prot_E-fasciculatus_F_contig13954.2898.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13954.2898.1
Unique Nameprot_E-fasciculatus_F_contig13954.2898.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length131
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13954.2898.1 vs. uniprot
Match: A0A6H5KGY7_9PHAE (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGY7_9PHAE)

HSP 1 Score: 250 bits (639), Expect = 1.340e-82
Identity = 125/131 (95.42%), Postives = 131/131 (100.00%), Query Frame = 0 
Query:    1 MKPLAAVATSFVAMKLLFSHHRKRKGIKSLEEEKKRWVQMKKDDLKQINQQFNQMEASLTASLNEKVIQSKKLEQFLYSLPDTNQDGLITRFEFDKYMNEYKRAHPGLTDHDLPRFEDMDHNNNGHINFHE 131
            MKPLAAVATSFVAMKLLFSHHRKRKGIK+LE+E+K+WVQMKK+DL+QINQQFNQMEASLTASLNEKVIQSKKLEQFLYSLPDTNQDGLITRFEFDKYMNEYKRAHPGLTDHDLPRFEDMDHNNNGHINFHE
Sbjct:   87 MKPLAAVATSFVAMKLLFSHHRKRKGIKALEQERKKWVQMKKEDLQQINQQFNQMEASLTASLNEKVIQSKKLEQFLYSLPDTNQDGLITRFEFDKYMNEYKRAHPGLTDHDLPRFEDMDHNNNGHINFHE 217
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BLAST of mRNA_E-fasciculatus_F_contig13954.2898.1 vs. uniprot
Match: A0A7S2LGL3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LGL3_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 4.680e-7
Identity = 24/54 (44.44%), Postives = 37/54 (68.52%), Query Frame = 0 
Query:   78 YSLPDTNQDGLITRFEFDKYMNEYKRAHPGLTDHDLPRFEDMDHNNNGHINFHE 131
            +  PD + D  I+R EF+ Y+  Y   +PGLT+ D+P+FED DH+N+G ++F E
Sbjct:  150 FKQPDVDGDDRISRAEFNHYVKNYLSNYPGLTEKDMPKFEDFDHDNDGSVSFSE 203
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BLAST of mRNA_E-fasciculatus_F_contig13954.2898.1 vs. uniprot
Match: A0A482SNT9_9ARCH (EF-hand domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SNT9_9ARCH)

HSP 1 Score: 50.4 bits (119), Expect = 5.610e-5
Identity = 21/54 (38.89%), Postives = 36/54 (66.67%), Query Frame = 0 
Query:   78 YSLPDTNQDGLITRFEFDKYMNEYKRAHPGLTDHDLPRFEDMDHNNNGHINFHE 131
            +  PDTN D +I+R EF+ Y+ +Y  + P L++ D P+F+D D + +G ++F E
Sbjct:   63 FKAPDTNNDDMISRAEFNAYVTKYLSSFPELSEADFPKFDDFDQDEDGLVSFDE 116
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13954.2898.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KGY7_9PHAE1.340e-8295.42EF-hand domain-containing protein n=2 Tax=Ectocarp... [more]
A0A7S2LGL3_9STRA4.680e-744.44Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A482SNT9_9ARCH5.610e-538.89EF-hand domain-containing protein n=1 Tax=archaeon... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 38..65
NoneNo IPR availableGENE3D1.10.238.10coord: 4..131
e-value: 1.1E-9
score: 40.6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..131
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 82..94
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 71..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13954contigE-fasciculatus_F_contig13954:54..2882 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13954.2898.1mRNA_E-fasciculatus_F_contig13954.2898.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13954 30..2882 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13954.2898.1 ID=prot_E-fasciculatus_F_contig13954.2898.1|Name=mRNA_E-fasciculatus_F_contig13954.2898.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=131bp
MKPLAAVATSFVAMKLLFSHHRKRKGIKSLEEEKKRWVQMKKDDLKQINQ
QFNQMEASLTASLNEKVIQSKKLEQFLYSLPDTNQDGLITRFEFDKYMNE
YKRAHPGLTDHDLPRFEDMDHNNNGHINFHE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS