mRNA_E-fasciculatus_F_contig13921.2881.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13921.2881.1
Unique NamemRNA_E-fasciculatus_F_contig13921.2881.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig13921.2881.1 vs. uniprot
Match: A0A6H5K1M2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1M2_9PHAE)

HSP 1 Score: 577 bits (1487), Expect = 2.000e-193
Identity = 390/458 (85.15%), Postives = 400/458 (87.34%), Query Frame = 2
Query:    2 EYCSDLSGSASCPVTPLGFDECPPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLVTVKLARSQMPSRWAAPPPPFQTCLRDVRPADKLGGRAGSGGRACGXXXXXXXXXXXXXSMLGLGEGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWGAPDTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIADQSMVFKDVLGRPIVYAEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXXXXXGGRSTGFRCIPKEVYRWLDAVWPLRSGGETPGGSCSSGSGGAKRKTPSPTPSHDGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQADMTEYRRALQRYVEEVLRHEEPSPPSSGSPRSPG-GAASPEVVVVDPP 1372
            EYCSDL+GSAS P++PLGFDECPP AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  N+VTVKLARSQMPSRWAAPPPPF+TCLRDVRPADKLGGRA      CGXXXXXXXXXXXX SMLGLGEGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWGA DTP               XXXXXXXXX                  +ADQSMVFKDVLGRPIVY+EKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXX    GGRSTGFRCIPKEVYRWLDAVWPLRSGGE  GGSCSSGSGG+KRK PSPTPSH+GWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMRED+DAWTTQADMTEYRRALQRYVEEVLRHEE  P SSGS RSP  GAASPEVVVVDPP
Sbjct:  187 EYCSDLAGSASPPLSPLGFDECPPIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--NVVTVKLARSQMPSRWAAPPPPFKTCLRDVRPADKLGGRA------CGXXXXXXXXXXXX-SMLGLGEGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWGASDTPPPAAAASGGDAMGSEXXXXXXXXXAATAANAD----------LADQSMVFKDVLGRPIVYSEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXAP--GGRSTGFRCIPKEVYRWLDAVWPLRSGGEIRGGSCSSGSGGSKRKAPSPTPSHEGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDIDAWTTQADMTEYRRALQRYVEEVLRHEEELPTSSGSTRSPDDGAASPEVVVVDPP 623          
BLAST of mRNA_E-fasciculatus_F_contig13921.2881.1 vs. uniprot
Match: D8LIB2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB2_ECTSI)

HSP 1 Score: 565 bits (1455), Expect = 1.420e-188
Identity = 387/432 (89.58%), Postives = 395/432 (91.44%), Query Frame = 2
Query:  200 NLVTVKLARSQMPSRWAAPPPPFQTCLRDVRPADKLGGRAGSGGRACGXXXXXXXXXXXXXSMLGLGEGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWGAPDTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------AIADQSMVFKDVLGRPIVYAEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXXXXXGGRSTGFRCIPKEVYRWLDAVWPLRSGGETPGGSCSSGSGGAKRKTPSPTPSHDGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQADMTEYRRALQRYVEEVLRHEEPSPPSSGSPRSPG-GAASPEVVVVDPPPSPLPLPXXXXXXXXXXXXXXXXXXTASAPVALS 1474
            N+VTVKLARSQMPSRWAAPPPPF+TCLRDVRPADKLGGRA SGGRACGXXXXXXXXXXXX SMLGLGEGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWGAPDTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      A+ADQSMVFKDVLGRPIVY+EKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXX    GGRSTGFRCIPKEVYRWLDAVWPLRSGGE  GGSCSSGSGG+KRK PSPTPSH+GWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQADMTEYRRALQRYVEEVLR EE  P SSG P SP  GAASPEVVVVDPP   LPLP     XXXXXXX      TASAP++LS
