prot_E-fasciculatus_F_contig13979.2912.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13979.2912.1
Unique Nameprot_E-fasciculatus_F_contig13979.2912.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length327
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13979.2912.1 vs. uniprot
Match: A0A6H5JU77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU77_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 1.320e-10
Identity = 64/123 (52.03%), Postives = 68/123 (55.28%), Query Frame = 0 
Query:   69 RTTATSPPQPRPVAEPPRGSPES-PRPXX-----PAFGSPSPHAAADDADGDSSDSTRIATRLAIAHNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGVESCPPAL-PAVATADIDNDTA 184
            RT  +SPPQPRPVA+ PRGSPES P P X     PAFGSPS  A + D    S+ STRIATRLAIAHNN                             GVGVES PPAL PAVA A  DND A
Sbjct:   72 RTATSSPPQPRPVADLPRGSPESSPAPPXXXXXXPAFGSPSHRADSSD----SAMSTRIATRLAIAHNNAAARRRHARLLDARSMRRSITASLRP---GVGVESHPPALLPAVAIATADNDAA 187
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13979.2912.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JU77_9PHAE1.320e-1052.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13979contigE-fasciculatus_F_contig13979:2070..3118 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13979.2912.1mRNA_E-fasciculatus_F_contig13979.2912.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13979 1286..3398 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13979.2912.1 ID=prot_E-fasciculatus_F_contig13979.2912.1|Name=mRNA_E-fasciculatus_F_contig13979.2912.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=327bp
MPVRQREPSPASSPACRPEEEAPLAASEGGGGTIEMEEPRTPVGSGGGDE
QLAVANATAAAAALLAVDRTTATSPPQPRPVAEPPRGSPESPRPPPPAFG
SPSPHAAADDADGDSSDSTRIATRLAIAHNNAAAARRRHARLLDARSMRR
RSTTALLPPPGVGVESCPPALPAVATADIDNDTAAAAAAGGAAGSGGSSA
FAAASDGWSRRVGEARAAAAAAGVGGGGMMAESSITDEDDDIIGSDTSGT
VDSSAVHATTRSGAAEHNNTATTCCCCCCCYCASVWWCPQEAKPHQHYRQ
PYRRCSDCWCCPSVYPQEARLSCHYY*
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