prot_E-fasciculatus_F_contig14.2933.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14.2933.1
Unique Nameprot_E-fasciculatus_F_contig14.2933.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length103
Homology
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BLAST of mRNA_E-fasciculatus_F_contig14.2933.1 vs. uniprot
Match: A0A6H5L9F0_9PHAE (Fibronectin type-III domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9F0_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 2.700e-52
Identity = 77/103 (74.76%), Postives = 89/103 (86.41%), Query Frame = 0 
Query:    1 MNMTYGLRCKSSNATSVVLEWHQRATRYIVEYKPTNEQWGGQGCRRERTGMGAPSILVVSDLQPSTSYVFRLHAANEVGQFGDPGPEVIIRTEGRQS-CCVVS 102
            MNMTYGLRC+SSN+TS+VLEWH+RA RY+VEYK  +E+WGG+GCR E TG GAPSILVVS LQPST YVFRLH+AN   QFGDPGPEV+  T+GR+S CCVVS
Sbjct:    1 MNMTYGLRCQSSNSTSIVLEWHERAPRYLVEYKRASEEWGGRGCRAEHTGCGAPSILVVSQLQPSTDYVFRLHSANAECQFGDPGPEVVFSTKGRKSGCCVVS 103
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14.2933.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L9F0_9PHAE2.700e-5274.76Fibronectin type-III domain-containing protein n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 1..81
e-value: 3.6E-4
score: 29.9
IPR003961Fibronectin type IIIPFAMPF00041fn3coord: 6..82
e-value: 6.3E-10
score: 39.3
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 3..95
score: 15.432
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 2..98
e-value: 1.5E-11
score: 46.5
IPR036116Fibronectin type III superfamilySUPERFAMILY49265Fibronectin type IIIcoord: 6..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14contigE-fasciculatus_F_contig14:54551..56152 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14.2933.1mRNA_E-fasciculatus_F_contig14.2933.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14 54085..56853 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14.2933.1 ID=prot_E-fasciculatus_F_contig14.2933.1|Name=mRNA_E-fasciculatus_F_contig14.2933.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=103bp
MNMTYGLRCKSSNATSVVLEWHQRATRYIVEYKPTNEQWGGQGCRRERTG
MGAPSILVVSDLQPSTSYVFRLHAANEVGQFGDPGPEVIIRTEGRQSCCV
VS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036116FN3_sf
IPR013783Ig-like_fold
IPR003961FN3_dom