Sbjct:  233 NVVTVKLARSQMPSRWAAPPPPFETCLRDVRPADKLGGRA-SGGRACGXXXXXXXXXXXX-SMLGLGEGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWGAPDTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAANAALADQSMVFKDVLGRPIVYSEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXAP--GGRSTGFRCIPKEVYRWLDAVWPLRSGGEIRGGSCSSGSGGSKRKAPSPTPSHEGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQADMTEYRRALQRYVEEVLRQEEDPPTSSGRPWSPDDGAASPEVVVVDPP---LPLPASAPLXXXXXXXVPAT--TASAPLSLS 655          
BLAST of mRNA_E-fasciculatus_F_contig13921.2881.1 vs. uniprot
Match: A0A836CDU6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDU6_9STRA)

HSP 1 Score: 210 bits (534), Expect = 2.430e-57
Identity = 134/346 (38.73%), Postives = 166/346 (47.98%), Query Frame = 2
Query:  233 MPSRWAAPPPPFQTCLRDVRPADKLGGRAGSGGRACGXXXXXXXXXXXXXSMLGLGEGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWGAPDTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIADQSMVFKDVLGRPIVYAEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXXXXXGGRSTGFRCIPKEVYRWLDAVWPLRSGGETPGGSCSSGSGGAKRKTPSPTPSHDGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQADMTEYRRALQRYV 1270
            MP RWA P PPF TCL    P   L  R+ S G                  + G   GD VD ++WL+S FID+V+A+FA  Y   HFMPI+FA   L   G  D                                                     D+LG+ I YA ++P+IFL +V N+HWNLLRV+H PVPELQLFEP+GKP +R                            +R IPK+V+ WLD +             C+ G G               WA+R+ SAITRQQQTTGFDCGVASLLYAEKCGQ QMRED+DA TTQ D+T YR+ LQ+++
Sbjct:    1 MPYRWAEPLPPFVTCLNQPAPLRLL--RSPSSGGLVATDGV----------LRGALYGDSVDDESWLTSSFIDMVLAQFAACYRGAHFMPIEFAAFRLARMGRADMAACT------------------------------------------------DILGQTIDYAARKPIIFLANVKNLHWNLLRVQHFPVPELQLFEPLGKPAKRA-----------------HGAHSSEGVSYRYIPKDVFVWLDTM-------------CARGGG---------------WATRSVSAITRQQQTTGFDCGVASLLYAEKCGQDQMREDIDAATTQDDITAYRQVLQKFL 241          
BLAST of mRNA_E-fasciculatus_F_contig13921.2881.1 vs. uniprot
Match: A0A7S2GCQ8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GCQ8_9STRA)

HSP 1 Score: 185 bits (470), Expect = 2.900e-48
Identity = 122/354 (34.46%), Postives = 159/354 (44.92%), Query Frame = 2
Query:  203 LVTVKLARSQMPSRWAAPPPPFQTCLRDVRPADKLGGRAGSGGRACGXXXXXXXXXXXXXSMLGLGEGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWGAPDTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIADQSMVFKDVLGRPIVYAEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXXXXXGGRSTGFRCIPKEVYRWLDAVWPLRSGGETPGGSCSSGSGGAKRKTPSPTPSHDGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQADMTEYRRALQR 1264
            +VTV+LAR +MP RW  P PPF + L +    D+        G AC              SM     GD V  ++WLSS FID+V+++FA+TY ++HFMPI+F+   L      D                                                 +   D++G+ I Y   +PVIF  ++ N+HWN+LRV+H P+ ELQLFEPMGKP  R G                          +R IP+ +  WLD  WPL  G     G  S                   W  +A SAIT Q Q   FDCGVA LLYAEKC QG M+ED+ A T Q D+TE+R+ LQR
Sbjct:   73 VVTVRLARCKMPYRWREPLPPFVSILSETELFDQWSEAPDDTGAAC------ISESVLHRSM----NGDEVKDESWLSSSFIDLVLSRFAKTYRSMHFMPIEFSEFRLKTMQKSDM------------------------------------------------LQATDLVGKKIDYNIPKPVIFFANIANMHWNVLRVQHWPLKELQLFEPMGKPASRNG------------------------VSYRNIPQHIIHWLDTCWPLDEGHPKDSGGRS-------------------WIVQACSAITTQHQVNSFDCGVACLLYAEKCAQGMMKEDIHATTNQRDITEFRQCLQR 325          
BLAST of mRNA_E-fasciculatus_F_contig13921.2881.1 vs. uniprot
Match: A0A7S2SPQ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPQ6_9STRA)

HSP 1 Score: 184 bits (467), Expect = 4.090e-48
Identity = 122/359 (33.98%), Postives = 158/359 (44.01%), Query Frame = 2
Query:  203 LVTVKLARSQMPSRWAAPPPPFQTCLRDVRPADKLGGRAGSGGRACGXXXXXXXXXXXXXSMLGLGEGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWGAPDTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIADQSMVFKDVLGRPIVYAEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXXXXXGGRSTGFRCIPKEVYRWLDAVWPLRSGGETPGGSCSSGSGGAKRKTPSPTPSHDGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQADMTEYRRALQRYVEEV 1279
            +VTV+LAR +MP RW  P PPF + L  V            G                      L   +V D ++WLSS FID+V++++AR Y NVHFMP++FA   L      D                                                     D+LG+ I Y  ++PV+FL ++ N+HWNL RV+H P+ ELQLFEPMGKP  R G                           R IPK +  WLD VWPL S  E+                         W  R+ SAIT Q Q TGFDCGVA +LYAEKC QG M+ED+D  T Q+D T++R+ LQR + E+
Sbjct:   70 VVTVRLARCKMPYRWREPLPPFVSILNHV------------GALHLDSDARRLDHATVTVLRRALSSDEVQD-ESWLSSSFIDLVLSRYARRYPNVHFMPVEFAAFRLKTMQTVDM------------------------------------------------FQATDILGQRIDYNMRKPVVFLANIANMHWNLFRVQHWPLKELQLFEPMGKPATRHG------------------------VSLRYIPKHIIHWLDTVWPLGSEAES-------------------------WLFRSCSAITTQHQLTGFDCGVACILYAEKCAQGLMKEDIDDSTKQSDFTQFRQDLQRRLSEL 318          
BLAST of mRNA_E-fasciculatus_F_contig13921.2881.1 vs. uniprot
Match: A0A7S2SPU9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPU9_9STRA)

HSP 1 Score: 147 bits (370), Expect = 4.370e-37
Identity = 80/190 (42.11%), Postives = 102/190 (53.68%), Query Frame = 2
Query:  710 VLGRPIVYAEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXXXXXGGRSTGFRCIPKEVYRWLDAVWPLRSGGETPGGSCSSGSGGAKRKTPSPTPSHDGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQADMTEYRRALQRYVEEV 1279
            +LG+ I Y  ++PV+FL ++ N+HWNL RV+H P+ ELQLFEPMGKP  R G                           R IPK +  WLD VWPL S  E+                         W  R+ SAIT Q Q TGFDCGVA +LYAEKC QG M+ED+D  T Q+D T++R+ LQR + E+
Sbjct:    5 ILGQRIDYNMRKPVVFLANIANMHWNLFRVQHWPLKELQLFEPMGKPATRHG------------------------VSLRYIPKHIIHWLDTVWPLGSEAES-------------------------WLFRSCSAITTQHQLTGFDCGVACILYAEKCAQGLMKEDIDDSTKQSDFTQFRQDLQRRLSEL 145          
BLAST of mRNA_E-fasciculatus_F_contig13921.2881.1 vs. uniprot
Match: A0A5D6Y3L5_9STRA (ULP_PROTEASE domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3L5_9STRA)

HSP 1 Score: 147 bits (372), Expect = 6.180e-36
Identity = 95/306 (31.05%), Postives = 131/306 (42.81%), Query Frame = 2
Query:  401 EGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWGAPDTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIADQSMVFKDVLGRPIVYAEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXXXXXGGRSTGFRCIPKEVYRWLDAVWPLRSGGETPGGSCSSGSGGAKRKTPSPTPSHDGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQADMTEYRRALQRYVEEVLRHEEPSPPSSGS 1318
            E D +D  +WL+S  +D+++ + A  Y  VHF+P DF    L G     +                                            +D     +DVLGR + Y   RP++F  +   +HWNL RV+  P PELQLFEPMG+P  R G                           R +P+ V  WL+A +P                             H  W SRA SAIT  QQ +GFDCGVA LLYA+KCGQGQ R+++DA T Q  +T +R  LQ+ ++ +  +   S  SSG+
Sbjct:   54 EDDSIDDTSWLTSTLMDLMLWRLAGQYPGVHFLPTDFFHCVLEGRSRSRSQHGRKRGP------------------------------------SDCDFRVRDVLGRLVDYGSNRPLLFAVNCGRIHWNLFRVQLTPQPELQLFEPMGRPSSRSGL------------------------SHRYVPRSVVEWLEACYPQ----------------------------HPSWISRAVSAITAPQQVSGFDCGVACLLYADKCGQGQTRQEIDARTDQLAITGFRATLQQQLQAMQNNLNNSSSSSGN 271          
BLAST of mRNA_E-fasciculatus_F_contig13921.2881.1 vs. uniprot
Match: A0A7S1C2Y9_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C2Y9_9STRA)

HSP 1 Score: 133 bits (334), Expect = 3.420e-32
Identity = 83/191 (43.46%), Postives = 101/191 (52.88%), Query Frame = 2
Query:  716 GRPIVYA---EKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXXXXXGGRSTGFRCIPKEVYRWLDAVWPLRSGGETPGGSCSSGSGGAKRKTPSPTPSHDGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQADMTEYRRALQRYVEEV 1279
            G P++ A   E RP++F  +V N+HWNLLRV     PEL+++EPMG+P  RQ                     G  S   R +P+ V  WLDAV             CS G GG              W SRA SAIT + Q TGFDCGVA LLYAEKC Q Q REDV+AWT QAD+T +RR LQ + E +
Sbjct:   18 GEPLLPATAEESRPLLFFWNVGNMHWNLLRVLRGRRPELEIYEPMGRPVSRQ-------------------RDGVLSA--RSLPRCVVTWLDAV-------------CSLGEGGGS------------WGSRALSAITIKHQVTGFDCGVACLLYAEKCAQRQAREDVEAWTDQADITAFRRTLQDFFETI 162          
BLAST of mRNA_E-fasciculatus_F_contig13921.2881.1 vs. uniprot
Match: A0A662YFQ0_9STRA (ULP_PROTEASE domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YFQ0_9STRA)

HSP 1 Score: 134 bits (337), Expect = 8.430e-31
Identity = 85/291 (29.21%), Postives = 119/291 (40.89%), Query Frame = 2
Query:  398 GEGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWGAPDTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIADQSMVFKDVLGRPIVYAEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXXXXXGGRSTGFRCIPKEVYRWLDAVWPLRSGGETPGGSCSSGSGGAKRKTPSPTPSHDGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQADMTEYRRALQRYV 1270
            G  D +D  +WL+   ID+++ KFA  Y  VHF+P  F    L    A                                                 +    +DVLGR + Y    P++F+ +V  +HWNL RV+  P P LQLFEPMG+   R G                          +R +P+ V  WL+  +P                             H GW +R  SAIT +QQ +GFDCGVA LLYA+KCG+GQ  E+++A   Q  +T +R+ LQR +
Sbjct:   95 GPEDRIDETSWLTGTLIDLMLWKFANLYPTVHFLPTAFFHFHLEATNASSGVPWRRRRRRPKRLK--------------------------------RDYQVRDVLGRVVDYDSDTPLVFIVNVGQIHWNLFRVQLQPTPRLQLFEPMGRLASRTGI------------------------SYRSVPRSVIEWLETCYPQ----------------------------HTGWLARTVSAITHKQQVSGFDCGVACLLYADKCGRGQSGEEINAQIDQQAITSFRKQLQRQL 301          
BLAST of mRNA_E-fasciculatus_F_contig13921.2881.1 vs. uniprot
Match: A0A484E1F7_BRELC (ULP_PROTEASE domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E1F7_BRELC)

HSP 1 Score: 131 bits (330), Expect = 4.540e-30
Identity = 84/288 (29.17%), Postives = 121/288 (42.01%), Query Frame = 2
Query:  395 LGEGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWGAPDTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIADQSMVFKDVLGRPIVYAEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXXXXXGGRSTGFRCIPKEVYRWLDAVWPLRSGGETPGGSCSSGSGGAKRKTPSPTPSHDGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQADMTEYRRAL 1258
            +G  D VD  NW++   ID+V+ KFA++Y  V+F+P  F  L L                                                    + +  + +DVLGR + Y  K+PV+F+ +V+ +HWNL RV+  P P+LQLFEPMGK   R G                          +R +P+ V  WL+  +P                             H  W  R  SAI  +QQ +GFDCGVA LLYA+KCG+GQ  E+++    Q  +T +R+ L
Sbjct:   92 IGPEDCVDESNWITGTLIDLVLWKFAKSYAAVYFLPTAFYHLHLE--------------------------------MAQEIAVRPSWPQRSRGLRSKRDFIVRDVLGRVVDYNSKKPVVFVVNVDQIHWNLFRVQLSPKPKLQLFEPMGKLASRSGI------------------------SYRSVPRAVIEWLNVCYPQ----------------------------HKCWLQRTMSAIENKQQVSGFDCGVACLLYADKCGRGQSGEEINDSIDQNAITSFRKQL 295          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13921.2881.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K1M2_9PHAE2.000e-19385.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIB2_ECTSI1.420e-18889.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CDU6_9STRA2.430e-5738.73Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2GCQ8_9STRA2.900e-4834.46Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2SPQ6_9STRA4.090e-4833.98Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2SPU9_9STRA4.370e-3742.11Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A5D6Y3L5_9STRA6.180e-3631.05ULP_PROTEASE domain-containing protein n=1 Tax=Pyt... [more]
A0A7S1C2Y9_9STRA3.420e-3243.46Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A662YFQ0_9STRA8.430e-3129.21ULP_PROTEASE domain-containing protein n=2 Tax=Not... [more]
A0A484E1F7_BRELC4.540e-3029.17ULP_PROTEASE domain-containing protein n=1 Tax=Bre... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13921contigE-fasciculatus_F_contig13921:468..3489 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score552.4
Seed ortholog evalue1.8e-154
Seed eggNOG ortholog2880.D8LIB2
EggNOG OGs2DSZD@1,2S6H1@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-24_001490.1
Exons2
Model size2613
Cds size1245
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13921.2881.1prot_E-fasciculatus_F_contig13921.2881.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13921 1604..3257 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927884.2472591-UTR-E-fasciculatus_F_contig13921:467..16031622927884.2472591-UTR-E-fasciculatus_F_contig13921:467..1603Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13921 468..1603 -
1695995737.4212246-UTR-E-fasciculatus_F_contig13921:467..16031695995737.4212246-UTR-E-fasciculatus_F_contig13921:467..1603Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13921 468..1603 -
1622927884.282261-UTR-E-fasciculatus_F_contig13921:3257..34891622927884.282261-UTR-E-fasciculatus_F_contig13921:3257..3489Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13921 3258..3489 -
1695995737.4629676-UTR-E-fasciculatus_F_contig13921:3257..34891695995737.4629676-UTR-E-fasciculatus_F_contig13921:3257..3489Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig13921 3258..3489 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927884.257425-CDS-E-fasciculatus_F_contig13921:1603..21161622927884.257425-CDS-E-fasciculatus_F_contig13921:1603..2116Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13921 1604..2116 -
1695995737.4319367-CDS-E-fasciculatus_F_contig13921:1603..21161695995737.4319367-CDS-E-fasciculatus_F_contig13921:1603..2116Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13921 1604..2116 -
1622927884.2672591-CDS-E-fasciculatus_F_contig13921:2525..32571622927884.2672591-CDS-E-fasciculatus_F_contig13921:2525..3257Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13921 2526..3257 -
1695995737.449122-CDS-E-fasciculatus_F_contig13921:2525..32571695995737.449122-CDS-E-fasciculatus_F_contig13921:2525..3257Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13921 2526..3257 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13921.2881.1

>prot_E-fasciculatus_F_contig13921.2881.1 ID=prot_E-fasciculatus_F_contig13921.2881.1|Name=mRNA_E-fasciculatus_F_contig13921.2881.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=415bp
MPSRWAAPPPPFQTCLRDVRPADKLGGRAGSGGRACGGGSGDDAAAAAAA
SMLGLGEGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNG
WGAPDTPPPAAAAAAAAPGGDAGGSKSGGNAGGAEATTAATAADAAAAAI
ADQSMVFKDVLGRPIVYAEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLF
EPMGKPPRRQGGSRYTQQQGGGGAGGGSGPPGGRSTGFRCIPKEVYRWLD
AVWPLRSGGETPGGSCSSGSGGAKRKTPSPTPSHDGWASRAYSAITRQQQ
TTGFDCGVASLLYAEKCGQGQMREDVDAWTTQADMTEYRRALQRYVEEVL
RHEEPSPPSSGSPRSPGGAASPEVVVVDPPPSPLPLPPLSSAPRPPAAAV
PVPAATASAPVALS*
back to top

mRNA from alignment at E-fasciculatus_F_contig13921:468..3489-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13921.2881.1 ID=mRNA_E-fasciculatus_F_contig13921.2881.1|Name=mRNA_E-fasciculatus_F_contig13921.2881.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3022bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13921:468..3489- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CGAGTACTGCAGCGATTTGTCGGGCAGTGCCTCGTGCCCCGTGACTCCGT TGGGCTTCGACGAATGCCCCCCGACCGCCGCAGCAGCAGCGGCAGCAGCA GCCACTGATGAGAGCGGAACCTCCTCGCCGGACGGCAAAAACAAGTCCCG AACGAGAGACGATGACGAGGAGCAGCAGAGGGCGAGCAAGAAGCGGCGGA ACTTGGTTACCGTTAAGCTGGCCCGGTCGCAGATGCCGTCGCGGTGGGCG GCGCCGCCGCCGCCGTTCCAGACGTGCCTCAGGGACGTTCGGCCCGCGGA CAAGCTGGGCGGTCGGGCCGGCAGCGGCGGTCGCGCCTGCGGTGGGGGCA GTGGGGACGACGCGGCCGCTGCGGCGGCCGCCAGCATGCTCGGACTCGGG GAGGGGGACGTCGTCGACGCGAAGAACTGGCTTAGCTCGGGGTTCATCGA CGTCGTCATGGCCAAGTTCGCCCGCACGTACACGAACGTCCACTTCATGC CGATCGACTTCGCCGTGCTGTGCCTGAACGGGTGGGGCGCTCCGGACACG CCTCCTCCTGCGGCCGCCGCCGCCGCCGCCGCTCCAGGCGGCGACGCCGG GGGCAGCAAGAGCGGCGGTAACGCGGGAGGCGCCGAAGCCACGACGGCCG CCACCGCAGCCGATGCCGCCGCCGCCGCTATTGCCGACCAGAGCATGGTC TTCAAGGACGTACTGGGCCGACCGATTGTGTACGCGGAGAAGCGGCCGGT GATCTTCCTGACCCACGTCAACAACGTCCACTGGAACCTCCTCCGCGTGG AGCACGACCCCGTTCCCGAGCTGCAGCTGTTCGAGCCGATGGGGAAGCCT CCGCGCCGGCAGGGGGGCTCGCGGTACACCCAGCAGCAGGGGGGCGGTGG GGCCGGCGGTGGCAGTGGGCCCCCCGGCGGGCGAAGCACCGGTTTCCGGT GCATCCCTAAAGAAGTGAGTGGTCGAAGTAAACGTCCGGTAGACCGCTCT GTACCTTAGGTCTGTGTCATTTGTTTTCTTGTTGCAGTTTTCCCAAGCCC GTCGGGCACGGTACGTTTGATCTCCTTCCTCCTTTTTTTCTGGTTTTCCT GACTGATGCCAACTCTTGGCTCGCTCGTGTCGTGCCAAGCGTTTTATTTT GGCGGATCGCGATGTTCCAAAGCCTGTCGGGCGTGTACGCTTAGCAGCTA CCCGGGCCGGTTCAACTTCCCCTCCTCTCCCTCGAGCAGGAAGTAAGATC ATGGTCTACTTCGATGGGTTTCACACACACACTCGTTCGCAACCACGAGA AATTGCCTCAACAGCTTTCCTAGCCGAAGAACGTTATCCTAACAAAACCC CTTTCCACGCCCCCGCCCTACAGGTATACCGTTGGCTGGACGCCGTGTGG CCGTTGCGATCCGGAGGGGAGACCCCCGGCGGGAGTTGCAGCAGCGGCAG CGGGGGTGCGAAGAGGAAAACCCCCAGCCCTACGCCGTCGCACGACGGCT GGGCTTCGCGCGCGTACTCGGCGATCACCCGGCAGCAGCAGACGACCGGG TTCGACTGCGGCGTGGCCTCCCTGCTGTACGCGGAGAAGTGCGGGCAGGG GCAGATGCGCGAGGACGTGGATGCGTGGACGACCCAGGCTGACATGACGG AGTACAGGCGCGCGCTTCAGCGCTACGTTGAGGAGGTCCTGCGCCACGAA GAGCCTTCCCCGCCATCGTCCGGCAGTCCACGGAGCCCCGGTGGCGCGGC GTCGCCTGAGGTGGTGGTGGTTGACCCGCCGCCGTCACCGCTGCCGCTGC CGCCGTTGTCCTCCGCCCCCCGTCCCCCCGCTGCTGCGGTACCGGTACCG GCGGCGACGGCTTCGGCCCCGGTGGCGCTGTCGTAGGGATAAATGATCGT TTCGTTGCCCTGAGGGGTGAAAAACACGTGTATGGTTCCGTGTTTCGTAT GTAGGTGGTCCCCTAGCTAGCGTAGTTCACGGGATGCAGAAAGTGGTGTT TTGCTGCCTGCGGCTAGGCTTTTTTTGTGTCGAGGCTATTAGATGTTTGG TGGATGGGTTTGTGTCCAACGGGCCGGCTGCGTGTATGCGCGTCCCCGGT TTGGTAGTGGCGTTGTTTGTTTTGTTTTTGCACGTAGGGGAGAGAGCATG CAGCTTGCTCTCTTCGCGGTGTTTCTTTCCGCTGTGTGGAAGGTGACGCT TCCAACGCGTTTTTAGAGGGAAGCCCGCCTGGTTAAGTTGGTAGGGAGTT GACGTATCACTCTGTAAATAAAGTATTTCCCAGGGATTGGAACAACGGCT TGGCCAGCGATCCGATGTTTGCTGCGGCCCGTGAACGAGAGTTCGTAGTA TGTGGAGGCTTTGACGGTGTCGAGGAGAGAGGAAAGTTAGGAGAATTGTA GAAACTCACAGCAGTGGTGTCATCCTTGCCGGAAGCGCCTCTTCGCGGGG GTTGCTCCGGGATGAAACGCTGATTTTTCTCTCGCTTTTGCCCTGTGAGG CTTATCCGGGGTATTACAAGAAGATTTGGCGACAACAGTGTGTGACTGAC GACAGTTTACATCCTCACGAAGGGAGAGCAACTGCTGCTTCACCTGTGGT GCACTGCTCTACATTTCATGACAATTTATGTGAGGGGGAAGAGCGGCTTA AGTGTCCCGTGCTTCACTTTGTAGAACTTTTGTGAGTGCTGTCTCAGCCG GCTTACTGTGCAGGGACGGCGGTGGTGTAGTACCAAGGTAGTACCCTAGT TTTACTTTTCGTCCGCGCGCTGCCGCCGACGCGTGTGCCATCTTTGCGGT AGCAGACATGAACGGAAGAGTGTTTCGTATCATATCGAAGTCGGCAAGCG CAATACTGGGTGGTGTGCGTGTGTAGAGGCTATATTTAACGTAACGGTGG GTATTTCGGCCCTAGCGTAGACGAGTGGGTGCATGTGGCAGGCGCTGGTG CGAGGGGGAGTCGCCCCAGTGCTAGATGATAGACGTGACGAACATCAATG TCGATTTTTATGGGTCCGCACG
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13921:468..3489-

>mRNA_E-fasciculatus_F_contig13921.2881.1 ID=mRNA_E-fasciculatus_F_contig13921.2881.1|Name=mRNA_E-fasciculatus_F_contig13921.2881.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2490bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13921:468..3489- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCCGTCGCGGTGGGCGGCGCCGCCGCCGCCGTTCCAGACGTGCCTCAG
GGACGTTCGGCCCGCGGACAAGCTGGGCGGTCGGGCCGGCAGCGGCGGTC
GCGCCTGCGGTGGGGGCAGTGGGGACGACGCGGCCGCTGCGGCGGCCGCC
AGCATGCTCGGACTCGGGGAGGGGGACGTCGTCGACGCGAAGAACTGGCT
TAGCTCGGGGTTCATCGACGTCGTCATGGCCAAGTTCGCCCGCACGTACA
CGAACGTCCACTTCATGCCGATCGACTTCGCCGTGCTGTGCCTGAACGGG
TGGGGCGCTCCGGACACGCCTCCTCCTGCGGCCGCCGCCGCCGCCGCCGC
TCCAGGCGGCGACGCCGGGGGCAGCAAGAGCGGCGGTAACGCGGGAGGCG
CCGAAGCCACGACGGCCGCCACCGCAGCCGATGCCGCCGCCGCCGCTATT
GCCGACCAGAGCATGGTCTTCAAGGACGTACTGGGCCGACCGATTGTGTA
CGCGGAGAAGCGGCCGGTGATCTTCCTGACCCACGTCAACAACGTCCACT
GGAACCTCCTCCGCGTGGAGCACGACCCCGTTCCCGAGCTGCAGCTGTTC
GAGCCGATGGGGAAGCCTCCGCGCCGGCAGGGGGGCTCGCGGTACACCCA
GCAGCAGGGGGGCGGTGGGGCCGGCGGTGGCAGTGGGCCCCCCGGCGGGC
GAAGCACCGGTTTCCGGTGCATCCCTAAAGAAATGCCGTCGCGGTGGGCG
GCGCCGCCGCCGCCGTTCCAGACGTGCCTCAGGGACGTTCGGCCCGCGGA
CAAGCTGGGCGGTCGGGCCGGCAGCGGCGGTCGCGCCTGCGGTGGGGGCA
GTGGGGACGACGCGGCCGCTGCGGCGGCCGCCAGCATGCTCGGACTCGGG
GAGGGGGACGTCGTCGACGCGAAGAACTGGCTTAGCTCGGGGTTCATCGA
CGTCGTCATGGCCAAGTTCGCCCGCACGTACACGAACGTCCACTTCATGC
CGATCGACTTCGCCGTGCTGTGCCTGAACGGGTGGGGCGCTCCGGACACG
CCTCCTCCTGCGGCCGCCGCCGCCGCCGCCGCTCCAGGCGGCGACGCCGG
GGGCAGCAAGAGCGGCGGTAACGCGGGAGGCGCCGAAGCCACGACGGCCG
CCACCGCAGCCGATGCCGCCGCCGCCGCTATTGCCGACCAGAGCATGGTC
TTCAAGGACGTACTGGGCCGACCGATTGTGTACGCGGAGAAGCGGCCGGT
GATCTTCCTGACCCACGTCAACAACGTCCACTGGAACCTCCTCCGCGTGG
AGCACGACCCCGTTCCCGAGCTGCAGCTGTTCGAGCCGATGGGGAAGCCT
CCGCGCCGGCAGGGGGGCTCGCGGTACACCCAGCAGCAGGGGGGCGGTGG
GGCCGGCGGTGGCAGTGGGCCCCCCGGCGGGCGAAGCACCGGTTTCCGGT
GCATCCCTAAAGAAGTATACCGTTGGCTGGACGCCGTGTGGCCGTTGCGA
TCCGGAGGGGAGACCCCCGGCGGGAGTTGCAGCAGCGGCAGCGGGGGTGC
GAAGAGGAAAACCCCCAGCCCTACGCCGTCGCACGACGGCTGGGCTTCGC
GCGCGTACTCGGCGATCACCCGGCAGCAGCAGACGACCGGGTTCGACTGC
GGCGTGGCCTCCCTGCTGTACGCGGAGAAGTGCGGGCAGGGGCAGATGCG
CGAGGACGTGGATGCGTGGACGACCCAGGCTGACATGACGGAGTACAGGC
GCGCGCTTCAGCGCTACGTTGAGGAGGTCCTGCGCCACGAAGAGCCTTCC
CCGCCATCGTCCGGCAGTCCACGGAGCCCCGGTGGCGCGGCGTCGCCTGA
GGTGGTGGTGGTTGACCCGCCGCCGTCACCGCTGCCGCTGCCGCCGTTGT
CCTCCGCCCCCCGTCCCCCCGCTGCTGCGGTACCGGTACCGGCGGCGACG
GCTTCGGCCCCGGTGGCGCTGTCGTAGGTATACCGTTGGCTGGACGCCGT
GTGGCCGTTGCGATCCGGAGGGGAGACCCCCGGCGGGAGTTGCAGCAGCG
GCAGCGGGGGTGCGAAGAGGAAAACCCCCAGCCCTACGCCGTCGCACGAC
GGCTGGGCTTCGCGCGCGTACTCGGCGATCACCCGGCAGCAGCAGACGAC
CGGGTTCGACTGCGGCGTGGCCTCCCTGCTGTACGCGGAGAAGTGCGGGC
AGGGGCAGATGCGCGAGGACGTGGATGCGTGGACGACCCAGGCTGACATG
ACGGAGTACAGGCGCGCGCTTCAGCGCTACGTTGAGGAGGTCCTGCGCCA
CGAAGAGCCTTCCCCGCCATCGTCCGGCAGTCCACGGAGCCCCGGTGGCG
CGGCGTCGCCTGAGGTGGTGGTGGTTGACCCGCCGCCGTCACCGCTGCCG
CTGCCGCCGTTGTCCTCCGCCCCCCGTCCCCCCGCTGCTGCGGTACCGGT
ACCGGCGGCGACGGCTTCGGCCCCGGTGGCGCTGTCGTAG
back to top