mRNA_E-fasciculatus_F_contig1392.2879.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1392.2879.1 vs. uniprot
Match: D8LQW0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQW0_ECTSI) HSP 1 Score: 982 bits (2539), Expect = 0.000e+0 Identity = 784/1081 (72.53%), Postives = 811/1081 (75.02%), Query Frame = 1
Query: 427 VAKSPSPLRYLSPARGQQKDEIFTFGRSSGSGG-NEGGKREMFYFGKSGGGGDVGDTTPGIPGPAQPAPSTPRVG-HRSRSTGADVEAAGHLPLDTKGAAFPTTPKVARGPDTPGYASTPCICSPPAPLHRGITGSGKPRTSSRQSIGVDCSGPSG-SGRPPXXXXXXXXXXXXXDDSGQGLAQGWAEGEEDFGRSGTTVAAA-AGAARRPARARRKCRLNQRKPKLADDDSGSCRESVTEADADGEGAETSG-LRGVSQSSGXXXXXXXXXXXXERSTNRKEQLLDASSSERFSEDFGDTRDGEGGGAEKRSGEWAGAGVEACPEERGVSRRXXXXXXPAVRRDEETLIDFKGRMAAIASATRLATXXXXXXXXXXRNAFVMATPPHPISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEGRCPLSGGGSSTTHEPDGSATLAVGTSSADAGNVVACGSSEAVSGASSSGSAWSTPERVGKRAEGAGTAAAV----AATAGLDGGGVTASPKTGGAGRSAAARPL-TTVKPSERTAPKTRPWPDFERIRYEPPESAITTPLRRSDWTVPHGSAMHALAAALDEAAGSTACSSPLDMRQEGRESVRRRYQERADHFRLIQAARETSAGKGSAMLLAMRQRRQAEEDALRAKREREARAAWIKERILMRMLEGRRAAFLAWAKHARVCRNARQMIKSRTDSLSLRVLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNARRRELALEKSALARSALSGLAGTRSRFARWRAWAGRRAAARRMALKAKEAWLQRCFLALAGNQLRLRHRLEERRVATLAAVFQGWRVGLGRLLRARLAPTQERGTLTAEDGTPGGXXXXXXXTPRDAIDGPPLYSSVGVEGWGFAPTMEEETEEAFSPTERERGSPYNGGGGVGGIADRCRGRGKRMEASSGVGEAVALDGDAVSPSDGGTTGAN-LLLPPSAFFASGNTTSIPSPQAEGIGAPVVAGAATETGGLSGAVGGGHAAAAEQGGARGSGRGASRHRKRRPRTGGDGSSRRAKSP 3636
VAK PSPLRYLSPAR QQKDE+F+FGRSS SGG NEGGKREMFYFGKSGGG + GDT+ PGP QP PSTPRVG HRSR TG D E HLP +T+GAAFP TPKVARGPDTPGYASTPCICSPPAPLHRGITGSGKPR SSR SIG+DCSGPSG SGRP XXXXXXXXXXXXX GQGLA WAEGEED RSGT AAA A AARRPARARRKCRLNQRKP LADD S SC S TEADADG+GAETSG LR SQSS ERSTNRKEQLL+ASSSERFSEDF R G+ GGA + G WAGAG EACP+ERGVSRRXXXXXXP VR+DEETLIDFKGRMAAIASATRL XXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ATA LDGG VTASPK GA +A RPL TT+KPSERTAPKTRPWPDFERIRYEPPESAITTPLRRSDW VPHGSAMHALAAALDEAAGSTACSSPLDMRQEGRESVRRRYQERADHFRLIQAARETSAGKGSAMLLAMRQRRQAEEDALRA REREARAAWIKERILM MLEGR+AAFLAWAKH R CRNARQ++K RTDSLSLRVLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EKSALARSALSGLAGTR RF RWRAWA RRAAARRMAL+A+EAWLQRCFLALAGNQLRLR RLE+RR+A LAAVFQGWRVGLGRLLRARLA T ERGTLTA+DG PGG TPRDAIDG LYSSVGVEGWGFAP EEE EAFSP E GSP NG G GKR EAS GVGEAVA DGDAVSPSDGG TGA LLLPPSAFFAS + + E +GA V A TG G GG +AA E GGARGS RGASRHRKRRPR GGDGSSRRAKSP
Sbjct: 4 VAKRPSPLRYLSPAREQQKDEVFSFGRSSSSGGGNEGGKREMFYFGKSGGG-NFGDTS-NTPGPGQPTPSTPRVGQHRSRPTGTDGE---HLPPETRGAAFPMTPKVARGPDTPGYASTPCICSPPAPLHRGITGSGKPRASSRLSIGIDCSGPSGGSGRPXXXXXXXXXXXXXX--GGQGLAPEWAEGEEDCDRSGTPAAAAVAAAARRPARARRKCRLNQRKPNLADD-SDSCGGSTTEADADGDGAETSGGLRDGSQSSAGSRAADSCRR--ERSTNRKEQLLNASSSERFSEDFCG-RGGQEGGAGQGLGAWAGAGAEACPKERGVSRRXXXXXXPVVRQDEETLIDFKGRMAAIASATRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVATARLDGG-VTASPKREGAAGRSAVRPLRTTLKPSERTAPKTRPWPDFERIRYEPPESAITTPLRRSDWKVPHGSAMHALAAALDEAAGSTACSSPLDMRQEGRESVRRRYQERADHFRLIQAARETSAGKGSAMLLAMRQRRQAEEDALRAAREREARAAWIKERILMHMLEGRKAAFLAWAKHTRACRNARQVVKWRTDSLSLRVLTAWRGEANRSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKSALARSALSGLAGTRGRFVRWRAWARRRAAARRMALRAREAWLQRCFLALAGNQLRLRQRLEDRRMAALAAVFQGWRVGLGRLLRARLASTSERGTLTADDGPPGGGGG----TPRDAIDGAHLYSSVGVEGWGFAPAREEEKTEAFSPGEGGAGSPDNG--------XXXAGLGKRSEAS-GVGEAVAFDGDAVSPSDGGATGARVLLLPPSAFFASETLVATKAVVEEEVGASVEA---AGTGRWPG--GGDGSAAVEDGGARGSRRGASRHRKRRPRKGGDGSSRRAKSP 1054 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1392.2879.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1392.2879.1 >prot_E-fasciculatus_F_contig1392.2879.1 ID=prot_E-fasciculatus_F_contig1392.2879.1|Name=mRNA_E-fasciculatus_F_contig1392.2879.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=1163bp MESPPAPVRTGRPSKPRRAAAAAAAAAAGGGARVPPLGCSSGGSGGGGAPback to top mRNA from alignment at E-fasciculatus_F_contig1392:8943..18304- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1392.2879.1 ID=mRNA_E-fasciculatus_F_contig1392.2879.1|Name=mRNA_E-fasciculatus_F_contig1392.2879.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=9362bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1392:8943..18304- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1392:8943..18304- >mRNA_E-fasciculatus_F_contig1392.2879.1 ID=mRNA_E-fasciculatus_F_contig1392.2879.1|Name=mRNA_E-fasciculatus_F_contig1392.2879.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=6978bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1392:8943..18304- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |