prot_E-fasciculatus_F_contig13983.2916.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13983.2916.1
Unique Nameprot_E-fasciculatus_F_contig13983.2916.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length159
Homology
BLAST of mRNA_E-fasciculatus_F_contig13983.2916.1 vs. uniprot
Match: A0A6H5K9I9_9PHAE (MEP6 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9I9_9PHAE)

HSP 1 Score: 317 bits (812), Expect = 1.100e-104
Identity = 147/158 (93.04%), Postives = 156/158 (98.73%), Query Frame = 0
Query:    1 YWLLTSDVYIYDGVKLELHAESGTTGVRLQSDSKVIELRAYGGWLSLLNTELSSWDLDEADYATNYSAPRSYVTAISEVLDNPPQTCIGHAKNDAGEARFDIINSEVHHLGYHGTEAYGITWKVRGFCVDLSNGDLFDRVNVRGDIRFSDIHHNYFGM 158
            YWL TSDVYIYDGVKLELHAESGTTG+RL+SDSKVIELRA+GGWLSLLNTELSSWD+DEADYA+NYSAPRSYVTAISEVLD+PPQTC+GHAKNDAGEARFDIINSEVHHLG++GTEAYGITWKVRGFCVDLSN DLFDRVNVRGDIRFSDIHHNYFGM
Sbjct:  103 YWLFTSDVYIYDGVKLELHAESGTTGMRLKSDSKVIELRAHGGWLSLLNTELSSWDVDEADYASNYSAPRSYVTAISEVLDSPPQTCVGHAKNDAGEARFDIINSEVHHLGHYGTEAYGITWKVRGFCVDLSNEDLFDRVNVRGDIRFSDIHHNYFGM 260          
BLAST of mRNA_E-fasciculatus_F_contig13983.2916.1 vs. uniprot
Match: D8LKL1_ECTSI (Mannuronan C-5 epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKL1_ECTSI)

HSP 1 Score: 261 bits (666), Expect = 5.090e-84
Identity = 127/163 (77.91%), Postives = 138/163 (84.66%), Query Frame = 0
Query:    1 YWLLTSDVYIYDGVKLELHAESGTTGVRLQSDSKVIELRAYGGWLSLLNTELSSWDLDEADYATNYSAPRSYVTAISEVLDNPPQTCIGHAKNDAGEARFDI-----INSEVHHLGYHGTEAYGITWKVRGFCVDLSNGDLFDRVNVRGDIRFSDIHHNYFGM 158
            YWL TSDVYIYDGVKLELHAESGTTG+RL+SDSKVIELRA+GGWLSLLNTELSSWD+DEADYA+NYSAPRSYVTAISEVL+ PPQTC+GHAKNDAGEARFD            H  +   + Y    +VRGFCVDLSN DLFDRVNVRG+IRFSDIHHNYFGM
Sbjct:   27 YWLFTSDVYIYDGVKLELHAESGTTGMRLKSDSKVIELRAHGGWLSLLNTELSSWDVDEADYASNYSAPRSYVTAISEVLETPPQTCVGHAKNDAGEARFDSDVEPRAAPSAQHTRFFSLQTYA-RQQVRGFCVDLSNEDLFDRVNVRGNIRFSDIHHNYFGM 188          
BLAST of mRNA_E-fasciculatus_F_contig13983.2916.1 vs. uniprot
Match: D7G1G1_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G1_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 1.760e-48
Identity = 84/161 (52.17%), Postives = 115/161 (71.43%), Query Frame = 0
Query:    2 WLLTSDVYIYDGVKLELHAESGTTGVRLQSDS-KVIELRAYGGWLSLLNTELSSWDLDEADY---ATNYSAPRSYVTAISEVLDNPPQTCIGHAKNDAGEARFDIINSEVHHLGYHGTEAYGITWKVRGFCVDLSNGDLFDRVNVRGDIRFSDIHHNYFGM 158
            WLLT  +Y+  G  L LH + G T +R+ S S   + L  +GG++S+LNT+++SW +   +    A + S PRSY++A+SE + +P  TC G A +DAGEAR DIINS+V +LGY   E+YG+T+KVRG+C D SN ++FDRVNVRGDIRFSDIHHN+FG 
Sbjct:   97 WLLTKHLYMRPGTTLLLHDDLGCTELRIASSSTNALHLNTFGGYISILNTKVTSWSVSNKEPDAGAYDGSNPRSYMSAVSE-MTHPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQ 256          
BLAST of mRNA_E-fasciculatus_F_contig13983.2916.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 171 bits (432), Expect = 4.080e-48
Identity = 86/161 (53.42%), Postives = 111/161 (68.94%), Query Frame = 0
Query:    2 WLLTSDVYIYDGVKLELHAESG---TTGVRLQSDSKV-IELRAYGGWLSLLNTELSSWDLDEADYATNYSAPRSYVTAISEVLDNPPQTCIGHAKNDAGEARFDIINSEVHHLGYHGTEAYGITWKVRGFCVDLSNGDLFDRVNVRGDIRFSDIHHNYFGM 158
            WLLT ++Y+ DG+ L++H  S       +RL S S   I LRAYGG L  L+T++ +WD  +     + S  RSY++A+SEV+ +  QTC G AKN+ GEAR DI NSE+ +LGYHGTE YG+TWKVRGFCVD  N +LFD VNV G+I  SDIHHN FG+
Sbjct:   74 WLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGV 234          
BLAST of mRNA_E-fasciculatus_F_contig13983.2916.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA)

HSP 1 Score: 164 bits (415), Expect = 2.020e-45
Identity = 81/161 (50.31%), Postives = 112/161 (69.57%), Query Frame = 0
Query:    2 WLLTSDVYIYDGVKLELHAESG---TTGVRLQSDSK-VIELRAYGGWLSLLNTELSSWDLDEADYATNYSAPRSYVTAISEVLDNPPQTCIGHAKNDAGEARFDIINSEVHHLGYHGTEAYGITWKVRGFCVDLSNGDLFDRVNVRGDIRFSDIHHNYFGM 158
            WLLT  +Y+ DG+ L++H +S       +RL S SK  I LRA+GG L  ++T++ +WD  +    T+ S  RSY++A+SEV+ +  Q C G AK + GEAR DI +SE+ +LGY G+E+YG+TWKVRG C DLSN ++FD VNV G+I  SDIHHNYFG+
Sbjct:  100 WLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGV 260          
BLAST of mRNA_E-fasciculatus_F_contig13983.2916.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 2.020e-45
Identity = 83/161 (51.55%), Postives = 111/161 (68.94%), Query Frame = 0
Query:    2 WLLTSDVYIYDGVKLELHAESG---TTGVRLQSDSKV-IELRAYGGWLSLLNTELSSWDLDEADYATNYSAPRSYVTAISEVLDNPPQTCIGHAKNDAGEARFDIINSEVHHLGYHGTEAYGITWKVRGFCVDLSNGDLFDRVNVRGDIRFSDIHHNYFGM 158
            WLLT ++++ DG+ L++H  S       +RL S S   I LRA+GG L  L+T++ +WD        +    RSYV+A+SEV+ +  QTC G AKN+ GEAR DI +SE+ +LGYHG+E+YG+TWKVRGFCVD SN DLF+ VNV G+I  SDIHHN FG+
Sbjct:  100 WLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGV 260          
BLAST of mRNA_E-fasciculatus_F_contig13983.2916.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 5.810e-45
Identity = 79/161 (49.07%), Postives = 111/161 (68.94%), Query Frame = 0
Query:    2 WLLTSDVYIYDGVKLELHAESG---TTGVRLQSDSK-VIELRAYGGWLSLLNTELSSWDLDEADYATNYSAPRSYVTAISEVLDNPPQTCIGHAKNDAGEARFDIINSEVHHLGYHGTEAYGITWKVRGFCVDLSNGDLFDRVNVRGDIRFSDIHHNYFGM 158
            WLLT D+Y+ DG+ L++H  S       +RL S SK  I LRA+GG L  ++T++ +WD  +    T+ S  RSY++A+SE++ +  + C G AK   GEAR DI +SE+ +LGY G+E+YG+TWKVRGFC D SN ++FD VNV G+I  SDIHHN+FG+
Sbjct:  103 WLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGV 263          
BLAST of mRNA_E-fasciculatus_F_contig13983.2916.1 vs. uniprot
Match: D7FMJ0_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMJ0_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 5.060e-44
Identity = 81/160 (50.62%), Postives = 111/160 (69.38%), Query Frame = 0
Query:    2 WLLTSDVYIYDGVKLELHAES---GTTGVRLQSDSKV-IELRAYGGWLSLLNTELSSWDLDEADYATNYSAPRSYVTAISEVLDNPPQTCIGHAKNDAGEARFDIINSEVHHLGYHGTEAYGITWKVRGFCVDLSNGDLFDRVNVRGDIRFSDIHHNYFG 157
            WLLT ++Y+ DGV L++H          +RL SD    I LRA+GG  S L T++ SW+  +    TN+   RSY++A+SEV+ +P QTC G AK++ GEAR D+I+SE+  LGY+ +E+YG+TWKVRGFC+D SN D+FD VNV GD+  S+IH NYFG
Sbjct:  411 WLLTEELYVTDGVILQVHGTDRGGDCDELRLLSDETTFINLRAHGGSFSFLGTKVVSWNEGKGTVDTNHEDGRSYISAVSEVIYDPNQTCNGTAKSEMGEARMDVIDSEIAFLGYYESESYGLTWKVRGFCIDKSNLDVFDFVNVYGDMINSNIHDNYFG 570          
BLAST of mRNA_E-fasciculatus_F_contig13983.2916.1 vs. uniprot
Match: A0A6H5KSU6_9PHAE (MEP3 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSU6_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 1.710e-43
Identity = 79/157 (50.32%), Postives = 110/157 (70.06%), Query Frame = 0
Query:    2 WLLTSDVYIYDGVKLELHAES---GTTGVRLQS-DSKVIELRAYGGWLSLLNTELSSWDLDEADYATNYSAPRSYVTAISEVLDNPPQTCIGHAKNDAGEARFDIINSEVHHLGYHGTEAYGITWKVRGFCVDLSNGDLFDRVNVRGDIRFSDIHHN 154
            WLLT ++Y+ DGV L++H          +RL S ++  I LRA+GG  S L T++ SW+  +    TN+   RSY++A+SEV+ +P QTC G AK++ GEAR D+I+SE+  LGY+ +E+YG+TWKVRGFCVD SN D+FD VNV GD+  S+IHHN
Sbjct:  237 WLLTEELYVTDGVILQVHGTDRGGDCDELRLLSNETTFINLRAHGGSFSFLGTKVVSWNEGKRTVDTNHEDGRSYISAVSEVIYDPNQTCNGTAKSEMGEARMDVIDSEIAFLGYYESESYGLTWKVRGFCVDKSNPDVFDFVNVYGDMINSNIHHN 393          
BLAST of mRNA_E-fasciculatus_F_contig13983.2916.1 vs. uniprot
Match: D7FZF8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF8_ECTSI)

HSP 1 Score: 157 bits (397), Expect = 1.980e-42
Identity = 84/160 (52.50%), Postives = 107/160 (66.88%), Query Frame = 0
Query:    2 WLLTSDVYIYDGVKLELH--AESGTTGVRLQSDS--KVIELRAYGGWLSLLNTELSSWDLDEADYATNYSAPRSYVTAISEVLDNPPQTCIGHAKNDAGEARFDIINSEVHHLGYHGTEAYGITWKVRGFCVDLSNGDLFDRVNVRGDIRFSDIHHNYFG 157
            W L S +YI +G +L +   ++ G     L + S  K I LRA+GG L L  T + SWDL       N    RSY++AISEV+ +P +TC G AKND GEAR DII+SEV+HLG++ +E+YGI +KVRGFC DLSN +LFD V+V GDI  SDIH NYFG
Sbjct:  119 WYLESTLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINLRAHGGELMLDGTHVESWDLAAGTVDENNEDGRSYLSAISEVITDPAETCDGTAKNDMGEARMDIIDSEVNHLGWYDSESYGIAYKVRGFCKDLSNPELFDSVSVTGDILGSDIHDNYFG 278          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13983.2916.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9I9_9PHAE1.100e-10493.04MEP6 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LKL1_ECTSI5.090e-8477.91Mannuronan C-5 epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G1G1_ECTSI1.760e-4852.17Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
Q7XAJ8_9PHAE4.080e-4853.42Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
A8CEP1_SACJA2.020e-4550.31Mannuronan C-5 epimerase n=1 Tax=Saccharina japoni... [more]
Q7XAJ7_9PHAE2.020e-4551.55Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]
Q7XAK2_9PHAE5.810e-4549.07Mannuronan C-5-epimerase n=2 Tax=Laminaria digitat... [more]
D7FMJ0_ECTSI5.060e-4450.63Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KSU6_9PHAE1.710e-4350.32MEP3 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FZF8_ECTSI1.980e-4252.50Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..158
e-value: 2.7E-32
score: 114.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13983contigE-fasciculatus_F_contig13983:110..3069 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13983.2916.1mRNA_E-fasciculatus_F_contig13983.2916.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13983 110..3069 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13983.2916.1 ID=prot_E-fasciculatus_F_contig13983.2916.1|Name=mRNA_E-fasciculatus_F_contig13983.2916.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=159bp
YWLLTSDVYIYDGVKLELHAESGTTGVRLQSDSKVIELRAYGGWLSLLNT
ELSSWDLDEADYATNYSAPRSYVTAISEVLDNPPQTCIGHAKNDAGEARF
DIINSEVHHLGYHGTEAYGITWKVRGFCVDLSNGDLFDRVNVRGDIRFSD
IHHNYFGM*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold