mRNA_E-fasciculatus_F_contig14005.2940.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14005.2940.1 vs. uniprot
Match: D8LFY1_ECTSI (Diphthine--ammonia ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFY1_ECTSI) HSP 1 Score: 618 bits (1594), Expect = 2.590e-214 Identity = 381/475 (80.21%), Postives = 390/475 (82.11%), Query Frame = 1
Query: 1 RQQVLDETVVVNHSDDMFAPVGLLRVVKCHTEPKTPPLSGGGISAT-GDTGKDGATSGAALPTAETAGSGGLVYLSGVRSAARWPGAGGXXXXXXXXXXXRQAADCLAAARAGLAGVAVCLRDVCFVHLYLSDMGLFSAVNEEYCKWFEGENPPSRSCVSVPLPPGCSVMLDLVALRGGGEALAKEGAACEQRQVLHVRSISSWAPVCIGPYCQANTLGPGGGFALIAGQIGLQAASMTFPDRRR-RPRPLPAPCAGGATSKEGTSERRPIHEQELSLCVSHASSVASAVGASVSRGCVFATLYVSQEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAHATGRTDEEGGGAGDGRRDTGSTGICDAGTSPEEAAPXXXXXXXXXXXXGWLEGMVNECRVLMEGRLSQEQAEAAAEAAGTXXXXXXXSAEDGWTSDPEELAKEAARKMVLARRVPILPVVVPSLPRNATVELE 1419
R+ VLDETVVVNHSDDMFAPVGLLRVVKCHTEPKTPPL+GG ISA +TGKD AT G AL TAE GSGGLVYLSGVR+AARWPGAG XXXXXXXXXXRQAADCL AAR GL G+ VCLRDVCFVHLYL DM LFSAVNEEYCKWFEGENPPSRSCVSVPLP GCSVMLDLVALRG GEALAKEGAAC QRQVLHVRSISSWAPVCIGPYCQANTLGPGGGFAL+AGQIGLQAASMTFP RR RP P PCAGGATSKE SERRPIHEQELSLCVSHASSVASAVGASVSRGCVFATLYVS+EAXXXXXXXXXXXXXX A A A RTDEEG AG+GR DT T DAGTS AP G LEGMV+ECRVLMEGRLSQEQAEAAAEAAGT SAEDGWTSDPEELAKEA RKMVLARRVPIL VVVPSLPRNA VELE
Sbjct: 170 RKLVLDETVVVNHSDDMFAPVGLLRVVKCHTEPKTPPLTGGSISAADNNTGKDNATGGTALSTAE--GSGGLVYLSGVRAAARWPGAG--XXXXXXXXXXRQAADCLEAARTGLEGIGVCLRDVCFVHLYLRDMRLFSAVNEEYCKWFEGENPPSRSCVSVPLPLGCSVMLDLVALRGSGEALAKEGAACAQRQVLHVRSISSWAPVCIGPYCQANTLGPGGGFALVAGQIGLQAASMTFPARRSGRP---PVPCAGGATSKEAISERRPIHEQELSLCVSHASSVASAVGASVSRGCVFATLYVSEEAXXXXXXXXXXXXXXVAAH-----------AKAGAMDRTDEEGAVAGEGRGDTRRTSSSDAGTSAGAXAPAGGSG-------GCLEGMVDECRVLMEGRLSQEQAEAAAEAAGTEGGEDGDSAEDGWTSDPEELAKEAPRKMVLARRVPILAVVVPSLPRNAAVELE 619
BLAST of mRNA_E-fasciculatus_F_contig14005.2940.1 vs. uniprot
Match: A0A6H5K721_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K721_9PHAE) HSP 1 Score: 372 bits (954), Expect = 2.650e-120 Identity = 233/312 (74.68%), Postives = 240/312 (76.92%), Query Frame = 1
Query: 505 MLDLVALRGGGEALAKEGAACEQRQVLHVRSISSWAPVCIGPYCQANTLGPGGGFALIAGQIGLQAASMTFPDRRR-RPRPLPAPCAGGATSKEGTSERRPIHEQELSLCVSHASSVASAVGASVSRGCVFATLYVSQEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAHATG----RTDEEGGGAGDGRRDTGSTGICDAGTSPEEAAPXXXXXXXXXXXXGWLEGMVNECRVLMEGRLSQEQAEAAAEAAGTXXXXXXX-SAEDGWTSDPEELAKEAARKMVLARRVPILPVVVPSLPRNATVELEV 1422
MLDLVALRG GEALAKEGAAC QRQVLHVRSISSWAPVCIGPYCQANTLGPGGGFAL+AGQIGLQAASMTFP RR RP PAPCAGG+ SKE SE RPIHEQELSLCVSHASSVASAVGASVSRGCVFATLYVS+EAXXXXXXXX AVAHAT RTDEEGG AG+GR DT DAGTS AAP G LEGMV+ECRVLMEG+L+QEQAEAAAE AGT SAEDGWTSDPEELAKEAARKMVLARRVPIL VVVPSLPRNATVELEV
Sbjct: 1 MLDLVALRGSGEALAKEGAACAQRQVLHVRSISSWAPVCIGPYCQANTLGPGGGFALVAGQIGLQAASMTFPARRSGRP---PAPCAGGSASKEAMSETRPIHEQELSLCVSHASSVASAVGASVSRGCVFATLYVSEEAXXXXXXXXTA-------------------AVAHATAGVMDRTDEEGGVAGEGRGDTRRPSSSDAGTSAGAAAPAGGSG-------GSLEGMVDECRVLMEGKLTQEQAEAAAEVAGTEGGGEDDDSAEDGWTSDPEELAKEAARKMVLARRVPILAVVVPSLPRNATVELEV 283
BLAST of mRNA_E-fasciculatus_F_contig14005.2940.1 vs. uniprot
Match: A0A835YTU4_9STRA (Diphthine--ammonia ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTU4_9STRA) HSP 1 Score: 144 bits (363), Expect = 1.680e-33 Identity = 137/315 (43.49%), Postives = 158/315 (50.16%), Query Frame = 1
Query: 1 RQQVLDETVVVNHSDDMFAPVGLLRVVKCHTEPKTPPLSGGGISATGDTGKDGATSGAALPTAETAGSGGLVYLSGVRS------AARWPGAGGXXXXXXXXXXXRQAADCLAAARAGLAGVAVCLRDVCFVHLYLSDMGLFSAVNEEYCKWFE--GENPPSRSCVSVPLPPGCSVMLDLVALRGGGEALAKEGAACEQRQVLHVRSISSWAPVCIGPYCQANTLGPGGGFALIAGQIGLQAASMTFPDRRRRPRPLPAPCAGGATSKEGTSERRPIHEQELSLCVSHASSVASAVGASVSRGCVFATLYVSQEA 921
R+ VLDET VV HSDDMFAPV LLRVV+C T K A G + A L A S G +++S + +A G XXXXXXXXXXX A A LA DV FVHLYL+DM F+AVN Y FE PPSR+CV LPP +VMLD VA RG A G A + R L VRS+S WAPVCIGPY QAN L G L++GQIGL SM A GG + EL CV HA+ V A+GAS SR + ATLYV+ A
Sbjct: 170 RRLVLDETEVVMHSDDMFAPVALLRVVRCSTADKMAEERERDAQAMASIGHPDLRAAAELEQL-LADSSGHIHVSSITCPPDSLPSATSAGXXXXXXXXXXXXXXXXXXXXXXAHDASLA-------DVVFVHLYLADMAHFAAVNAAYAAAFEPAAAAPPSRACVQARLPPPYAVMLDCVAQRGS--APRPRGPA-QDRATLLVRSLSPWAPVCIGPYSQANCLVGSGALVLLSGQIGLLPCSM-------------AVAPGGL-------------DGELGWCVRHAARVLRALGASASRSVLCATLYVTASA 447
BLAST of mRNA_E-fasciculatus_F_contig14005.2940.1 vs. uniprot
Match: K3WAR1_GLOUD (Diphthine--ammonia ligase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAR1_GLOUD) HSP 1 Score: 124 bits (310), Expect = 1.210e-26 Identity = 93/248 (37.50%), Postives = 120/248 (48.39%), Query Frame = 1
Query: 10 VLDETVVVNHSDDMFAPVGLLRVVKCHTEPKTP----------PLSGGGISATGDTG----KDGATSGAALPTAETAGSGGLVYLSGVRSAARWPGAGGXXXXXXXXXXXRQAADCLAAARAGLAGVAVCLRDVCFVHLYLSDMGLFSAVNEEYCKWFEGENPPSRSCVSVPLPPGCSVMLDLVALRGGGEALAKEGAACEQRQVLHVRSISSWAPVCIGPYCQANTLGPGGGFALIAGQIGLQAASM 711
V+D + VV HSDD FAPV L + KCH E K P P+S T K G TS AL A L R+ G ++ + A+ LA ++ L DVCFVHLY+ DM F +N EYCK+F PPSRSCV V P V++D + +RG GE+ ++ + R VLHV+SIS+WAP CIGPY QAN L L+AGQ+ +M
Sbjct: 223 VIDSSRVVLHSDDYFAPVAFLVIEKCHLEDKEPASPSKLAPRLPISSFVPDLTRSVQEKLQKSGTTSAIALAQTTQADRAFLPAHHQFRNLFHLSGF--MCSNSASLTLEQEIKEIFDHAKDTLAKESMTLEDVCFVHLYVQDMNQFGQINAEYCKYFGAHMPPSRSCVEVGSLPA-RVLMDCIGIRGSGESKLRQSSRVT-RDVLHVKSISTWAPNCIGPYSQANILHKS--LILLAGQVSFLPQTM 464
BLAST of mRNA_E-fasciculatus_F_contig14005.2940.1 vs. uniprot
Match: K8YYW5_NANGC (Diphthine--ammonia ligase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YYW5_NANGC) HSP 1 Score: 121 bits (303), Expect = 1.320e-25 Identity = 104/306 (33.99%), Postives = 135/306 (44.12%), Query Frame = 1
Query: 1 RQQVLDETVVVNHSDDMFAPVGLLRVVKCHTEPKTPP--------------------------LSGGGISATGDT----------------------------GKDGATSGAALPTAETAGSGGLVYLSGVRSAARWPGAGGXXXXXXXXXXXRQAADCLAAARAGLAGVAVCLRDVCFVHLYLSDMGLFSAVNEEYCKW-FEGENPPSRSCVSVPLP------PGC------SVMLDLVALRGGGEALAKEGAACEQRQVLHVRSISSWAPVCIGPYCQANTLGPGGGFALIAGQIGLQAASMTF 717
R+ VLD+T VV HSDD++ PVGLL + +CH E K L+ GG S + ++ G+ SG +PT V+ G S+ AG Q CL + L + L DV VHLYL M F+AVN EYC+ F +PPSRSCV +PL C V+LD++AL G G A+ + + + RQVLHV+S+S WAPVCIGPY QAN L G A +AGQIGL A+M
Sbjct: 145 RRLVLDDTEVVIHSDDVYTPVGLLHIHRCHAEFKEESSPTETSKGNEPNRCLVLPLEVAIVRSLADGGPSTSAESLGSQACAVAPGKRARKWRIRPQPHVWRQGRVLNISGYCVPTPR-------VHFQGADSSTHGEAAG-------------QMRLCLEGVQRVLLEHGLSLHDVVVVHLYLRSMASFAAVNAEYCRAPFHPHHPPSRSCVELPLARPYDDEEACRGWEEVEVLLDVMALAGSGAAM--DAGSFQPRQVLHVKSLSGWAPVCIGPYSQANLLSHGH-LAFLAGQIGLDPATMVL 427
BLAST of mRNA_E-fasciculatus_F_contig14005.2940.1 vs. uniprot
Match: A0A329SV09_9STRA (Diphthine--ammonia ligase n=20 Tax=Phytophthora TaxID=4783 RepID=A0A329SV09_9STRA) HSP 1 Score: 115 bits (289), Expect = 7.570e-24 Identity = 95/251 (37.85%), Postives = 116/251 (46.22%), Query Frame = 1
Query: 10 VLDETVVVNHSDDMFAPVGLLRVVKCHTE--------------PKTPPLSGGGISATGDTGKDGATSGAALPTAETAGSGGLVYLSG-VRSAARWPGAGGXXXXXXXXXXXRQAADCLAAARAGLAGVAVCLRDVCFVHLYLSDMGLFSAVNEEYCKWFEGENPPSRSCVSVPLPPG--CSVMLDLVALRGGGEALAKEGAACEQRQVLHVRSISSWAPVCIGPYCQANTLGPGGGFALIAGQIGLQAASM 711
V+DE+ V HSDD APV L + KCH E P+TPP T T K AT A P A + +V G R G + AD +A L + L DVCFVHLY+ DM F +N EY ++ PPSRSCV V V+LD ALRG G + K + +R VLHV+SIS+WAP CIGPY QAN L L+AGQI L +M
Sbjct: 223 VIDESHTVLHSDDYIAPVAFLSIDKCHLEDKEPADPSHLASRIPETPPTQPSSNENT--TEKKPATMLALTPEAAQS----VVPAFGQFRDQLHLSGIMSSKAGDESITLEEEMADVIAQLETILESQKMVLADVCFVHLYVQDMSSFGQLNAEYIRYLGQNLPPSRSCVEVKALANVPARVLLDCFALRGSG--VQKLQSLRVRRDVLHVKSISAWAPCCIGPYSQANVLHRA--LILLAGQIALHPQTM 463
