mRNA_E-fasciculatus_F_contig1395.2894.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1395.2894.1 vs. uniprot
Match: D7FUM2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUM2_ECTSI) HSP 1 Score: 137 bits (345), Expect = 3.110e-33 Identity = 196/198 (98.99%), Postives = 197/198 (99.49%), Query Frame = 2
Query: 1097 MGGGTGPYRNDSAFETVEVLRPGADTWVAGPSMCQARCGMGVTAMPDGKVFAVGGYGGDLVYRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEERFGAGDRGRAVTDASLVFQP 1690
MGGGTGPYRNDSAFETVEVLRPGADTWVAGPSMCQARCGMGVTA+PDGKVFAVGGYGGDLVYRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEERFGAGD GRAVTDASLVFQP
Sbjct: 1 MGGGTGPYRNDSAFETVEVLRPGADTWVAGPSMCQARCGMGVTALPDGKVFAVGGYGGDLVYRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEERFGAGDGGRAVTDASLVFQP 198
BLAST of mRNA_E-fasciculatus_F_contig1395.2894.1 vs. uniprot
Match: A0A6H5K7M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7M0_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 1.040e-20 Identity = 54/65 (83.08%), Postives = 56/65 (86.15%), Query Frame = 2
Query: 278 RDRRGDRVAGAARSLQRRREGCRADRGRDGAE---SLLPFPPEVMSLALLYAGGKTLSQAACVSK 463
RDRRGD +AGAARSL RRR+GCR GRDGAE SLLPFPPEVMSLALLYA GKTLSQAACVSK
Sbjct: 20 RDRRGDSIAGAARSLLRRRQGCRVVGGRDGAEAELSLLPFPPEVMSLALLYAEGKTLSQAACVSK 84 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1395.2894.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1395.2894.1 >prot_E-fasciculatus_F_contig1395.2894.1 ID=prot_E-fasciculatus_F_contig1395.2894.1|Name=mRNA_E-fasciculatus_F_contig1395.2894.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=496bp MTDSGGAAAAAAQQHQASSNNSSSRDRRGDRVAGAARSLQRRREGCRADRback to top mRNA from alignment at E-fasciculatus_F_contig1395:2970..13301+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1395.2894.1 ID=mRNA_E-fasciculatus_F_contig1395.2894.1|Name=mRNA_E-fasciculatus_F_contig1395.2894.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=10332bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1395:2970..13301+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1395:2970..13301+ >mRNA_E-fasciculatus_F_contig1395.2894.1 ID=mRNA_E-fasciculatus_F_contig1395.2894.1|Name=mRNA_E-fasciculatus_F_contig1395.2894.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2976bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1395:2970..13301+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |