prot_E-fasciculatus_F_contig1401.2942.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1401.2942.1
Unique Nameprot_E-fasciculatus_F_contig1401.2942.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length568
Homology
BLAST of mRNA_E-fasciculatus_F_contig1401.2942.1 vs. uniprot
Match: D8LF13_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF13_ECTSI)

HSP 1 Score: 773 bits (1996), Expect = 9.980e-277
Identity = 444/546 (81.32%), Postives = 458/546 (83.88%), Query Frame = 0
Query:    1 MEGEGGADVCEIFEGSEVLLAVRTLAKELLSIEIPSLKELALAFQAAFETSWHSLSAWFSVLTLFLSPVLQFLAVLARAVWPHAQTAAITVWKYQASLPVSTLCAEAAAVVLFVALVLLRRFIVRQRYLPRARTRVRNFRARINTAYGSFTRSVERNLRLSARAFPHVVYWTAAASLAWLAPGPTASLRDKCWVVVTATWPFVYASYLVLHVRDHNEVNGDDSADGSSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPGLAHGASVTPQDVDQVLMYWVVFTVARCWGLLAAYVPETFFTPYVRTVTFFLALWMHLPGPGGGLKVVYGWLEPLVYKYVRDLRMPQNGYTGTLKRVQDLLVFVRLLTAEQAELLVDNITDSWMLVPALAFFLTPSFMTELACLYAGLVIPSFNSIKTIGRRSNISA------------DSARERWLTYWVAYGGWWHLSLGLGGILRVLPLAAHFELALLLWLQVPLFRGGARMLDFLERCMVRLTYGSDVASTPV 534
            M  EGGADVCE  EGSEVLLA+RTL KELLSIE+PSLKE  LAFQAAFETSWHSLSAWFSVLTLFLSPVLQFLAVLARAVWPHAQTAAITV KYQASLP STLCAEAAAVVLF+ALVLLRRFIVRQRY+PRAR RVRNFRARINTAY SFT SVERNLRLSARAFPHVVYWTAAAS AWLAP  T SLRDK WV  TATWP +YA YLVL VR  N VN +DSA GSSV              XXXXXXXXXXXXXXXXXXXXXXXXXXXX               A  GLA GA V PQDVD+VLMYWVVFTVARCWGLLAAYVPETFFTPYVRTV FFLALWMHLPGPG GL+VVY WLEPLV+ YV+DLRMPQNGYTGTLKRVQDLLV VRLLT E+AELLVDNITDSWMLVPALAFFLTPSFMTELACLYAGLVIPSFNSIKT+GRRSN SA            DSAR RWLTYWVAYG WWHLSL LGGILRVLPLAAH ELALLLWLQVPLFRGG R+LDF ERCM R T+GSDVASTPV
Sbjct:    1 MVDEGGADVCEKIEGSEVLLALRTLVKELLSIEVPSLKEFVLAFQAAFETSWHSLSAWFSVLTLFLSPVLQFLAVLARAVWPHAQTAAITVCKYQASLPASTLCAEAAAVVLFIALVLLRRFIVRQRYIPRARRRVRNFRARINTAYMSFTASVERNLRLSARAFPHVVYWTAAASFAWLAPDLTGSLRDKFWVFATATWPTLYAVYLVLLVRSQNAVNDEDSAGGSSVNGTPAGAGTRGTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------ARSGLARGAGVMPQDVDRVLMYWVVFTVARCWGLLAAYVPETFFTPYVRTVAFFLALWMHLPGPGSGLQVVYAWLEPLVHTYVKDLRMPQNGYTGTLKRVQDLLVLVRLLTEEKAELLVDNITDSWMLVPALAFFLTPSFMTELACLYAGLVIPSFNSIKTLGRRSNTSAVSTAWAALATSADSARVRWLTYWVAYGSWWHLSLCLGGILRVLPLAAHAELALLLWLQVPLFRGGGRILDFGERCMDRWTFGSDVASTPV 531          
BLAST of mRNA_E-fasciculatus_F_contig1401.2942.1 vs. uniprot
Match: A0A835ZEP2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEP2_9STRA)

HSP 1 Score: 224 bits (571), Expect = 2.260e-61
Identity = 154/509 (30.26%), Postives = 239/509 (46.95%), Query Frame = 0
Query:   43 AFQAAFETSWHSLSAWFSVLTLFLSPVLQFLAVLARAVWPHAQTAAITVWKYQASLPVSTLCAEAAAVVLFVALVLLRRFIVRQRYLPRARTRVRNFRARIN-------TAYGSFTRSVERNLRLSARAFPHVVYWTAAASLAWLAPGPTASLR-DKCWVVVTATWPFVYASYLVLHVRDHNEVNGDDSADGSSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPGLAHGASVTPQDVDQVLMYWVVFTVARCWGLLAAYVPE---------TFFTPYVRTVTFFLALWMHLPGPGGGLKVVYGWLEPLVYKYVRDLRMPQNG-YTGTLKRVQDLLVFVRLLTAEQAELLVDNITDSWMLVPALAFFLTPSFMTELACLYAGLVIPSFNSIKTIGRRSNI---SADSARERWLTYWVAYGGWWHLSLGLGGILRVLPLAAHFELALLLWLQVPLFRGGARMLDFLERCMVRLTYGSDVA 530
            A   A   +W SL  W  +  L L P +     +   +WP  + A + + ++Q +  ++ +  EAA +   VA++LLRR+++R R LPRA++ +   RA +         A+    RSV +  +L+A+  PH++YW  AA+ A L P   A+L     W  VT  WP +     ++  R         SA                                              XXXXXXXX          PG         ++VD+ LMYW+VF +A+C   +   VP          T +   +R  T    +W+ LPG  GG+ + Y  +EPL+++Y+R +R P         K     LV +R+L+ E+A ++ +NI DSWML+P      +P F+    C+YAGL++P+ NS K +  R+ +   S   AR RWLTYW  +G +W+  + L  +L  LP A H +LALLLWLQ+P+FRG   +L  +E  +V  + G   +
Sbjct:   87 AASEAASYTWKSLVGWLRLAHLILKPFIGIANAIGMEIWPFVRAAGVGLARWQVTRSLTFILLEAALIGAVVAMLLLRRYMIRNRLLPRAQSWIEAKRALVRQRHDSAKAAFQQLQRSVAKKSKLAAQMLPHMLYWAVAAAAALLLPAHMAALSLGPAWEFVTVGWPILTT---IMLARGRKRSGASPSA-------------------ALDEGVKGGARPSIRAGTPSGKGKRGAXXXXXXXXQVAKPKGEEEPG--------GRNVDEALMYWIVFALAQCCAYVLGLVPGVGRLVLSTGTGWGLQLRMWTMLAGIWLQLPGSAGGIHMAYALIEPLIHEYIRAVRPPGGADAVARSKNGLSFLVTLRILSQERASMIAENIADSWMLLPTPLLVFSPGFVVRGGCMYAGLLVPAINSAKALAHRNTLIDNSQGGARTRWLTYWAVFGMYWYFQIALASLLAWLPFANHAQLALLLWLQLPVFRGSYYVLAKIESALVAFSLGGTAS 565          
BLAST of mRNA_E-fasciculatus_F_contig1401.2942.1 vs. uniprot
Match: A0A6H5K644_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K644_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 8.060e-37
Identity = 77/110 (70.00%), Postives = 82/110 (74.55%), Query Frame = 0
Query:  437 LVIPSFNSIKTIGRRSNISADS------------ARERWLTYWVAYGGWWHLSLGLGGILRVLPLAAHFELALLLWLQVPLFRGGARMLDFLERCMVRLTYGSDVASTPV 534
            L+ P     KT+GRRSN SA S            AR RWLTYWVAYG WWHLSL +GGILRVLPLAAH ELALLLWLQVPLFRGG R+LDF ERCM R T+GSDVASTPV
Sbjct:   21 LLAPIAALSKTLGRRSNNSAVSTAWAALATSANIARVRWLTYWVAYGSWWHLSLCVGGILRVLPLAAHAELALLLWLQVPLFRGGDRILDFGERCMDRWTFGSDVASTPV 130          
BLAST of mRNA_E-fasciculatus_F_contig1401.2942.1 vs. uniprot
Match: A0A7S2V8D4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8D4_9STRA)

HSP 1 Score: 138 bits (347), Expect = 3.630e-33
Identity = 87/241 (36.10%), Postives = 129/241 (53.53%), Query Frame = 0
Query:  302 VDQVLMYWVVFTV-ARC---WGLLAAYVPETFFTPYVRTVTFFLALWMHLPGPGGGLKVVYGWLEPLVYKYVRDLRMP--QNGYTGTLKRVQDLLVFVRLLTAEQAELLVDNITDSWMLVPALAFFLTPSFMTELACLYAGLVIPSFNSIKTIGRRSNISADSARERWLTYWVAYGGWWHLSLGLGGILRVLPLAAHFELALLLWLQVPLFRGGARMLDFLERCMVRLT--YGSDVASTPV 534
            + Q LMYWV+F     C   W   A  +P+    P    + FF  +WM LP   GG+ +++  LEPL+ KY++D++ P  +    G LK    + V + L++ E+   LV N+ DSW+LVPAL     PS  T    LYAG  +P+FNSIK++           +ERWL YW+ Y  +W + L L   L  +P   HF L L++WLQ+P FRG  R++  + R +  L   + S   +TP+
Sbjct:    7 LQQCLMYWVLFAAFVLCNYLWSTFAWRLPQM---PCGAEMVFFFFVWMQLPF--GGVSILFHQLEPLIRKYIKDIKRPIGKEESLGYLK----VAVTLGLISKERGHALVSNLLDSWLLVPALLGLTMPSPFTYAFSLYAGAAVPAFNSIKSLKAEQE---GPNQERWLRYWMCYAPFWVVHLALDSHLWFVPFLYHFWLLLVMWLQLPYFRGAQRIVQTVGREINALVEDFNSRRPTTPI 235          
BLAST of mRNA_E-fasciculatus_F_contig1401.2942.1 vs. uniprot
Match: A0A7S3LQR1_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LQR1_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 5.070e-8
Identity = 63/252 (25.00%), Postives = 98/252 (38.89%), Query Frame = 0
Query:  300 QDVDQVLMYWVVFTVARCWGLLAAYVPETFFTPYVRTVTFFLALWMHLPGPGGGLKVVYGWLEPLVYKYVRDLRMPQNGYTGTLKRVQDLLVFVRLLTAEQAELLVDNI--TDSWMLVPALAFFLTPSFMTELACLYAGLVIPSFNSIKTI---------GRRSNISADSARER---------------------------WLTYWVAYGGWWHLSLGLGGI-LRVLPLAAHFELALLLWLQVPLFRGGARM 512
            Q V   L YW + +VA     L          P         +LW+ +PG  G   + + ++ PLV KY + + +P  G + T +     +VF +L  +E+    +  +  T   +L   L     PS  T + C+  GL  P ++ I  +          RRS    D+  +R                           WL YWV Y  +  +  GL  + L   P     +L L+LWLQ+P FRG  R+
Sbjct:  398 QSVLYWLRYWTILSVALVGEQLPIIGHIIRLLPVWPAARLIFSLWLQVPGTSGA-DLAFEFVVPLVAKYWKRIDLP--GPSSTTQNFALNMVFSQLPVSEETRTKMTEVAETGGTLLFTTLPLLFMPSIFTTIGCVVVGLGKPMYSGIVAVLAVEKAAQKARRSLNKKDNRNKRSSVNRLLRHVPGGGDMGVAAAALHCTQWLEYWVVYTSFMFVH-GLASVFLFWFPFWVQMQLLLILWLQLPYFRGSRRI 645          
BLAST of mRNA_E-fasciculatus_F_contig1401.2942.1 vs. uniprot
Match: A0A1R3GFJ1_COCAP (HVA22-like protein n=2 Tax=Corchorus TaxID=93758 RepID=A0A1R3GFJ1_COCAP)

HSP 1 Score: 58.9 bits (141), Expect = 2.330e-6
Identity = 29/86 (33.72%), Postives = 48/86 (55.81%), Query Frame = 0
Query:  427 MTELACLYAGLVIPSFNSIKTIGRRSNISADSARERWLTYWVAYGGWWHLSLGLGGILRVLPLAAHFELALLLWLQVPLFRGGARM 512
            +T  AC   G+VIP +++ + I R      ++ R++WLTYW AYG +  + +    +L   P   HF+ A L+WLQ+P   G  ++
Sbjct:   26 VTRAACCSVGVVIPVYSTFRAIERHD----ENERQKWLTYWAAYGSFTLVEVFSDKLLFWFPYYYHFKFAFLVWLQLPSTEGAKKI 107          
BLAST of mRNA_E-fasciculatus_F_contig1401.2942.1 vs. uniprot
Match: A0A2V3ITW0_9FLOR (Protein HVA22 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITW0_9FLOR)

HSP 1 Score: 60.8 bits (146), Expect = 4.360e-6
Identity = 63/231 (27.27%), Postives = 103/231 (44.59%), Query Frame = 0
Query:  296 SVTPQDVDQV--LMYWVVFTVA-RCWGLLAAYVPETF--FTPYVRTVTFFLALWMHLPGPGGGLKVVYGWLEPLVYKYVRD-LRMPQNGYTGTLKRVQDLLVFVRLLTA------EQAELLVDNITDSWMLVPALAFFLTPSFMTELACLYAGLVIPSFNSIKTIGRRSNISADSARERWLTYWVAYGGWWHLSLGLGGILRVLPLAAHFELALLLWLQVPLFRGGARMLD 514
            SV  QD  ++  L  WVVF +A  C  L   + P+    F      + F+  +W  L    G  +V+Y     ++ +  R  LR P+       + VQ L +F+RLL A      +Q   L     +S + +    F +TP  +T +  +  GL++P++ +I  I   +       R  WL+YW                L  LPL  H ++ +++WLQ+P FRG + +LD
Sbjct:  283 SVPNQDKAELKALRSWVVFGIAWGCRSLSWYFCPQLLEHFVTSFDILLFYFFVWAELELTKGA-EVLYS----IIARTSRSRLRKPRG------EGVQKLNIFLRLLVAAGILKDDQTSDLFGFAAESGLTLLGTIFLITPRMLTFVGTVAIGLMMPAYLTIAVI--EAGDPKGLYRYNWLSYWSVLSLIEAAYTAASNRLGWLPLWYHVKMCVVMWLQLPYFRGASTLLD 500          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1401.2942.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LF13_ECTSI9.980e-27781.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZEP2_9STRA2.260e-6130.26Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5K644_9PHAE8.060e-3770.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2V8D4_9STRA3.630e-3336.10Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3LQR1_9STRA5.070e-825.00Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A1R3GFJ1_COCAP2.330e-633.72HVA22-like protein n=2 Tax=Corchorus TaxID=93758 R... [more]
A0A2V3ITW0_9FLOR4.360e-627.27Protein HVA22 n=1 Tax=Gracilariopsis chorda TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004345TB2/DP1/HVA22-related proteinPFAMPF03134TB2_DP1_HVA22coord: 440..509
e-value: 1.7E-7
score: 31.0
IPR004345TB2/DP1/HVA22-related proteinPANTHERPTHR12300HVA22-LIKE PROTEINScoord: 434..521
NoneNo IPR availablePANTHERPTHR12300:SF22RECEPTOR EXPRESSION-ENHANCING PROTEINcoord: 434..521
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 484..488
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 507..567
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 489..506
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 337..361
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..80
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..56
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 362..416
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 463..483
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 100..119
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 306..325
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 443..462
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 417..442
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 211..305
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 120..191
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 192..210
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 326..336
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 81..99
NoneNo IPR availableTMHMMTMhelixcoord: 420..442
NoneNo IPR availableTMHMMTMhelixcoord: 193..212
NoneNo IPR availableTMHMMTMhelixcoord: 55..77
NoneNo IPR availableTMHMMTMhelixcoord: 339..361
NoneNo IPR availableTMHMMTMhelixcoord: 304..326
NoneNo IPR availableTMHMMTMhelixcoord: 97..119
NoneNo IPR availableTMHMMTMhelixcoord: 463..485

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1401contigE-fasciculatus_F_contig1401:10420..14520 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1401.2942.1mRNA_E-fasciculatus_F_contig1401.2942.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1401 9943..14567 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1401.2942.1 ID=prot_E-fasciculatus_F_contig1401.2942.1|Name=mRNA_E-fasciculatus_F_contig1401.2942.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=568bp
MEGEGGADVCEIFEGSEVLLAVRTLAKELLSIEIPSLKELALAFQAAFET
SWHSLSAWFSVLTLFLSPVLQFLAVLARAVWPHAQTAAITVWKYQASLPV
STLCAEAAAVVLFVALVLLRRFIVRQRYLPRARTRVRNFRARINTAYGSF
TRSVERNLRLSARAFPHVVYWTAAASLAWLAPGPTASLRDKCWVVVTATW
PFVYASYLVLHVRDHNEVNGDDSADGSSVDGTPAGAGTRGAVVKTTGLRT
PGAGTPGTGTPRAVTPRVVTPRAGTSRAGMPRAGTPATPGLAHGASVTPQ
DVDQVLMYWVVFTVARCWGLLAAYVPETFFTPYVRTVTFFLALWMHLPGP
GGGLKVVYGWLEPLVYKYVRDLRMPQNGYTGTLKRVQDLLVFVRLLTAEQ
AELLVDNITDSWMLVPALAFFLTPSFMTELACLYAGLVIPSFNSIKTIGR
RSNISADSARERWLTYWVAYGGWWHLSLGLGGILRVLPLAAHFELALLLW
LQVPLFRGGARMLDFLERCMVRLTYGSDVASTPVTLRFLVQCCGELRFKR
PKLLVCSKGIYHVVNGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004345TB2_DP1_HVA22