prot_E-fasciculatus_F_contig14.2930.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14.2930.1
Unique Nameprot_E-fasciculatus_F_contig14.2930.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length194
Homology
BLAST of mRNA_E-fasciculatus_F_contig14.2930.1 vs. uniprot
Match: A0A6H5L318_9PHAE (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L318_9PHAE)

HSP 1 Score: 358 bits (920), Expect = 7.120e-125
Identity = 182/195 (93.33%), Postives = 185/195 (94.87%), Query Frame = 0
Query:    1 MVALSWGCRLIAGRT--EACSVSVLSLLLLLACAVPGVSFIQGRGIVRQRTFSYGVGRIGRLQASSKGAYPPPSRRLRGRGLCMDARSCAPEITDDSFEAEVLNEDRPVLVFFRAPWCGPCRMVGPIVDEVIAEHGGKLKVLELCTDENPKTVAEFKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHMDL 193
            MVALSWGCRLIAGRT  EACSV    LLLLLACA PGVSFIQGRG+ RQRTFSYGVGRIGRLQASSKGAYPPPSRRLRGRGLCMDA SCAPEITDDSFEAEVL+EDRPVLVFFRAPWCGPCRMVGPIVDEVIA+HG KLKVLELCTDENPKTVAEFKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHMDL
Sbjct:    1 MVALSWGCRLIAGRTAGEACSV----LLLLLACATPGVSFIQGRGMARQRTFSYGVGRIGRLQASSKGAYPPPSRRLRGRGLCMDASSCAPEITDDSFEAEVLDEDRPVLVFFRAPWCGPCRMVGPIVDEVIADHGSKLKVLELCTDENPKTVAEFKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHMDL 191          
BLAST of mRNA_E-fasciculatus_F_contig14.2930.1 vs. uniprot
Match: D7G7W3_ECTSI (Thioredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7W3_ECTSI)

HSP 1 Score: 224 bits (571), Expect = 7.270e-73
Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 0
Query:   82 MDARSCAPEITDDSFEAEVLNEDRPVLVFFRAPWCGPCRMVGPIVDEVIAEHGGKLKVLELCTDENPKTVAEFKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHMDL 193
            MDARSCAPEITDDSFEAEVL+EDRPVLVFFRA WCGPCRMVGPIVDEVIA+HGGKLKVLELCTDENPKTVAEFKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHMDL
Sbjct:    1 MDARSCAPEITDDSFEAEVLDEDRPVLVFFRAAWCGPCRMVGPIVDEVIADHGGKLKVLELCTDENPKTVAEFKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHMDL 112          
BLAST of mRNA_E-fasciculatus_F_contig14.2930.1 vs. uniprot
Match: A0A524RKQ5_9CYAN (Thioredoxin n=2 Tax=Aphanocapsa feldmannii TaxID=192050 RepID=A0A524RKQ5_9CYAN)

HSP 1 Score: 135 bits (339), Expect = 1.100e-37
Identity = 64/106 (60.38%), Postives = 80/106 (75.47%), Query Frame = 0
Query:   86 SCAPEITDDSFEAEVLNEDRPVLVFFRAPWCGPCRMVGPIVDEVIAEHGGKLKVLELCTDENPKTVAEFKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHM 191
            S A  +TDDSFE EVL  D PVL+ F APWCGPCRMV PIVDE+ +E  G++KV++L TDENP   +++ IR+IPTLMLF   + V TVVGAVPK+ L S+I KH+
Sbjct:    2 SSAAAVTDDSFEVEVLKSDIPVLIDFWAPWCGPCRMVAPIVDEIASEFAGRIKVVKLNTDENPNVASQYGIRSIPTLMLFKAGQRVDTVVGAVPKNTLSSTITKHL 107          
BLAST of mRNA_E-fasciculatus_F_contig14.2930.1 vs. uniprot
Match: A0A1L5YCU0_9EUKA (Thioredoxin n=2 Tax=Paulinella TaxID=39716 RepID=A0A1L5YCU0_9EUKA)

HSP 1 Score: 134 bits (336), Expect = 3.220e-37
Identity = 63/107 (58.88%), Postives = 80/107 (74.77%), Query Frame = 0
Query:   86 SCAPEITDDSFEAEVLNEDRPVLVFFRAPWCGPCRMVGPIVDEVIAEHGGKLKVLELCTDENPKTVAEFKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHMD 192
            S A ++TD SFE E+L  D PVLV F APWCGPCRM+ PIVDE+  E  GKL+V +L TDENP   +++ IR+IPTLM+FSD + V TVVGAVPK+ L  +I+KH+ 
Sbjct:    2 SSAADVTDASFETEILKSDVPVLVDFWAPWCGPCRMLAPIVDEIAKEFAGKLRVFKLNTDENPSIASQYGIRSIPTLMIFSDGQKVDTVVGAVPKATLSVTIEKHIS 108          
BLAST of mRNA_E-fasciculatus_F_contig14.2930.1 vs. uniprot
Match: A0A1G4NTQ2_9FLOR (Thioredoxin n=13 Tax=Nemaliales TaxID=2807 RepID=A0A1G4NTQ2_9FLOR)

HSP 1 Score: 131 bits (330), Expect = 2.770e-36
Identity = 59/103 (57.28%), Postives = 77/103 (74.76%), Query Frame = 0
Query:   90 EITDDSFEAEVLNEDRPVLVFFRAPWCGPCRMVGPIVDEVIAEHGGKLKVLELCTDENPKTVAEFKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHMD 192
            ++ D +F  EVLN D+PVLV F APWCGPCRMV P+VDE+  E+   +KV++L TDENP T  E+ IR+IPTLM+F D   V TV+GAVPKS L S++ K++D
Sbjct:    5 QVMDSTFNEEVLNHDQPVLVDFWAPWCGPCRMVAPVVDEIAHEYSESIKVVKLNTDENPSTATEYGIRSIPTLMIFKDGGRVDTVIGAVPKSTLASTLNKYLD 107          
BLAST of mRNA_E-fasciculatus_F_contig14.2930.1 vs. uniprot
Match: B1X5G8_PAUCH (Thioredoxin n=1 Tax=Paulinella chromatophora TaxID=39717 RepID=B1X5G8_PAUCH)

HSP 1 Score: 131 bits (330), Expect = 2.850e-36
Identity = 63/110 (57.27%), Postives = 82/110 (74.55%), Query Frame = 0
Query:   82 MDARSCAPEITDDSFEAEVLNEDRPVLVFFRAPWCGPCRMVGPIVDEVIAEHGGKLKVLELCTDENPKTVAEFKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHM 191
            M+  S A ++TD SFE E+L  + PVLV F APWCGPCRM+ PIVDE+  E  GKLKV +L TDENP   +++ IR+IPTLM+F++ + V TVVGAVPKS L  +I+KH+
Sbjct:    1 MEKMSSAADVTDASFETEILMSNIPVLVDFWAPWCGPCRMLAPIVDEIAKEFEGKLKVFKLNTDENPTIASQYGIRSIPTLMIFNEGQKVDTVVGAVPKSTLSVTIEKHV 110          
BLAST of mRNA_E-fasciculatus_F_contig14.2930.1 vs. uniprot
Match: A0A4D6BL56_9FLOR (Thioredoxin n=1 Tax=Balbiania investiens TaxID=111861 RepID=A0A4D6BL56_9FLOR)

HSP 1 Score: 131 bits (330), Expect = 3.120e-36
Identity = 58/103 (56.31%), Postives = 77/103 (74.76%), Query Frame = 0
Query:   90 EITDDSFEAEVLNEDRPVLVFFRAPWCGPCRMVGPIVDEVIAEHGGKLKVLELCTDENPKTVAEFKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHMD 192
            ++ D +F+ EVLN   PVLV F APWCGPCRMV P+VDE+  E+ G +KV+ + TDENP T  E+ IR+IPTLM+F D K V TV+GAVPKS L +++ K++D
Sbjct:    5 QVIDSTFQEEVLNHKLPVLVDFWAPWCGPCRMVAPVVDEIANEYNGSIKVVTINTDENPSTATEYGIRSIPTLMIFKDGKRVDTVIGAVPKSTLATALNKYLD 107          
BLAST of mRNA_E-fasciculatus_F_contig14.2930.1 vs. uniprot
Match: K9SGU7_9CYAN (Thioredoxin n=2 Tax=unclassified Pseudanabaena TaxID=2593292 RepID=K9SGU7_9CYAN)

HSP 1 Score: 131 bits (329), Expect = 3.810e-36
Identity = 62/107 (57.94%), Postives = 80/107 (74.77%), Query Frame = 0
Query:   86 SCAPEITDDSFEAEVLNEDRPVLVFFRAPWCGPCRMVGPIVDEVIAEHGGKLKVLELCTDENPKTVAEFKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHMD 192
            S A  +TD SFE +VL  D PVLV F APWCGPCRMV P+VDEV  ++ GK+KV++L TDENP   +++ IR+IPTLMLF   + V  VVGAVPK+ L ++I+KH+D
Sbjct:    2 SSAIAVTDASFETDVLASDVPVLVDFWAPWCGPCRMVAPVVDEVAEQYDGKIKVVKLNTDENPNVASQYGIRSIPTLMLFKGGQRVDVVVGAVPKTTLANTIEKHLD 108          
BLAST of mRNA_E-fasciculatus_F_contig14.2930.1 vs. uniprot
Match: A0A1D8TLH5_9CYAN (Thioredoxin n=1 Tax=Moorena producens PAL-8-15-08-1 TaxID=1458985 RepID=A0A1D8TLH5_9CYAN)

HSP 1 Score: 130 bits (326), Expect = 1.020e-35
Identity = 60/106 (56.60%), Postives = 80/106 (75.47%), Query Frame = 0
Query:   86 SCAPEITDDSFEAEVLNEDRPVLVFFRAPWCGPCRMVGPIVDEVIAEHGGKLKVLELCTDENPKTVAEFKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHM 191
            S A  +TD SF+AEVL  D PVLV F APWCGPCRMV P+V+E+  ++G K+KV++L TDENPK   E+ IR+IPTLM+F   + V  VVGAVPK+ L ++++KH+
Sbjct:    2 SNAAPVTDSSFQAEVLESDIPVLVDFWAPWCGPCRMVAPVVEEIAQQYGDKVKVVKLNTDENPKVAGEYGIRSIPTLMIFKGGQRVDMVVGAVPKTTLANTLEKHL 107          
BLAST of mRNA_E-fasciculatus_F_contig14.2930.1 vs. uniprot
Match: A0A3S1BWD7_ANAVA (Thioredoxin n=1 Tax=Trichormus variabilis SAG 1403-4b TaxID=447716 RepID=A0A3S1BWD7_ANAVA)

HSP 1 Score: 130 bits (326), Expect = 1.020e-35
Identity = 57/106 (53.77%), Postives = 83/106 (78.30%), Query Frame = 0
Query:   86 SCAPEITDDSFEAEVLNEDRPVLVFFRAPWCGPCRMVGPIVDEVIAEHGGKLKVLELCTDENPKTVAEFKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHM 191
            S A ++TD SF+ EV+N D PVLV F APWCGPCRMV P+VDE+ +++ G+LKV+++ TDENP+   ++ IR+IPTLM+F D + V  VVGAVPK+ L ++++K++
Sbjct:    2 SAATQVTDSSFDQEVINSDVPVLVDFWAPWCGPCRMVAPVVDEIASQYEGQLKVVKVNTDENPQVAGKYGIRSIPTLMIFKDGQKVDMVVGAVPKTTLATTLEKYL 107          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14.2930.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L318_9PHAE7.120e-12593.33Thioredoxin domain-containing protein n=1 Tax=Ecto... [more]
D7G7W3_ECTSI7.270e-7397.32Thioredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A524RKQ5_9CYAN1.100e-3760.38Thioredoxin n=2 Tax=Aphanocapsa feldmannii TaxID=1... [more]
A0A1L5YCU0_9EUKA3.220e-3758.88Thioredoxin n=2 Tax=Paulinella TaxID=39716 RepID=A... [more]
A0A1G4NTQ2_9FLOR2.770e-3657.28Thioredoxin n=13 Tax=Nemaliales TaxID=2807 RepID=A... [more]
B1X5G8_PAUCH2.850e-3657.27Thioredoxin n=1 Tax=Paulinella chromatophora TaxID... [more]
A0A4D6BL56_9FLOR3.120e-3656.31Thioredoxin n=1 Tax=Balbiania investiens TaxID=111... [more]
K9SGU7_9CYAN3.810e-3657.94Thioredoxin n=2 Tax=unclassified Pseudanabaena Tax... [more]
A0A1D8TLH5_9CYAN1.020e-3556.60Thioredoxin n=1 Tax=Moorena producens PAL-8-15-08-... [more]
A0A3S1BWD7_ANAVA1.020e-3553.77Thioredoxin n=1 Tax=Trichormus variabilis SAG 1403... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00421THIOREDOXINcoord: 155..166
score: 36.02
coord: 115..124
score: 59.22
coord: 107..115
score: 58.83
NoneNo IPR availableGENE3D3.40.30.10coord: 89..192
e-value: 6.9E-29
score: 102.0
NoneNo IPR availablePANTHERPTHR45663FAMILY NOT NAMEDcoord: 86..192
NoneNo IPR availablePANTHERPTHR45663:SF1coord: 86..192
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 29..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..193
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32
NoneNo IPR availableTMHMMTMhelixcoord: 20..39
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 90..189
e-value: 3.1E-24
score: 84.9
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 82..192
score: 11.522
IPR005746ThioredoxinTIGRFAMTIGR01068TIGR01068coord: 92..190
e-value: 1.5E-28
score: 96.9
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 88..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14contigE-fasciculatus_F_contig14:26436..28363 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14.2930.1mRNA_E-fasciculatus_F_contig14.2930.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14 26313..28518 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14.2930.1 ID=prot_E-fasciculatus_F_contig14.2930.1|Name=mRNA_E-fasciculatus_F_contig14.2930.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=194bp
MVALSWGCRLIAGRTEACSVSVLSLLLLLACAVPGVSFIQGRGIVRQRTF
SYGVGRIGRLQASSKGAYPPPSRRLRGRGLCMDARSCAPEITDDSFEAEV
LNEDRPVLVFFRAPWCGPCRMVGPIVDEVIAEHGGKLKVLELCTDENPKT
VAEFKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHMDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR005746Thioredoxin
IPR013766Thioredoxin_domain