (371), Expect = 7.320e-37 Identity = 78/137 (56.93%), Postives = 96/137 (70.07%), Query Frame = 1
Query: 10 MMEILARACSEGGTAQSPGGRV-PDYTSVMYRMQIEEGLSFLVDALGKCERIVTTPVPRGYSRHTSRFLTVYGFTLPIVLVPHTELFTAPVVAAVCWGLFSIEEIAYFIEQPFDPEYRQLDLVTYATKVKVDVDRIT 417
M +++ A G + GGR D TSV YR+Q+E + LVD LG CERI+TTPVPR YSRHTSRFLTVY FTLP+VLV HT +TA VV +CWGL SIE IAY+IEQPFD +QL L +Y K+ +D+ RI+
Sbjct: 417 MTQVIQLAYGTCGGSGVNGGRCREDDTSVAYRLQMEVEVGKLVDFLGMCERILTTPVPRSYSRHTSRFLTVYLFTLPMVLVGHTGYWTAAVVGLICWGLLSIEGIAYYIEQPFDAGRQQLPLASYCQKMYMDITRIS 553
BLAST of mRNA_E-fasciculatus_F_contig14015.2945.1 vs. uniprot
Match: H6WBA7_VAULI (Uncharacterized protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBA7_VAULI) HSP 1 Score: 132 bits (332), Expect = 1.840e-32 Identity = 71/141 (50.35%), Postives = 88/141 (62.41%), Query Frame = 1
Query: 19 ILARACSEGGTAQSPGGRVPDYTSVMYRMQIEEGLSFLVDALGKCERIVTTPVPRGYSRHTSRFLTVYGFTLPIVLVPHTELFTAPVVAAVCWGLFSIEEIAYFIEQPFDPEYRQLDLVTYATKVKVDVDRITDKSTVGRL 441
+L R GT P + P V YR++IEE ++ L D +G CERI+ TPVPR YSRHTSR LTV+ TLPIVLVPHTE T VV + WG+ SIE IAY IEQPFD QL ++ Y + +VD I + + GRL
Sbjct: 220 VLQRMSQILGTLFPPSSK-PSQAKVFYRIKIEECINLLSDCVGLCERILNTPVPRSYSRHTSRLLTVFLLTLPIVLVPHTEFGTPLVVLLMGWGMLSIEGIAYLIEQPFDATNNQLPMINYCNNLFRNVDFIVSEKSYGRL 359
BLAST of mRNA_E-fasciculatus_F_contig14015.2945.1 vs. uniprot
Match: W7TTZ2_9STRA (Bestrophin-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TTZ2_9STRA) HSP 1 Score: 113 bits (283), Expect = 4.950e-25 Identity = 56/109 (51.38%), Postives = 73/109 (66.97%), Query Frame = 1
Query: 88 SVMYRMQIEEGLSFLVDALGKCERIVTTPVPRGYSRHTSRFLTVYGFTLPIVLVPHTELFTAPVVAAVCWGLFSIEEIAYFIEQPFDPEYRQLDLVTYATKVKVDVDRI 414
S Y + +E+ + LV+ LG ERI+ TPVP YSRHTSRFL++Y TLP VLV E+FTAPV+ VCWGLFSIEEI + IE+PF +QL L++ + DV +
Sbjct: 330 SDFYALYLEQLVGDLVNCLGMAERILLTPVPASYSRHTSRFLSLYTLTLPFVLVHQLEIFTAPVLGIVCWGLFSIEEIGHLIEEPFCASTKQLPLISMTETIARDVKHL 438
BLAST of mRNA_E-fasciculatus_F_contig14015.2945.1 vs. uniprot
Match: A0A0G4F397_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F397_VITBC) HSP 1 Score: 112 bits (279), Expect = 1.310e-24 Identity = 57/111 (51.35%), Postives = 73/111 (65.77%), Query Frame = 1
Query: 82 YTSVMYRMQIEEGLSFLVDALGKCERIVTTPVPRGYSRHTSRFLTVYGFTLPIVLVPHTELFTAPVVAAVCWGLFSIEEIAYFIEQPFDPEYRQLDLVTYATKVKVDVDRI 414
+T+ YR+QIE+ L L D +G CERI TP+P+ YSRHTSRFLTV+ TLP VLV L T + + WGLFSIEEI +FIE+PFD +QL L ++ DV+ I
Sbjct: 294 FTNPSYRVQIEKCLGTLCDVMGACERIAKTPIPKSYSRHTSRFLTVFCTTLPFVLVTKLGLLTPLAMFVLQWGLFSIEEIGHFIEEPFDYYNKQLTLADMCATIQRDVEDI 404
BLAST of mRNA_E-fasciculatus_F_contig14015.2945.1 vs. uniprot
Match: A0A7S1JXH1_9ALVE (Hypothetical protein (Fragment) n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1JXH1_9ALVE) HSP 1 Score: 105 bits (263), Expect = 5.280e-24 Identity = 52/104 (50.00%), Postives = 67/104 (64.42%), Query Frame = 1
Query: 109 IEEGLSFLVDALGKCERIVTTPVPRGYSRHTSRFLTVYGFTLPIVLVPHTELFTAPVVAAVCWGLFSIEEIAYFIEQPFDPEYRQLDLVTYATKVKVDVDRITD 420
+E + L +ALG CERI+ TPVP YSRHTSRFLT+Y TLP+VLV + T PVV +CWG +IEEI +FIE PFD QL L + ++ D++ D
Sbjct: 16 LENIIGHLSEALGGCERIMKTPVPLSYSRHTSRFLTLYCLTLPVVLVQSLQWMTIPVVTFMCWGFKAIEEIGHFIEDPFDKASFQLPLKGFCETIQADIEDTMD 119
BLAST of mRNA_E-fasciculatus_F_contig14015.2945.1 vs. uniprot
Match: A0A7S2V524_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V524_9STRA) HSP 1 Score: 109 bits (272), Expect = 5.460e-24 Identity = 56/114 (49.12%), Postives = 73/114 (64.04%), Query Frame = 1
Query: 79 DYTSVMYRMQIEEGLSFLVDALGKCERIVTTPVPRGYSRHTSRFLTVYGFTLPIVLVPHTELFTAPVVAAVCWGLFSIEEIAYFIEQPFDPEYRQLDLVTYATKVKVDVDRITD 420
D T+ YR ++ ++ L+D LG CERI TPVP YSRHTSRFLT+Y TLP VLV T VV +CWGLFSIEEI ++IE+PFD + QL L T + ++ + + D
Sbjct: 239 DITTFNYRTYLDNEITKLIDFLGMCERIKLTPVPLSYSRHTSRFLTLYMATLPFVLVNIAGNMTPFVVLGMCWGLFSIEEIGHYIEEPFDKKNAQLPLATISGNIQKALAALVD 352
BLAST of mRNA_E-fasciculatus_F_contig14015.2945.1 vs. uniprot
Match: M2Y919_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y919_GALSU) HSP 1 Score: 107 bits (268), Expect = 1.530e-23 Identity = 52/108 (48.15%), Postives = 74/108 (68.52%), Query Frame = 1
Query: 91 VMYRMQIEEGLSFLVDALGKCERIVTTPVPRGYSRHTSRFLTVYGFTLPIVLVPHTELFTAPVVAAVCWGLFSIEEIAYFIEQPFDPEYRQLDLVTYATKVKVDVDRI 414
V+ R ++E LS L++ L CERI+TTPVP GYSRHTSRFL+++ FT P+++V H + T PV A VCW LF+IEEI + IE PF ++L + + + + DVD +
Sbjct: 246 VVQRAKMEWQLSSLMEVLSGCERIITTPVPLGYSRHTSRFLSLWCFTFPLLVVSHFKFLTVPVTAFVCWSLFAIEEIGHVIEDPFLEGTQKLPIKSMISSLLADVDYV 353
BLAST of mRNA_E-fasciculatus_F_contig14015.2945.1 vs. uniprot
Match: A0A0G4ETN0_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ETN0_VITBC) HSP 1 Score: 106 bits (265), Expect = 1.480e-22 Identity = 53/106 (50.00%), Postives = 69/106 (65.09%), Query Frame = 1
Query: 97 YRMQIEEGLSFLVDALGKCERIVTTPVPRGYSRHTSRFLTVYGFTLPIVLVPHTELFTAPVVAAVCWGLFSIEEIAYFIEQPFDPEYRQLDLVTYATKVKVDVDRI 414
YR +E+ + L D LG CERI TP+P+ YSRHTSRFLTV+ TLP++LV L T V+ V W +FSIEEI +FIE+PFD +QL L ++ DV+ I
Sbjct: 309 YRASMEQVVGTLCDVLGACERIAKTPIPKSYSRHTSRFLTVFMATLPLILVTKLGLLTPLVMFVVGWAMFSIEEIGHFIEEPFDAVNKQLTLADMCATIQRDVEDI 414 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14015.2945.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14015.2945.1 >prot_E-fasciculatus_F_contig14015.2945.1 ID=prot_E-fasciculatus_F_contig14015.2945.1|Name=mRNA_E-fasciculatus_F_contig14015.2945.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=274bp MKIMMEILARACSEGGTAQSPGGRVPDYTSVMYRMQIEEGLSFLVDALGKback to top mRNA from alignment at E-fasciculatus_F_contig14015:585..3240+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14015.2945.1 ID=mRNA_E-fasciculatus_F_contig14015.2945.1|Name=mRNA_E-fasciculatus_F_contig14015.2945.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2656bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14015:585..3240+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14015:585..3240+ >mRNA_E-fasciculatus_F_contig14015.2945.1 ID=mRNA_E-fasciculatus_F_contig14015.2945.1|Name=mRNA_E-fasciculatus_F_contig14015.2945.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1644bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14015:585..3240+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |