prot_E-fasciculatus_F_contig13920.2880.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13920.2880.1
Unique Nameprot_E-fasciculatus_F_contig13920.2880.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length219
Homology
BLAST of mRNA_E-fasciculatus_F_contig13920.2880.1 vs. uniprot
Match: A0A6H5L6J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6J2_9PHAE)

HSP 1 Score: 246 bits (629), Expect = 8.240e-75
Identity = 131/145 (90.34%), Postives = 131/145 (90.34%), Query Frame = 0
Query:    1 MVKSVQAVLGGTEEPGGLGEGFVEACLSVLGWSPQGVIEAVLEDRLPPQVAGLNRGLRRAWKSKKGDLDKAYRVDKDLAAAEAKRLIAMEKRQEDDAYLLSREYDDDXXXXXXX----REVDVGGGGGRGSDFETVRRVNQLVRQ 141
            MVKSVQAVLGGT EPGGLGEGFVEACLSVLGWSPQGVIEAVLEDRLPPQVA LNRGLRRAWK KKGDLDKAYRVDKDLAAAEAKRLIAMEKRQEDDAYLLSREYDDD           REVDVGGGGGRGSDFETVRRVNQLVRQ
Sbjct:  346 MVKSVQAVLGGTGEPGGLGEGFVEACLSVLGWSPQGVIEAVLEDRLPPQVANLNRGLRRAWKGKKGDLDKAYRVDKDLAAAEAKRLIAMEKRQEDDAYLLSREYDDDYDDQAWREYDDREVDVGGGGGRGSDFETVRRVNQLVRQ 490          
BLAST of mRNA_E-fasciculatus_F_contig13920.2880.1 vs. uniprot
Match: A0A7S2AVJ1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AVJ1_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 3.210e-11
Identity = 51/134 (38.06%), Postives = 77/134 (57.46%), Query Frame = 0
Query:   17 GLGEGFVEACLSVLGWSPQGVIEAVLEDRLPPQVAGLNRGLRRAWKSKKG--DLDKAYRV-----DKDLAAAEAKRLIA-MEKRQEDDAYLLSREYDDDXXXXXXXREVDVGGGGGRGSDFETVRRVNQLVRQE 142
            GLG GFVEA L    +S   V+ AVL+D LPPQ+ G++R L R   S+K   D+D  Y V     D D+   + ++LI  M++ +ED+A++LSREYDDD        +  V     + ++ E  RR+N ++R +
Sbjct:    1 GLGAGFVEAMLVFHDFSVARVVAAVLDDNLPPQLEGMDRKLGRYRVSRKDLKDIDAGYSVGSQARDDDVLREKQRQLIRNMDRDEEDNAWVLSREYDDDFDDQF---DNVVSFEVCKETEQENTRRMNSIIRDK 131          
BLAST of mRNA_E-fasciculatus_F_contig13920.2880.1 vs. uniprot
Match: A0A4D9DC10_9STRA (CUE domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DC10_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.550e-8
Identity = 50/131 (38.17%), Postives = 70/131 (53.44%), Query Frame = 0
Query:   17 GLGEGFVEACLSVLGWSPQGVIEAVLE-DRLPPQVAGLNRGLRRAWKS----KKGDLDKAYRVDKDLAAAEAKRLIAMEKRQEDDAYLLSREYDDDXXXXXXXREVDVGGGGGRGSDFETVRRVNQLVRQE 142
            GLGEGFV ACL+V+G++   V+ A+LE   LP  +  L+R L     +    KKG  +     D++  A +   L  MEK  E+DAYLL +EYDDD        +        R  DFE +R+ N L+R+E
Sbjct:  433 GLGEGFVHACLAVMGYNINMVVNALLEGSALPYPLDTLDRSLPSPLGADKLRKKGREEAEEARDEEFIARQKAYLRQMEKDAEEDAYLL-QEYDDDFDDQYAGEQTMFSRDTTR-EDFEAIRKYNNLMRKE 561          
BLAST of mRNA_E-fasciculatus_F_contig13920.2880.1 vs. uniprot
Match: A0A7S2BCH7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BCH7_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 1.060e-5
Identity = 46/132 (34.85%), Postives = 74/132 (56.06%), Query Frame = 0
Query:   18 LGEGFVEACLSVLGWSPQGVIEAVLEDRLPPQVAGLNRGLRR----AWKSKKGD--LDKAYRVDKDLAAAEAKRLIAMEKRQ-EDDAYLLSREYDDDXXXXXXXREVDVGGGGGRGSDFETVRRVNQLVRQE 142
            LGEGFVE CL+   +S + V+  +LED LPPQ+A ++R  +R      K ++G+  +    + D D A A+   L  ME+ + E +A+L++   D  XXXXXXX   ++G       D E  ++ N  +R++
Sbjct:    1 LGEGFVEVCLAFHDFSVETVVNKILEDDLPPQLADMDRTTKRFRVNMGKVERGNFTVGTTVKADDDFAQAQKAYLRQMEEEEHEKEAFLMAEYNDXXXXXXXXXNNFEIGHSD---RDLEATKKSNAAIREK 129          
BLAST of mRNA_E-fasciculatus_F_contig13920.2880.1 vs. uniprot
Match: A0A836CBT6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT6_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 1.300e-5
Identity = 24/35 (68.57%), Postives = 29/35 (82.86%), Query Frame = 0
Query:    1 MVKSVQAVLGGTEEPGGLGEGFVEACLSVLGWSPQ 35
            M+  VQ V GG E+ GG+GEGFVEACLS++GWSPQ
Sbjct:  737 MIAEVQEVFGGPEQEGGVGEGFVEACLSLMGWSPQ 771          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13920.2880.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L6J2_9PHAE8.240e-7590.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2AVJ1_9STRA3.210e-1138.06Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A4D9DC10_9STRA1.550e-838.17CUE domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7S2BCH7_9STRA1.060e-534.85Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A836CBT6_9STRA1.300e-568.57Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.8.10coord: 16..46
e-value: 4.3E-7
score: 31.5
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 18..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13920contigE-fasciculatus_F_contig13920:629..3485 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13920.2880.1mRNA_E-fasciculatus_F_contig13920.2880.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13920 611..3485 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13920.2880.1 ID=prot_E-fasciculatus_F_contig13920.2880.1|Name=mRNA_E-fasciculatus_F_contig13920.2880.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=219bp
MVKSVQAVLGGTEEPGGLGEGFVEACLSVLGWSPQGVIEAVLEDRLPPQV
AGLNRGLRRAWKSKKGDLDKAYRVDKDLAAAEAKRLIAMEKRQEDDAYLL
SREYDDDYDDQYDDREVDVGGGGGRGSDFETVRRVNQLVRQEEEEDAWWE
NNKNTNLSVAAPKGGGWRARSHREQEGGGEGEDNTQEQASSAGGGGGGGR
GRGGGRSGGRGGGPPPPGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009060UBA-like_sf