BLAST of mRNA_E-fasciculatus_F_contig14005.2940.1 vs. uniprot
Match: A0A5D6XTH2_9STRA (Diphthine--ammonia ligase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTH2_9STRA) HSP 1 Score: 115 bits (288), Expect = 9.430e-24 Identity = 93/249 (37.35%), Postives = 122/249 (49.00%), Query Frame = 1
Query: 10 VLDETVVVNHSDDMFAPVGLLRVVKCHTEPKTPP----LSGGGISA--------TGDTGKDGATS---GAALPTAETAGSGGLVYLSGVRSAARWPGAGGXXXXXXXXXXXRQAADCLAAARAGLAGVAVCLRDVCFVHLYLSDMGLFSAVNEEYCKWFEGENPPSRSCVSVPLPPGCSVMLDLVALRGGGEALAKEGAACEQRQVLHVRSISSWAPVCIGPYCQANTLGPGGGFALIAGQIGLQAASM 711
V+D + VV HSDD FAPV L + +CH E K P L+ +S DT + A + AL T L + S R+ G + D RA L ++ L DVCFVHLY+ DM F+ +N+EYC++F PPSRSCV V P V+LD V +RG G++ K A+ R VLH+ SIS+WAP CIGPY QAN L L+AGQ+ +M
Sbjct: 179 VIDSSRVVLHSDDFFAPVAFLVIEECHLEEKEPASPSQLASRLLSTDHPDRFQLNADTVSEDAIAVQPANALATLAPDDRAFLPHHSQFRNIFHLSGV--MSARSATLTLKEEMNDVFDHVRAALEKESMTLEDVCFVHLYVRDMHSFAQINDEYCRFFSLRMPPSRSCVEVSALPA-RVLLDCVGVRGSGKS--KLLASRVVRDVLHITSISAWAPNCIGPYSQANILHKS--LILLAGQVAFLPQTM 420
BLAST of mRNA_E-fasciculatus_F_contig14005.2940.1 vs. uniprot
Match: A0A3R7HKR9_9STRA (Diphthine--ammonia ligase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HKR9_9STRA) HSP 1 Score: 114 bits (285), Expect = 2.420e-23 Identity = 90/253 (35.57%), Postives = 114/253 (45.06%), Query Frame = 1
Query: 10 VLDETVVVNHSDDMFAPVGLLRVVKCHTE-----------------PKTPPLSGGGISATGDTGKDGATSGAALPTAETAGSGGLVYLSGVRSAARWPGAGGXXXXXXXXXXXRQAADCLAAARAGLAGVAVCLRDVCFVHLYLSDMGLFSAVNEEYCKWFEGENPPSRSCVSVPLPPGCS--VMLDLVALRGGGEALAKEGAACEQRQVLHVRSISSWAPVCIGPYCQANTLGPGGGFALIAGQIGLQAASM 711
V+DE V HSDD PV L + +CH E P TPP + I+ T + AL A+ G + S R G + AD +A + L + L DVCFVH+Y+ DM +F +N EY ++ PPSRSCV V V++D ALRG GE K +R VLHV+SISSWAP CIGPY QAN L F +AGQI L +M
Sbjct: 214 VIDEFHTVLHSDDYITPVAFLSIDECHLEDKEAPNPSQLASRISSPPSTPPANTAKIATNSKT-----ATVLALSPADARGM--VPTYSRFRDQLHLSGIMSSKIGDESLSLEEEMADVIAQIKEALKDNGMVLSDVCFVHMYVQDMAMFGQINAEYIRFLGQNLPPSRSCVEVAALANAPARVLVDCFALRGSGEQ--KLLPLRVRRDVLHVQSISSWAPCCIGPYSQANVLHKA--FITLAGQIALCPQTM 455
BLAST of mRNA_E-fasciculatus_F_contig14005.2940.1 vs. uniprot
Match: A0A6A3YVN2_9STRA (Diphthine--ammonia ligase n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YVN2_9STRA) HSP 1 Score: 114 bits (285), Expect = 2.440e-23 Identity = 91/250 (36.40%), Postives = 114/250 (45.60%), Query Frame = 1
