prot_E-fasciculatus_F_contig13991.2923.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13991.2923.1
Unique Nameprot_E-fasciculatus_F_contig13991.2923.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length163
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13991.2923.1 vs. uniprot
Match: D7FTW8_ECTSI (Calpain catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW8_ECTSI)

HSP 1 Score: 218 bits (555), Expect = 1.920e-65
Identity = 125/159 (78.62%), Postives = 131/159 (82.39%), Query Frame = 0 
Query:    1 MEELFAAATGCLDPLVASSYLESAGYDLTRAVNHFLDSPKNDAAVSRGHGDNCGSASCGGDDNGGNRSFTRQRAALAGEKQQQQQLLTFEHARPSLSGTSSSSVTASLGMPSSSGMSEETHAKRCDSILGAPVPKTTAAIVAATTPSAGWEAIAERCQR 159
            MEELFAAATGCL+PLVA+SYLE AGYDLTRAVNHFLDSPKND A SR H D C SASCG DDN   RS  RQRAA+AGEKQQQQ LL FEHARP LS TSSSSVTAS+GMP SSGM+EE HAK CDSI GAPVPK+T      T PSAGWEAIAERCQR
Sbjct:    1 MEELFAAATGCLNPLVAASYLERAGYDLTRAVNHFLDSPKNDTAASRSHSDYCKSASCG-DDNSDPRSLKRQRAAMAGEKQQQQ-LLKFEHARPLLSDTSSSSVTASVGMPFSSGMAEEIHAKPCDSIRGAPVPKST------TAPSAGWEAIAERCQR 151
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BLAST of mRNA_E-fasciculatus_F_contig13991.2923.1 vs. uniprot
Match: A0A6H5JEW6_9PHAE (GRF-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEW6_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 1.440e-46
Identity = 99/159 (62.26%), Postives = 104/159 (65.41%), Query Frame = 0 
Query:    1 MEELFAAATGCLDPLVASSYLESAGYDLTRAVNHFLDSPKNDAAVSRGHGDNCGSASCGGDDNGGNRSFTRQRAALAGEKQQQQQLLTFEHARPSLSGTSSSSVTASLGMPSSSGMSEETHAKRCDSILGAPVPKTTAAIVAATTPSAGWEAIAERCQR 159
            MEELFAAATGCLDPLVA+SYLE AGYDLTRAVNHFLDSPKN  A SRG  D C  +                              L FEHAR  LS TSSSSV AS+GMPSSSGM+EE HA  CDS+LGAPVPKTT      T PSAGWEA AERCQR
Sbjct:    1 MEELFAAATGCLDPLVAASYLERAGYDLTRAVNHFLDSPKNGTAASRGSSDYCCRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKFEHARRLLSDTSSSSVPASVGMPSSSGMAEEIHAMPCDSVLGAPVPKTT------TAPSAGWEAFAERCQR 153
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13991.2923.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTW8_ECTSI1.920e-6578.62Calpain catalytic domain-containing protein n=1 Ta... [more]
A0A6H5JEW6_9PHAE1.440e-4662.26GRF-type domain-containing protein n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14555UBA_4coord: 5..39
e-value: 2.6E-7
score: 30.3
NoneNo IPR availableGENE3D1.10.8.10coord: 3..43
e-value: 3.8E-6
score: 28.4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..162
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13991contigE-fasciculatus_F_contig13991:1483..1971 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13991.2923.1mRNA_E-fasciculatus_F_contig13991.2923.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13991 1461..1971 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13991.2923.1 ID=prot_E-fasciculatus_F_contig13991.2923.1|Name=mRNA_E-fasciculatus_F_contig13991.2923.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=163bp
MEELFAAATGCLDPLVASSYLESAGYDLTRAVNHFLDSPKNDAAVSRGHG
DNCGSASCGGDDNGGNRSFTRQRAALAGEKQQQQQLLTFEHARPSLSGTS
SSSVTASLGMPSSSGMSEETHAKRCDSILGAPVPKTTAAIVAATTPSAGW
EAIAERCQRWEP*
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