mRNA_E-fasciculatus_F_contig13941.2889.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13941.2889.1
Unique NamemRNA_E-fasciculatus_F_contig13941.2889.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig13941.2889.1 vs. uniprot
Match: D7G0D7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0D7_ECTSI)

HSP 1 Score: 405 bits (1041), Expect = 1.890e-139
Identity = 200/207 (96.62%), Postives = 203/207 (98.07%), Query Frame = 1
Query:    1 VYERGNQNLKKFLENGWLVPDKTPCFYIYAQKMGEHLQTGIVAGVPVEDYALGVIKRHEKTQVKKENDRTRLTHVQNANAGPVFLTYRTNDTVDEIVARMTRETPEVQFRAEDGTEHSVWAVRDPVDVFAIQRAFEIVKTTYIADGHHRSASAFSRVGEMKIKEAVARGDVVTGEEPFNFFLAVLFPSNQLLCMEYNRVVRDLAGFS 621
            VYERGNQNLKKFLENGWLVPDKTPCFY+YAQKMGEHLQTGIVAGVPVEDYALGVIKRHEKTQVKKENDRTRLTHVQNANAGPVFLTYRT++TVDEIV RMTRE PEVQFRAEDGTEHSVWAVRDPVDVFAIQRAFE VKTTYIADGHHRSASAF RVGEMKIKEAVARGDVVTGEEPFNFFLAVLFPSNQLLCMEYNRVVRDLAGFS
Sbjct:   66 VYERGNQNLKKFLENGWLVPDKTPCFYVYAQKMGEHLQTGIVAGVPVEDYALGVIKRHEKTQVKKENDRTRLTHVQNANAGPVFLTYRTSETVDEIVGRMTRENPEVQFRAEDGTEHSVWAVRDPVDVFAIQRAFESVKTTYIADGHHRSASAF-RVGEMKIKEAVARGDVVTGEEPFNFFLAVLFPSNQLLCMEYNRVVRDLAGFS 271          
BLAST of mRNA_E-fasciculatus_F_contig13941.2889.1 vs. uniprot
Match: A0A836CBS0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBS0_9STRA)

HSP 1 Score: 285 bits (730), Expect = 1.830e-92
Identity = 140/205 (68.29%), Postives = 165/205 (80.49%), Query Frame = 1
Query:    1 VYERGNQNLKKFLENGWLVPDKTPCFYIYAQKMGEHLQTGIVAGVPVEDYALGVIKRHEKTQVKKENDRTRLTHVQNANAGPVFLTYRTNDTVDEIVARMTRETPEVQFRAEDGTEHSVWAVRDPVDVFAIQRAFEIVKTTYIADGHHRSASAFSRVGEMKIKEAVARGDVVTGEEPFNFFLAVLFPSNQLLCMEYNRVVRDLAG 615
            VYE+G +NL++F+  GWL  D TPC YIYAQ MG+H+Q GI AGVPVE+YA+G+IKRHEKTQVKKENDRTRLT+VQNAN GPVFLTYR N  V+ IV ++    PE +F A+DG  H VW VRDP  V  +QRAF  V  +YIADGHHRSASAF RVGEMKIKEA+ARGD++TGEEPF  FLAVLFP+++L  MEYNRVV+DL G
Sbjct:   66 VYEKGRENLQEFIGAGWLRRDATPCLYIYAQIMGDHVQHGICAGVPVEEYAMGLIKRHEKTQVKKENDRTRLTYVQNANVGPVFLTYRDNAAVNSIVNQVIASPPETEFVADDGIGHKVWPVRDPYMVRDLQRAFAAVPCSYIADGHHRSASAF-RVGEMKIKEAIARGDIITGEEPFTHFLAVLFPASELRIMEYNRVVKDLNG 269          
BLAST of mRNA_E-fasciculatus_F_contig13941.2889.1 vs. uniprot
Match: W7TNQ3_9STRA (Uncharacterized conserved protein UCP033563 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNQ3_9STRA)

HSP 1 Score: 256 bits (654), Expect = 1.010e-80
Identity = 130/209 (62.20%), Postives = 158/209 (75.60%), Query Frame = 1
Query:    1 VYERGNQNLKKFLENGWLVPDKTPCFYIYAQKMGEHLQTGIVAGVPVEDYALGVIKRHEKTQVKKENDRTRLTHVQNANAGPVFLTYRTNDTVDEIVARMTRETP-EVQFRAED-GTEHSVWAVRDPVDVFAIQRAFEIVKTTYIADGHHRSASAFSRVGEMKIKEAVARGDVVTGEEPFNFFLAVLFPSNQLLCMEYNRVVRDLAGFS 621
            VYERG +NLK+F+  GWL  +  P +YIY+Q+MG+H+Q GI     VE+YA GVIKRHEKTQVKKENDRTRLT+ QNAN GPVFL Y+ +D +DEIV  +T   P E  F A+D G EH VW V D   V +I+RAFE ++ +YIADGHHRSASAF RVGEMKIKEA+A G  VTG+E F  FLAVLFP+NQL  +EYNR+V+DL G +
Sbjct:   65 VYERGAKNLKEFISRGWLRKEAAPAYYIYSQRMGDHIQHGICGACSVEEYATGVIKRHEKTQVKKENDRTRLTYTQNANVGPVFLMYKPHDALDEIVRTVTSTRPAETSFVADDDGIEHLVWLVNDEPTVSSIRRAFESIRFSYIADGHHRSASAF-RVGEMKIKEAIAAGKNVTGDESFCLFLAVLFPANQLKILEYNRIVKDLNGLT 272          
BLAST of mRNA_E-fasciculatus_F_contig13941.2889.1 vs. uniprot
Match: A0A7X7UD90_9DELT (DUF1015 domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7X7UD90_9DELT)

HSP 1 Score: 208 bits (529), Expect = 2.590e-62
Identity = 102/207 (49.28%), Postives = 141/207 (68.12%), Query Frame = 1
Query:    1 VYERGNQNLKKFLENGWLVPDKTPCFYIYAQKMGEHLQTGIVAGVPVEDYALGVIKRHEKTQVKKENDRTRLTHVQNANAGPVFLTYRTNDTVDEIVARMTRETPEVQFRAEDGTEHSVWAVRDPVDVFAIQRAFEIVKTTYIADGHHRSASAFSRVGEMKIKEAVARGDVVTGEEPFNFFLAVLFPSNQLLCMEYNRVVRDLAGFS 621
            VYE    NL++ ++ G L  D  PCFY+Y QKMG+H+QTG++A V V +Y   +IK+HE T+  KE+DRTR T + NAN GPVFLTYR +  +DEI+AR  +  P+  F A+DG  H++W V DP  + A+Q+AF  +   Y+ADGHHRSASA +RVG    +E   +    TG E +N+F+AV+FP NQL  ++YNRVV+DL G +
Sbjct:   65 VYETAAANLRRLIDQGHLRRDPRPCFYLYRQKMGDHVQTGVLAAVSVAEYDADLIKKHEHTRKDKEDDRTRHTDICNANVGPVFLTYRADPQIDEIIARCQQSRPDFDFVADDGIGHTLWVVDDPATLAALQQAFIRIPALYVADGHHRSASA-ARVG----RERREKNPRHTGREAYNYFMAVVFPDNQLKILDYNRVVKDLHGLT 266          
BLAST of mRNA_E-fasciculatus_F_contig13941.2889.1 vs. uniprot
Match: A0A661B784_9BACT (DUF1015 domain-containing protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A661B784_9BACT)

HSP 1 Score: 207 bits (526), Expect = 7.080e-62
Identity = 104/205 (50.73%), Postives = 145/205 (70.73%), Query Frame = 1
Query:    1 VYERGNQNLKKFLENGWLVPDKTPCFYIYAQKMGEHLQTGIVAGVPVEDYALGVIKRHEKTQVKKENDRTRLTHVQNANAGPVFLTYRTNDTVDEIVARMTRETPEVQFRAEDGTEHSVWAVRDPVDVFAIQRAFEIVKTTYIADGHHRSASAFSRVGEMKIKEAVARGDVVTGEEPFNFFLAVLFPSNQLLCMEYNRVVRDLAG 615
            VY +G +NL++ ++ G+++ D  P +Y+Y Q MGEH Q G+VA   V++Y   +IK+HE T+  KE+DRTR    Q+AN+GPVFLTY+ +D +D IVA+  +E PEV F A+DG  H++W V DP  + AI+ AF  +   YIADGHHRSASA SRV +++ KE   +     GEE +NFFL+V+FP NQ++ M+YNRVVRDLAG
Sbjct:   65 VYRQGAENLQRLVKAGYMIRDPKPYYYLYRQIMGEHKQVGLVAAASVDEYDRDLIKKHELTRKAKEDDRTRHIDTQSANSGPVFLTYKHSDEIDGIVAKAIKERPEVDFTADDGIRHTLWVVSDPDRISAIREAFAKIDFLYIADGHHRSASA-SRVQKIR-KE---KNPNHNGEESYNFFLSVIFPDNQMMIMDYNRVVRDLAG 264          
BLAST of mRNA_E-fasciculatus_F_contig13941.2889.1 vs. uniprot
Match: A0A7C5TW87_9BACT (DUF1015 domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7C5TW87_9BACT)

HSP 1 Score: 206 bits (523), Expect = 1.990e-61
Identity = 99/206 (48.06%), Postives = 140/206 (67.96%), Query Frame = 1
Query:    1 VYERGNQNLKKFLENGWLVPDKTPCFYIYAQKMGEHLQTGIVAGVPVEDYALGVIKRHEKTQVKKENDRTRLTHVQNANAGPVFLTYRTNDTVDEIVARMTRETPEVQFRAEDGTEHSVWAVRDPVDVFAIQRAFEIVKTTYIADGHHRSASAFSRVGEMKIKEAV-ARGDVVTGEEPFNFFLAVLFPSNQLLCMEYNRVVRDLAG 615
            VY +G +NL++ ++ G L+ +  P +Y+Y Q+MG+H+QTG+VAG  V++Y   +IK+HE T+  KE+DRTR     +AN GPVFL YR    +D +V R+T  TP   F A DG  H++W V DP DV A++ AF  +   Y+ADGHHRSA+A      ++++ A  A     TGEEP+NFFL+V+FP +QLL ++YNRVVRDLAG
Sbjct:   65 VYAKGAENLRRLIDEGALIRENRPAYYLYRQRMGDHVQTGLVAGASVDEYEADLIKKHEHTRRAKEDDRTRHIEALDANTGPVFLAYRARPEIDALVKRLTAGTPTYDFTAPDGIAHTLWVVDDPGDVAALKEAFAAIPEMYVADGHHRSAAA------VRVRAARRAANPNHTGEEPYNFFLSVIFPHDQLLILDYNRVVRDLAG 264          
BLAST of mRNA_E-fasciculatus_F_contig13941.2889.1 vs. uniprot
Match: A0A523TLS5_9BACT (DUF1015 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523TLS5_9BACT)

HSP 1 Score: 203 bits (516), Expect = 2.160e-60
Identity = 104/207 (50.24%), Postives = 139/207 (67.15%), Query Frame = 1
Query:    1 VYERGNQNLKKFLENGWLVPDKTPCFYIYAQKMGEHLQTGIVAGVPVEDYALGVIKRHEKTQVKKENDRTRLTHVQNANAGPVFLTYRTNDTVDEIVARMTRETPEVQFRAEDGTEHSVWAVRDPVDVFAIQRAFEIVKTTYIADGHHRSASAFSRVGEMKIKEAVARGDVVTGEEPFNFFLAVLFPSNQLLCMEYNRVVRDLAGFS 621
            VYE+  +NL+K + +G +V D+ PCFY+Y QKMG H+Q GIVAG  V++Y  G+IK+HE T+  KE DR R   +  ANAGPVFLTYR +  VDEIV ++    P   F AEDG  H+ W V +   + A++ AFE +   Y+ADGHHRSA+A SRV E++ KEA       TG E +N+FL V+FP +Q+  M+YNRVV+DL G S
Sbjct:   65 VYEKSAENLQKLISDGLMVRDEKPCFYVYQQKMGGHVQAGIVAGASVDEYRNGLIKKHEFTRPDKETDRARHVEILGANAGPVFLTYRASKKVDEIVEKVRAGEPVYDFTAEDGVGHTFWVVDEEEIITALENAFEEIPALYVADGHHRSAAA-SRVREIR-KEADPDH---TGGEQYNYFLTVIFPDDQMQIMDYNRVVKDLGGMS 266          
BLAST of mRNA_E-fasciculatus_F_contig13941.2889.1 vs. uniprot
Match: A0A3D1QT94_9DELT (DUF1015 domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A3D1QT94_9DELT)

HSP 1 Score: 200 bits (508), Expect = 3.300e-59
Identity = 101/207 (48.79%), Postives = 132/207 (63.77%), Query Frame = 1
Query:    1 VYERGNQNLKKFLENGWLVPDKTPCFYIYAQKMGEHLQTGIVAGVPVEDYALGVIKRHEKTQVKKENDRTRLTHVQNANAGPVFLTYRTNDTVDEIVARMTRETPEVQFRAEDGTEHSVWAVRDPVDVFAIQRAFEIVKTTYIADGHHRSASAFSRVGEMKIKEAVARGDVVTGEEPFNFFLAVLFPSNQLLCMEYNRVVRDLAGFS 621
            VY +G +NL+ F + G LV D  PCFY+Y QKMG+H+QTG+VA   V+DY    IK+HE T+  KE+DRT+     N N  PVF  Y    ++DE+VAR+T + P   F  EDG  H+ W V D  D+   Q  F  +   YIADGHHRSAS  SRV E++ + A   G+  TGEE +NFFL V+FP +Q+  M+YNRVV+DL G S
Sbjct:   64 VYTKGLENLEHFKKEGILVKDAKPCFYLYRQKMGDHVQTGLVACASVDDYQAERIKKHELTRADKEDDRTKHVDTLNGNDEPVFFVYLARKSIDELVARLTAQAPAYDFTTEDGIGHTFWVVDDQADIERFQSEFSPIPVMYIADGHHRSASG-SRVRELRKQRA---GEKHTGEEEYNFFLTVIFPHDQMQIMDYNRVVKDLNGLS 266          
BLAST of mRNA_E-fasciculatus_F_contig13941.2889.1 vs. uniprot
Match: A0A661X934_9BACT (DUF1015 domain-containing protein n=1 Tax=candidate division KSB1 bacterium TaxID=2172550 RepID=A0A661X934_9BACT)

HSP 1 Score: 197 bits (502), Expect = 2.800e-58
Identity = 94/207 (45.41%), Postives = 134/207 (64.73%), Query Frame = 1
Query:    1 VYERGNQNLKKFLENGWLVPDKTPCFYIYAQKMGEHLQTGIVAGVPVEDYALGVIKRHEKTQVKKENDRTRLTHVQNANAGPVFLTYRTNDTVDEIVARMTRETPEVQFRAEDGTEHSVWAVRDPVDVFAIQRAFEIVKTTYIADGHHRSASAFSRVGEMKIKEAVARGDVVTGEEPFNFFLAVLFPSNQLLCMEYNRVVRDLAGFS 621
            VY +G +NL + ++ G L+ D  PCFY+Y Q MG+H+Q G+VAG  VEDY  G+IK+HE T+  KE DR +  +  NA  GPVFLTYR    +D ++ ++ +  P   F A+DG  H+ W V D  ++  +Q  F  +   Y+ADGHHRSA+A +RV +M+ K+        TGEE +N+FL V+FP NQ+  M+YNRVV+DL G+S
Sbjct:   65 VYAKGKENLDRLIKEGVLIQDDKPCFYVYRQIMGDHVQIGLVAGASVEDYEQGIIKKHELTRADKEEDRVKHVNTLNAQTGPVFLTYRAQKDIDALINKIVQRKPVYDFTADDGIRHTFWVVDDDNEIKQLQDLFARLDYLYVADGHHRSAAA-TRVKQMRQKQNPNH----TGEEEYNYFLTVIFPHNQMYIMDYNRVVKDLNGYS 266          
BLAST of mRNA_E-fasciculatus_F_contig13941.2889.1 vs. uniprot
Match: A0A3M2G8X6_9BACT (DUF1015 domain-containing protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A3M2G8X6_9BACT)

HSP 1 Score: 195 bits (495), Expect = 3.250e-57
Identity = 105/209 (50.24%), Postives = 135/209 (64.59%), Query Frame = 1
Query:    1 VYERGNQNLKKFLENGWLVPDKTPCFYIYAQKMGEHLQTGIVAGVPVEDYALGVIKRHEKTQVKKENDRTRLTHVQNANAGPVFLTYRTNDTVDEIVAR-MTRETPEVQFRAEDGTEHSVWAVRDPVDVFAIQRAF-EIVKTTYIADGHHRSASAFSRVGEMKIKEAVARGDVVTGEEPFNFFLAVLFPSNQLLCMEYNRVVRDLAGFS 621
            VY +  +NL+KF+  G LV D+TP +Y+Y Q+MG+H Q G+V    V+DY    IK+HE T+  KE DRTR   V N NAGPVFLTYR +D +D++VA   T   PE  F AEDG  H  W + D   +  I   F + + T Y+ADGHHRSASA + +G M+ ++        TGEEPFNFFLAVLFP NQL  ++YNRVV+DL G S
Sbjct:   65 VYAKAAENLQKFMAEGILVQDETPHYYLYEQQMGDHKQVGLVVAASVDDYLNDHIKKHELTRKAKEEDRTRHLDVTNCNAGPVFLTYRAHDEIDQLVADWQTHHEPENDFMAEDGIYHRFWVIDDTAVMDRITALFADQISTMYVADGHHRSASA-ANLGVMRRQQFPN----YTGEEPFNFFLAVLFPHNQLKILDYNRVVKDLNGHS 268          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13941.2889.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0D7_ECTSI1.890e-13996.62Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CBS0_9STRA1.830e-9268.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TNQ3_9STRA1.010e-8062.20Uncharacterized conserved protein UCP033563 n=3 Ta... [more]
A0A7X7UD90_9DELT2.590e-6249.28DUF1015 domain-containing protein n=1 Tax=Myxococc... [more]
A0A661B784_9BACT7.080e-6250.73DUF1015 domain-containing protein n=1 Tax=bacteriu... [more]
A0A7C5TW87_9BACT1.990e-6148.06DUF1015 domain-containing protein n=1 Tax=Acidobac... [more]
A0A523TLS5_9BACT2.160e-6050.24DUF1015 domain-containing protein n=1 Tax=Planctom... [more]
A0A3D1QT94_9DELT3.300e-5948.79DUF1015 domain-containing protein n=1 Tax=Myxococc... [more]
A0A661X934_9BACT2.800e-5845.41DUF1015 domain-containing protein n=1 Tax=candidat... [more]
A0A3M2G8X6_9BACT3.250e-5750.24DUF1015 domain-containing protein n=1 Tax=Gemmatim... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13941contigE-fasciculatus_F_contig13941:481..3021 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score407.5
Seed ortholog evalue3.7e-111
Seed eggNOG ortholog2880.D7G0D7
EggNOG free text desc.Protein of unknown function (DUF1015)
EggNOG OGs2SMYX@2759,COG4198@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size621
Cds size621
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13941.2889.1prot_E-fasciculatus_F_contig13941.2889.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13941 481..3021 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927885.408599-CDS-E-fasciculatus_F_contig13941:480..6371622927885.408599-CDS-E-fasciculatus_F_contig13941:480..637Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13941 481..637 -
1695995738.0788891-CDS-E-fasciculatus_F_contig13941:480..6371695995738.0788891-CDS-E-fasciculatus_F_contig13941:480..637Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13941 481..637 -
1622927885.4259586-CDS-E-fasciculatus_F_contig13941:1178..13371622927885.4259586-CDS-E-fasciculatus_F_contig13941:1178..1337Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13941 1179..1337 -
1695995738.0888102-CDS-E-fasciculatus_F_contig13941:1178..13371695995738.0888102-CDS-E-fasciculatus_F_contig13941:1178..1337Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13941 1179..1337 -
1622927885.4400592-CDS-E-fasciculatus_F_contig13941:2294..24291622927885.4400592-CDS-E-fasciculatus_F_contig13941:2294..2429Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13941 2295..2429 -
1695995738.097712-CDS-E-fasciculatus_F_contig13941:2294..24291695995738.097712-CDS-E-fasciculatus_F_contig13941:2294..2429Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13941 2295..2429 -
1622927885.4589264-CDS-E-fasciculatus_F_contig13941:2851..30211622927885.4589264-CDS-E-fasciculatus_F_contig13941:2851..3021Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13941 2852..3021 -
1695995738.1073604-CDS-E-fasciculatus_F_contig13941:2851..30211695995738.1073604-CDS-E-fasciculatus_F_contig13941:2851..3021Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13941 2852..3021 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13941.2889.1

>prot_E-fasciculatus_F_contig13941.2889.1 ID=prot_E-fasciculatus_F_contig13941.2889.1|Name=mRNA_E-fasciculatus_F_contig13941.2889.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=207bp
VYERGNQNLKKFLENGWLVPDKTPCFYIYAQKMGEHLQTGIVAGVPVEDY
ALGVIKRHEKTQVKKENDRTRLTHVQNANAGPVFLTYRTNDTVDEIVARM
TRETPEVQFRAEDGTEHSVWAVRDPVDVFAIQRAFEIVKTTYIADGHHRS
ASAFSRVGEMKIKEAVARGDVVTGEEPFNFFLAVLFPSNQLLCMEYNRVV
RDLAGFS
back to top

mRNA from alignment at E-fasciculatus_F_contig13941:481..3021-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13941.2889.1 ID=mRNA_E-fasciculatus_F_contig13941.2889.1|Name=mRNA_E-fasciculatus_F_contig13941.2889.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2541bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13941:481..3021- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTTTACGAGCGGGGGAACCAGAATCTCAAGAAGTTCCTCGAGAACGGCTG GCTGGTGCCCGACAAGACGCCTTGCTTCTACATCTACGCACAGAAGATGG GGGAGCACCTCCAGACAGGAATTGTGGCGGGAGTACCTGTCGAGGACTAC GCGCTGGGCGTCATCAAGCGGTGCGATTGTTGTTTTGTACCACGGAAATT GGGTGATGGACACTCACATGATGGCTTGGATGGTCTGGCGTCGAGACCAC AGACAGGGTTTTGTCCTGGGGATGGGCTGACTGTGCGTGCCGTCTGTTTG TTTCGATTTTCCTGTCGAGCGGTTGTCTATGCATGGGATGAAATATGTAA AGATGGATTCGTTGTGTCATATTTGGAAGAAGAAGAAAAGTAAAACCAAG ACCGCCTACACGCGAAAGAGTACGGGTGGTACATCTTGTCCTTCTCTGAA ACCAAAAATGTGCAAGTATAGCACATGCAACAAAGTTTAACCACAAGTAC CCTCTCAATGGCTTTTGTTCGTTTTTGGTTCTCAATGGGGATTGATGATT TTTTACCGTTTTTTGCGCCTTCGTTGGTGAACAACAACGAAGGCACGAGA AGACTCAGGTGAAGAAGGAGAACGACCGAACTAGGTTGACGCACGTGCAG AACGCCAACGCCGGCCCCGTGTTCCTCACGTACCGAACCAACGACACTGT GGACGAGATAGTCGCCAGGATGACGCGGTGAGTGCCGTGCCCTCGAGAGA CCTGTACTGTCTAACCCATGGGGGGGCTTAAGAACGCCGGCATGTGCCCG GTGCATCGACCGCCACTATTCAGAGGTCCGACACTGTTTAATGTACACAA TGTGGTGGTGCTTCAGTCTGTGCCCAGCAATTTCACCGGCGCTTGTGCAG GGCCACCGGCGCTAATCAACCCGCGTTGTTGACGCCCCCCCCCCCACTGC TGTAGTACAACACGTGGCGGCATGGCCAAAGTGACACCTAGCGTACTTGC GAAGAGTAAGTGTTTCCGGCGAGTGTGGGTCGTTTTTAAGAGCTCGTCGC AGACCGGTTGCCGAATACTTTCCAACGGATGTGCTATGTTCCGATTTTGA TTGTGCTTTTTCATTTTTGGTTTGGGGGGGAGGCATACCACGCTGACCTC TTCTTGCTTGTTACTTGTATTCGGCCGAGGTGAAGCAGCTTAGGATTCCG CGGCCACATGCTCACCTGAAATAGGGCACAAACATGCATAGAAGAAAACG AAGTTACTCGAGTTCTGTAGTTCAGTCCAAACACTCACGATGATGCAAAG TTGCCTGTCCAAGAGAAACAGAAACCAGACTAGGGCTCCATCTTGTGTGT GTGCATGTTTGTTTTTTTTTTTCCTTGTTTGTTTGTTTGTTCGGTCGGCT TCCCAGTCCTTGTTTTGATTGTTCTCCTGCGGGGCATGTATCAGACGGCT GTGTAGACTGCCGCAACAGCCATATTTGCAGCGGTTTATCGGTGTGTCTT TTCTGACGCCAATAATGCACCATCTCCAAAATACCATCTCTGAAAACCCC GTCTCCGAACTACCATCTCCAACATGCCCATCTCCCAAATACCGCATCCG AAGTACCATCTCCAACATGCCCATCTCCCAAATATCATGTCCGGAATGCG TTATGCTTTCTGCCATCTCCGAAACTAACTAAAGGGAAACCCCCGAGGTG CAGTTCCGAGCGGAAGACGGCACGGAGCACTCTGTGTGGGCCGTGAGGGA CCCCGTCGACGTGTTCGCCATACAGAGGGCGTTCGAGATCGTCAAGACCA CCTACATTGCGGACGGCCACCACCGCAGTGCCTCGGCGTTCAGGTTAGCT GTGACAGCTGTTGCTGCTCCTTTAGGACTGCTGTTGGTGTTTCGTGTGGA AAATTCCCTTCCCAGAACCTCAATAAAGTGTTCTCCAATGTATGATATAC TTCAATATTGTCTCCCCAAAACCAAAAAATAAATAATACACCCCAAACCC AAAACAAAAACAATTAATTAATATAACATACCTATACATATATTATTTAC ATCATCAGCGCACCACACGACGGACACCCTCCTGTCACCTGCTCTATGCT CTATGCATACAAGACCTCACATGGGTTCCCTGTTGACTACTACTGCTGCT GTGCTATCCCTATTTGACTGCTGTGCTAGATTCTGCCGTCTCGGTGTTAC CCGATGCTGCCTCTTTGAAGCAAAACAAGGCCGAAAGTTGGTAATTATGT GTAATGTGCCTGTATGTTGACTCCAATGTATGATATACTTCAATATGTTG ATGATGCAAGACGAATGCATTGACCCCGCTGTCAACATGACCAATTGACC TTGATGCTTCCATGTCGCCGAATCCCGTTTGGAGCAGGGTGGGTGAGATG AAGATCAAGGAGGCCGTTGCAAGGGGGGACGTGGTGACGGGCGAGGAGCC CTTCAACTTCTTCCTGGCTGTGCTGTTCCCCTCCAACCAGCTGCTCTGCA TGGAGTACAACCGGGTCGTTCGTGACCTGGCGGGCTTTTCG
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13941:481..3021-

>mRNA_E-fasciculatus_F_contig13941.2889.1 ID=mRNA_E-fasciculatus_F_contig13941.2889.1|Name=mRNA_E-fasciculatus_F_contig13941.2889.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1242bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13941:481..3021- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTTTACGAGCGGGGGAACCAGAATCTCAAGAAGTTCCTCGAGAACGGCTG
GCTGGTGCCCGACAAGACGCCTTGCTTCTACATCTACGCACAGAAGATGG
GGGAGCACCTCCAGACAGGAATTGTGGCGGGAGTACCTGTCGAGGACTAC
GCGCTGGGCGTCATCAAGCGGTTTACGAGCGGGGGAACCAGAATCTCAAG
AAGTTCCTCGAGAACGGCTGGCTGGTGCCCGACAAGACGCCTTGCTTCTA
CATCTACGCACAGAAGATGGGGGAGCACCTCCAGACAGGAATTGTGGCGG
GAGTACCTGTCGAGGACTACGCGCTGGGCGTCATCAAGCGGCACGAGAAG
ACTCAGGTGAAGAAGGAGAACGACCGAACTAGGTTGACGCACGTGCAGAA
CGCCAACGCCGGCCCCGTGTTCCTCACGTACCGAACCAACGACACTGTGG
ACGAGATAGTCGCCAGGATGACGCGGCACGAGAAGACTCAGGTGAAGAAG
GAGAACGACCGAACTAGGTTGACGCACGTGCAGAACGCCAACGCCGGCCC
CGTGTTCCTCACGTACCGAACCAACGACACTGTGGACGAGATAGTCGCCA
GGATGACGCGGGAAACCCCCGAGGTGCAGTTCCGAGCGGAAGACGGCACG
GAGCACTCTGTGTGGGCCGTGAGGGACCCCGTCGACGTGTTCGCCATACA
GAGGGCGTTCGAGATCGTCAAGACCACCTACATTGCGGACGGCCACCACC
GCAGTGCCTCGGCGTTCAGGGAAACCCCCGAGGTGCAGTTCCGAGCGGAA
GACGGCACGGAGCACTCTGTGTGGGCCGTGAGGGACCCCGTCGACGTGTT
CGCCATACAGAGGGCGTTCGAGATCGTCAAGACCACCTACATTGCGGACG
GCCACCACCGCAGTGCCTCGGCGTTCAGCAGGGTGGGTGAGATGAAGATC
AAGGAGGCCGTTGCAAGGGGGGACGTGGTGACGGGCGAGGAGCCCTTCAA
CTTCTTCCTGGCTGTGCTGTTCCCCTCCAACCAGCTGCTCTGCATGGAGT
ACAACCGGGTCGTTCGTGACCTGGCGGGCTTTTCGCAGGGTGGGTGAGAT
GAAGATCAAGGAGGCCGTTGCAAGGGGGGACGTGGTGACGGGCGAGGAGC
CCTTCAACTTCTTCCTGGCTGTGCTGTTCCCCTCCAACCAGCTGCTCTGC
ATGGAGTACAACCGGGTCGTTCGTGACCTGGCGGGCTTTTCG
back to top