Query: 10 VLDETVVVNHSDDMFAPVGLLRVVKCHTEPKTP----------PLSGGGISATGDTGKDGATSGAALPTAETAGSGGLVYLSGVRSAARWPGAGGXXXXXXXXXXXRQAADCLAAARAGLAGVAVCLRDVCFVHLYLSDMGLFSAVNEEYCKWFEGENPPSRSCVSVP----LPPGCSVMLDLVALRGGGEALAKEGAACEQRQVLHVRSISSWAPVCIGPYCQANTLGPGGGFALIAGQIGLQAASMTF 717
V+DE+ V HSDD APV L + KCH E K P P + AT T + A + L A L R G + AD +A A L + L DVCFVHLY+ DM F +N EY ++ PPSRSCV + +P V+LD ALRG G+ + +R VLHV+SIS+WAP CIGPY QAN L L+AGQI L +M
Sbjct: 223 VIDESHTVLHSDDYVAPVAFLSIDKCHLEDKEPSDPSHLASRIPETSSVQPATSSTTME-AKAATVLALAPQPAKHVLPAFGRFRDQLHLSGVMSSKAGDASISLQEEMADVVAQVEAILKSEDMVLADVCFVHLYVQDMATFGELNAEYIRYLGQNLPPSRSCVELKALADVP--ARVLLDCYALRGSGKHKLQRLRV--RRDVLHVKSISAWAPCCIGPYSQANVLHRA--LILLAGQIALHPQTMNL 465
BLAST of mRNA_E-fasciculatus_F_contig14005.2940.1 vs. uniprot
Match: A0A383WGJ8_TETOB (Diphthine--ammonia ligase n=2 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WGJ8_TETOB) HSP 1 Score: 114 bits (286), Expect = 2.650e-23 Identity = 69/145 (47.59%), Postives = 85/145 (58.62%), Query Frame = 1
Query: 304 AADCLAAARAGLAGVAVCLRD-------VCFVHLYLSDMGLFSAVNEEYCKWFEGENPPSRSCVSVPLPPGCSVMLDLVALRGGGEALAKEGAACEQRQVLHVRSISSWAPVCIGPYCQANTLGPGGGFALIAGQIGLQAASMTF 717
AAD AA A L+ VA L+ CFVHLYL+DM F A NE YC+ +PPSR+CV VPLP GC V+LD++ R + ++ R+VLHV+SISSWAP CIGPY QA + G +AGQI L ASM
Sbjct: 347 AADTAAALDAALSAVAAQLQQRGLSWLRSCFVHLYLADMANFGAANEAYCRHLPQVDPPSRACVQVPLPAGCPVLLDVLFARQPDQQQQQQPL---DRRVLHVQSISSWAPSCIGPYSQATSCN---GLIYMAGQIPLDPASMAI 485 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14005.2940.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14005.2940.1 >prot_E-fasciculatus_F_contig14005.2940.1 ID=prot_E-fasciculatus_F_contig14005.2940.1|Name=mRNA_E-fasciculatus_F_contig14005.2940.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=474bp RQQVLDETVVVNHSDDMFAPVGLLRVVKCHTEPKTPPLSGGGISATGDTGback to top mRNA from alignment at E-fasciculatus_F_contig14005:120..3442- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14005.2940.1 ID=mRNA_E-fasciculatus_F_contig14005.2940.1|Name=mRNA_E-fasciculatus_F_contig14005.2940.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3323bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14005:120..3442- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14005:120..3442- >mRNA_E-fasciculatus_F_contig14005.2940.1 ID=mRNA_E-fasciculatus_F_contig14005.2940.1|Name=mRNA_E-fasciculatus_F_contig14005.2940.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2844bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14005:120..3442- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |