mRNA_E-fasciculatus_F_contig13941.2889.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13941.2889.1 vs. uniprot
Match: D7G0D7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0D7_ECTSI) HSP 1 Score: 405 bits (1041), Expect = 1.890e-139 Identity = 200/207 (96.62%), Postives = 203/207 (98.07%), Query Frame = 1
Query: 1 VYERGNQNLKKFLENGWLVPDKTPCFYIYAQKMGEHLQTGIVAGVPVEDYALGVIKRHEKTQVKKENDRTRLTHVQNANAGPVFLTYRTNDTVDEIVARMTRETPEVQFRAEDGTEHSVWAVRDPVDVFAIQRAFEIVKTTYIADGHHRSASAFSRVGEMKIKEAVARGDVVTGEEPFNFFLAVLFPSNQLLCMEYNRVVRDLAGFS 621
VYERGNQNLKKFLENGWLVPDKTPCFY+YAQKMGEHLQTGIVAGVPVEDYALGVIKRHEKTQVKKENDRTRLTHVQNANAGPVFLTYRT++TVDEIV RMTRE PEVQFRAEDGTEHSVWAVRDPVDVFAIQRAFE VKTTYIADGHHRSASAF RVGEMKIKEAVARGDVVTGEEPFNFFLAVLFPSNQLLCMEYNRVVRDLAGFS
Sbjct: 66 VYERGNQNLKKFLENGWLVPDKTPCFYVYAQKMGEHLQTGIVAGVPVEDYALGVIKRHEKTQVKKENDRTRLTHVQNANAGPVFLTYRTSETVDEIVGRMTRENPEVQFRAEDGTEHSVWAVRDPVDVFAIQRAFESVKTTYIADGHHRSASAF-RVGEMKIKEAVARGDVVTGEEPFNFFLAVLFPSNQLLCMEYNRVVRDLAGFS 271
BLAST of mRNA_E-fasciculatus_F_contig13941.2889.1 vs. uniprot
Match: A0A836CBS0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBS0_9STRA) HSP 1 Score: 285 bits (730), Expect = 1.830e-92 Identity = 140/205 (68.29%), Postives = 165/205 (80.49%), Query Frame = 1
Query: 1 VYERGNQNLKKFLENGWLVPDKTPCFYIYAQKMGEHLQTGIVAGVPVEDYALGVIKRHEKTQVKKENDRTRLTHVQNANAGPVFLTYRTNDTVDEIVARMTRETPEVQFRAEDGTEHSVWAVRDPVDVFAIQRAFEIVKTTYIADGHHRSASAFSRVGEMKIKEAVARGDVVTGEEPFNFFLAVLFPSNQLLCMEYNRVVRDLAG 615
VYE+G +NL++F+ GWL D TPC YIYAQ MG+H+Q GI AGVPVE+YA+G+IKRHEKTQVKKENDRTRLT+VQNAN GPVFLTYR N V+ IV ++ PE +F A+DG H VW VRDP V +QRAF V +YIADGHHRSASAF RVGEMKIKEA+ARGD++TGEEPF FLAVLFP+++L MEYNRVV+DL G
Sbjct: 66 VYEKGRENLQEFIGAGWLRRDATPCLYIYAQIMGDHVQHGICAGVPVEEYAMGLIKRHEKTQVKKENDRTRLTYVQNANVGPVFLTYRDNAAVNSIVNQVIASPPETEFVADDGIGHKVWPVRDPYMVRDLQRAFAAVPCSYIADGHHRSASAF-RVGEMKIKEAIARGDIITGEEPFTHFLAVLFPASELRIMEYNRVVKDLNG 269
BLAST of mRNA_E-fasciculatus_F_contig13941.2889.1 vs. uniprot
Match: W7TNQ3_9STRA (Uncharacterized conserved protein UCP033563 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNQ3_9STRA) HSP 1 Score: 256 bits (654), Expect = 1.010e-80 Identity = 130/209 (62.20%), Postives = 158/209 (75.60%), Query Frame = 1
Query: 1 VYERGNQNLKKFLENGWLVPDKTPCFYIYAQKMGEHLQTGIVAGVPVEDYALGVIKRHEKTQVKKENDRTRLTHVQNANAGPVFLTYRTNDTVDEIVARMTRETP-EVQFRAED-GTEHSVWAVRDPVDVFAIQRAFEIVKTTYIADGHHRSASAFSRVGEMKIKEAVARGDVVTGEEPFNFFLAVLFPSNQLLCMEYNRVVRDLAGFS 621
VYERG +NLK+F+ GWL + P +YIY+Q+MG+H+Q GI VE+YA GVIKRHEKTQVKKENDRTRLT+ QNAN GPVFL Y+ +D +DEIV +T P E F A+D G EH VW V D V +I+RAFE ++ +YIADGHHRSASAF RVGEMKIKEA+A G VTG+E F FLAVLFP+NQL +EYNR+V+DL G +
