prot_E-fasciculatus_F_contig1398.2915.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1398.2915.1
Unique Nameprot_E-fasciculatus_F_contig1398.2915.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length118
Homology
BLAST of mRNA_E-fasciculatus_F_contig1398.2915.1 vs. uniprot
Match: A0A6H5JJ24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ24_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 1.580e-15
Identity = 46/111 (41.44%), Postives = 67/111 (60.36%), Query Frame = 0
Query:    8 PRFSVASKLVKSAIVWCVCWWCCNAEAATS--GNPTVSSRLPLSEPATGGAGAPEGWTALTMLLNGGAQSQTVMIRDDADEAEFSATIAEGCREAGVGDEHALYITTQWKL 116
            P    ASK + +  V+ +  W  N  + +S  G  T ++  P+S PA   + A EGWT  T++L+GG + QTVM+R+DADE E  A+IAEG REAG+ +     +T +WKL
Sbjct:    3 PSLPAASKFIIA--VFLMGTWHGNVSSTSSVEGGVTEATLSPVSAPARNESIASEGWT--TLILDGGTKRQTVMVRNDADETEVVASIAEGGREAGMTEPQITEVTAKWKL 109          
BLAST of mRNA_E-fasciculatus_F_contig1398.2915.1 vs. uniprot
Match: D7FK28_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK28_ECTSI)

HSP 1 Score: 76.3 bits (186), Expect = 8.470e-14
Identity = 46/110 (41.82%), Postives = 65/110 (59.09%), Query Frame = 0
Query:    8 PRFSVASKLVKSAIVWCVCWWCCNAEAAT-SGNPTVSSRLPLSEPATGGAGAPEGWTALTMLLNGGAQSQTVMIRDDADEAEFSATIAEGCREAGVGDEHALYITTQWKL 116
            P    ASK   + ++  V  W  N  + +  G  T ++  P+S PA   A A EGWT  T++L+GG + QTVM+R+DADE E  A+IAEG REAG+ +     +T +WKL
Sbjct:    3 PSLPAASKFTLAVLL--VGTWHGNVSSTSVEGGVTEATLSPVSAPARNEAIASEGWT--TLILDGGTKRQTVMVRNDADETEVFASIAEGGREAGMTEPQIADVTAKWKL 108          
BLAST of mRNA_E-fasciculatus_F_contig1398.2915.1 vs. uniprot
Match: D7FK29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK29_ECTSI)

HSP 1 Score: 59.7 bits (143), Expect = 3.840e-8
Identity = 30/52 (57.69%), Postives = 35/52 (67.31%), Query Frame = 0
Query:   67 MLLNGGAQSQTVMIRDDADEAEFSATIAEGCREAGVGDEHALYITTQWKLGK 118
            M+L  G QSQ    R    + + SA IAEGCREAGV DEHA+ ITTQWK+ K
Sbjct:    1 MVLKEGVQSQMTRTR----QRQCSAVIAEGCREAGVSDEHAISITTQWKMEK 48          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1398.2915.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JJ24_9PHAE1.580e-1541.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FK28_ECTSI8.470e-1441.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FK29_ECTSI3.840e-857.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 19..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..118
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 31..34
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..32
score: 0.542

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1398contigE-fasciculatus_F_contig1398:11228..13074 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1398.2915.1mRNA_E-fasciculatus_F_contig1398.2915.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1398 11228..13361 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1398.2915.1 ID=prot_E-fasciculatus_F_contig1398.2915.1|Name=mRNA_E-fasciculatus_F_contig1398.2915.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=118bp
MASIFRSPRFSVASKLVKSAIVWCVCWWCCNAEAATSGNPTVSSRLPLSE
PATGGAGAPEGWTALTMLLNGGAQSQTVMIRDDADEAEFSATIAEGCREA
GVGDEHALYITTQWKLGK
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