Sbjct: 65 VYERGAKNLKEFISRGWLRKEAAPAYYIYSQRMGDHIQHGICGACSVEEYATGVIKRHEKTQVKKENDRTRLTYTQNANVGPVFLMYKPHDALDEIVRTVTSTRPAETSFVADDDGIEHLVWLVNDEPTVSSIRRAFESIRFSYIADGHHRSASAF-RVGEMKIKEAIAAGKNVTGDESFCLFLAVLFPANQLKILEYNRIVKDLNGLT 272
BLAST of mRNA_E-fasciculatus_F_contig13941.2889.1 vs. uniprot
Match: A0A7X7UD90_9DELT (DUF1015 domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7X7UD90_9DELT) HSP 1 Score: 208 bits (529), Expect = 2.590e-62 Identity = 102/207 (49.28%), Postives = 141/207 (68.12%), Query Frame = 1
Query: 1 VYERGNQNLKKFLENGWLVPDKTPCFYIYAQKMGEHLQTGIVAGVPVEDYALGVIKRHEKTQVKKENDRTRLTHVQNANAGPVFLTYRTNDTVDEIVARMTRETPEVQFRAEDGTEHSVWAVRDPVDVFAIQRAFEIVKTTYIADGHHRSASAFSRVGEMKIKEAVARGDVVTGEEPFNFFLAVLFPSNQLLCMEYNRVVRDLAGFS 621
VYE NL++ ++ G L D PCFY+Y QKMG+H+QTG++A V V +Y +IK+HE T+ KE+DRTR T + NAN GPVFLTYR + +DEI+AR + P+ F A+DG H++W V DP + A+Q+AF + Y+ADGHHRSASA +RVG +E + TG E +N+F+AV+FP NQL ++YNRVV+DL G +
Sbjct: 65 VYETAAANLRRLIDQGHLRRDPRPCFYLYRQKMGDHVQTGVLAAVSVAEYDADLIKKHEHTRKDKEDDRTRHTDICNANVGPVFLTYRADPQIDEIIARCQQSRPDFDFVADDGIGHTLWVVDDPATLAALQQAFIRIPALYVADGHHRSASA-ARVG----RERREKNPRHTGREAYNYFMAVVFPDNQLKILDYNRVVKDLHGLT 266
BLAST of mRNA_E-fasciculatus_F_contig13941.2889.1 vs. uniprot
Match: A0A661B784_9BACT (DUF1015 domain-containing protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A661B784_9BACT) HSP 1 Score: 207 bits (526), Expect = 7.080e-62 Identity = 104/205 (50.73%), Postives = 145/205 (70.73%), Query Frame = 1
Query: 1 VYERGNQNLKKFLENGWLVPDKTPCFYIYAQKMGEHLQTGIVAGVPVEDYALGVIKRHEKTQVKKENDRTRLTHVQNANAGPVFLTYRTNDTVDEIVARMTRETPEVQFRAEDGTEHSVWAVRDPVDVFAIQRAFEIVKTTYIADGHHRSASAFSRVGEMKIKEAVARGDVVTGEEPFNFFLAVLFPSNQLLCMEYNRVVRDLAG 615
VY +G +NL++ ++ G+++ D P +Y+Y Q MGEH Q G+VA V++Y +IK+HE T+ KE+DRTR Q+AN+GPVFLTY+ +D +D IVA+ +E PEV F A+DG H++W V DP + AI+ AF + YIADGHHRSASA SRV +++ KE + GEE +NFFL+V+FP NQ++ M+YNRVVRDLAG
Sbjct: 65 VYRQGAENLQRLVKAGYMIRDPKPYYYLYRQIMGEHKQVGLVAAASVDEYDRDLIKKHELTRKAKEDDRTRHIDTQSANSGPVFLTYKHSDEIDGIVAKAIKERPEVDFTADDGIRHTLWVVSDPDRISAIREAFAKIDFLYIADGHHRSASA-SRVQKIR-KE---KNPNHNGEESYNFFLSVIFPDNQMMIMDYNRVVRDLAG 264
BLAST of mRNA_E-fasciculatus_F_contig13941.2889.1 vs. uniprot
Match: A0A7C5TW87_9BACT (DUF1015 domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7C5TW87_9BACT) HSP 1 Score: 206 bits (523), Expect = 1.990e-61 Identity = 99/206 (48.06%), Postives = 140/206 (67.96%), Query Frame = 1
Query: 1 VYERGNQNLKKFLENGWLVPDKTPCFYIYAQKMGEHLQTGIVAGVPVEDYALGVIKRHEKTQVKKENDRTRLTHVQNANAGPVFLTYRTNDTVDEIVARMTRETPEVQFRAEDGTEHSVWAVRDPVDVFAIQRAFEIVKTTYIADGHHRSASAFSRVGEMKIKEAV-ARGDVVTGEEPFNFFLAVLFPSNQLLCMEYNRVVRDLAG 615
VY +G +NL++ ++ G L+ + P +Y+Y Q+MG+H+QTG+VAG V++Y +IK+HE T+ KE+DRTR +AN GPVFL YR +D +V R+T TP F A DG H++W V DP DV A++ AF + Y+ADGHHRSA+A ++++ A A TGEEP+NFFL+V+FP +QLL ++YNRVVRDLAG
Sbjct: 65 VYAKGAENLRRLIDEGALIRENRPAYYLYRQRMGDHVQTGLVAGASVDEYEADLIKKHEHTRRAKEDDRTRHIEALDANTGPVFLAYRARPEIDALVKRLTAGTPTYDFTAPDGIAHTLWVVDDPGDVAALKEAFAAIPEMYVADGHHRSAAA------VRVRAARRAANPNHTGEEPYNFFLSVIFPHDQLLILDYNRVVRDLAG 264
BLAST of mRNA_E-fasciculatus_F_contig13941.2889.1 vs. uniprot
Match: A0A523TLS5_9BACT (DUF1015 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523TLS5_9BACT) HSP 1 Score: 203 bits (516), Expect = 2.160e-60 Identity = 104/207 (50.24%), Postives = 139/207 (67.15%), Query Frame = 1
Query: 1 VYERGNQNLKKFLENGWLVPDKTPCFYIYAQKMGEHLQTGIVAGVPVEDYALGVIKRHEKTQVKKENDRTRLTHVQNANAGPVFLTYRTNDTVDEIVARMTRETPEVQFRAEDGTEHSVWAVRDPVDVFAIQRAFEIVKTTYIADGHHRSASAFSRVGEMKIKEAVARGDVVTGEEPFNFFLAVLFPSNQLLCMEYNRVVRDLAGFS 621
VYE+ +NL+K + +G +V D+ PCFY+Y QKMG H+Q GIVAG V++Y G+IK+HE T+ KE DR R + ANAGPVFLTYR + VDEIV ++ P F AEDG H+ W V + + A++ AFE + Y+ADGHHRSA+A SRV E++ KEA TG E +N+FL V+FP +Q+ M+YNRVV+DL G S
Sbjct: 65 VYEKSAENLQKLISDGLMVRDEKPCFYVYQQKMGGHVQAGIVAGASVDEYRNGLIKKHEFTRPDKETDRARHVEILGANAGPVFLTYRASKKVDEIVEKVRAGEPVYDFTAEDGVGHTFWVVDEEEIITALENAFEEIPALYVADGHHRSAAA-SRVREIR-KEADPDH---TGGEQYNYFLTVIFPDDQMQIMDYNRVVKDLGGMS 266
BLAST of mRNA_E-fasciculatus_F_contig13941.2889.1 vs. uniprot
Match: A0A3D1QT94_9DELT (DUF1015 domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A3D1QT94_9DELT) HSP 1 Score: 200 bits (508), Expect = 3.300e-59 Identity = 101/207 (48.79%), Postives = 132/207 (63.77%), Query Frame = 1
Query: 1 VYERGNQNLKKFLENGWLVPDKTPCFYIYAQKMGEHLQTGIVAGVPVEDYALGVIKRHEKTQVKKENDRTRLTHVQNANAGPVFLTYRTNDTVDEIVARMTRETPEVQFRAEDGTEHSVWAVRDPVDVFAIQRAFEIVKTTYIADGHHRSASAFSRVGEMKIKEAVARGDVVTGEEPFNFFLAVLFPSNQLLCMEYNRVVRDLAGFS 621
VY +G +NL+ F + G LV D PCFY+Y QKMG+H+QTG+VA V+DY IK+HE T+ KE+DRT+ N N PVF Y ++DE+VAR+T + P F EDG H+ W V D D+ Q F + YIADGHHRSAS SRV E++ + A G+ TGEE +NFFL V+FP +Q+ M+YNRVV+DL G S
Sbjct: 64 VYTKGLENLEHFKKEGILVKDAKPCFYLYRQKMGDHVQTGLVACASVDDYQAERIKKHELTRADKEDDRTKHVDTLNGNDEPVFFVYLARKSIDELVARLTAQAPAYDFTTEDGIGHTFWVVDDQADIERFQSEFSPIPVMYIADGHHRSASG-SRVRELRKQRA---GEKHTGEEEYNFFLTVIFPHDQMQIMDYNRVVKDLNGLS 266
BLAST of mRNA_E-fasciculatus_F_contig13941.2889.1 vs. uniprot
Match: A0A661X934_9BACT (DUF1015 domain-containing protein n=1 Tax=candidate division KSB1 bacterium TaxID=2172550 RepID=A0A661X934_9BACT) HSP 1 Score: 197 bits (502), Expect = 2.800e-58 Identity = 94/207 (45.41%), Postives = 134/207 (64.73%), Query Frame = 1
Query: 1 VYERGNQNLKKFLENGWLVPDKTPCFYIYAQKMGEHLQTGIVAGVPVEDYALGVIKRHEKTQVKKENDRTRLTHVQNANAGPVFLTYRTNDTVDEIVARMTRETPEVQFRAEDGTEHSVWAVRDPVDVFAIQRAFEIVKTTYIADGHHRSASAFSRVGEMKIKEAVARGDVVTGEEPFNFFLAVLFPSNQLLCMEYNRVVRDLAGFS 621
VY +G +NL + ++ G L+ D PCFY+Y Q MG+H+Q G+VAG VEDY G+IK+HE T+ KE DR + + NA GPVFLTYR +D ++ ++ + P F A+DG H+ W V D ++ +Q F + Y+ADGHHRSA+A +RV +M+ K+ TGEE +N+FL V+FP NQ+ M+YNRVV+DL G+S
Sbjct: 65 VYAKGKENLDRLIKEGVLIQDDKPCFYVYRQIMGDHVQIGLVAGASVEDYEQGIIKKHELTRADKEEDRVKHVNTLNAQTGPVFLTYRAQKDIDALINKIVQRKPVYDFTADDGIRHTFWVVDDDNEIKQLQDLFARLDYLYVADGHHRSAAA-TRVKQMRQKQNPNH----TGEEEYNYFLTVIFPHNQMYIMDYNRVVKDLNGYS 266
BLAST of mRNA_E-fasciculatus_F_contig13941.2889.1 vs. uniprot
Match: A0A3M2G8X6_9BACT (DUF1015 domain-containing protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A3M2G8X6_9BACT) HSP 1 Score: 195 bits (495), Expect = 3.250e-57 Identity = 105/209 (50.24%), Postives = 135/209 (64.59%), Query Frame = 1
Query: 1 VYERGNQNLKKFLENGWLVPDKTPCFYIYAQKMGEHLQTGIVAGVPVEDYALGVIKRHEKTQVKKENDRTRLTHVQNANAGPVFLTYRTNDTVDEIVAR-MTRETPEVQFRAEDGTEHSVWAVRDPVDVFAIQRAF-EIVKTTYIADGHHRSASAFSRVGEMKIKEAVARGDVVTGEEPFNFFLAVLFPSNQLLCMEYNRVVRDLAGFS 621
VY + +NL+KF+ G LV D+TP +Y+Y Q+MG+H Q G+V V+DY IK+HE T+ KE DRTR V N NAGPVFLTYR +D +D++VA T PE F AEDG H W + D + I F + + T Y+ADGHHRSASA + +G M+ ++ TGEEPFNFFLAVLFP NQL ++YNRVV+DL G S
Sbjct: 65 VYAKAAENLQKFMAEGILVQDETPHYYLYEQQMGDHKQVGLVVAASVDDYLNDHIKKHELTRKAKEEDRTRHLDVTNCNAGPVFLTYRAHDEIDQLVADWQTHHEPENDFMAEDGIYHRFWVIDDTAVMDRITALFADQISTMYVADGHHRSASA-ANLGVMRRQQFPN----YTGEEPFNFFLAVLFPHNQLKILDYNRVVKDLNGHS 268 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13941.2889.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13941.2889.1 >prot_E-fasciculatus_F_contig13941.2889.1 ID=prot_E-fasciculatus_F_contig13941.2889.1|Name=mRNA_E-fasciculatus_F_contig13941.2889.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=207bp VYERGNQNLKKFLENGWLVPDKTPCFYIYAQKMGEHLQTGIVAGVPVEDYback to top mRNA from alignment at E-fasciculatus_F_contig13941:481..3021- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13941.2889.1 ID=mRNA_E-fasciculatus_F_contig13941.2889.1|Name=mRNA_E-fasciculatus_F_contig13941.2889.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2541bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13941:481..3021- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13941:481..3021- >mRNA_E-fasciculatus_F_contig13941.2889.1 ID=mRNA_E-fasciculatus_F_contig13941.2889.1|Name=mRNA_E-fasciculatus_F_contig13941.2889.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1242bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13941:481..3021- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |