mRNA_E-fasciculatus_F_contig1392.2878.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1392.2878.1
Unique NamemRNA_E-fasciculatus_F_contig1392.2878.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1392.2878.1 vs. uniprot
Match: A0A6H5JED9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JED9_9PHAE)

HSP 1 Score: 429 bits (1102), Expect = 1.800e-145
Identity = 229/248 (92.34%), Postives = 233/248 (93.95%), Query Frame = 1 
Query:    1 MIPRVLGLIACGACTASAFVAPCVLRSQQHGGDTTSRHSSRSSSVGHRRQAMSMGGEPQSRRDVIAGKDDTGEEQDLSVAAAVGVTTLVSASVPDEAAAFGPIKMELTEPEYASVVCPPKTQVPGEKAGAGLKPVCVKVTVTANNPSPKEVVDAAVFGFVFDEDSTSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPDEDFSLKKLKFKSLKAISYAGGQQYGAITECEMNPLAAECDFD 744
            MIPRVLG I CGAC ASAFVAP VLRSQQ  GDT SR+SSRSSSVGHRR+AMSMGGEPQSRR+VIAGK   G+    SVAAAVGVTTL SASVPDEAAAFGPIKMELTEPEYASVVCPPKTQVPGEKAGAGLKPVCVKVTVTANNPSPKEVVDAAVFGFVFDEDSTSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPDEDFSLKKLKFKSLKAISYAGGQQYGAITECEMNPLAAECDFD
Sbjct:    1 MIPRVLGFIVCGACAASAFVAPSVLRSQQQHGDTPSRYSSRSSSVGHRREAMSMGGEPQSRRNVIAGKG-VGK----SVAAAVGVTTLASASVPDEAAAFGPIKMELTEPEYASVVCPPKTQVPGEKAGAGLKPVCVKVTVTANNPSPKEVVDAAVFGFVFDEDSTSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPDEDFSLKKLKFKSLKAISYAGGQQYGAITECEMNPLAAECDFD 243
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BLAST of mRNA_E-fasciculatus_F_contig1392.2878.1 vs. uniprot
Match: A0A835YQZ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQZ7_9STRA)

HSP 1 Score: 207 bits (528), Expect = 1.280e-59
Identity = 106/169 (62.72%), Postives = 128/169 (75.74%), Query Frame = 1 
Query:  235 VAAAVGVTTLVSASVPDEAAAFGPIKMELTEPEYASVVCPPKTQVPGEKAGAGLKPVCVKVTVTANNPSPKEVVDAAVFGFVFDEDSTSVVANNPDGASDAGQFAIIDKI-PKGSSRVSFQFVAAIEPDEDFSLKKLKFKSLKAISYAGGQQYGAITECEMNPLAAECD 738
            VAAA+ +TT VS      A A GP+K+ LT P YA V CPP TQVPG+KAGAGL+PVC+KV   A+NP+ K++ + A+FG VFDED TSVVANNPDG +DAGQFA+I+ + P G S++ FQFVAAI P E+ S K L F S+KAISY G  +YGAITECEMNPLA ECD
Sbjct:   62 VAAALALTTAVS-----PADAIGPVKIALTNPTYAEVTCPPNTQVPGQKAGAGLRPVCIKVKADADNPAKKDLENPAIFGRVFDEDGTSVVANNPDGGTDAGQFAMIEGVVPPGKSKIEFQFVAAIGPKEELSKKTLTFPSIKAISYPGAGRYGAITECEMNPLADECD 225
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BLAST of mRNA_E-fasciculatus_F_contig1392.2878.1 vs. uniprot
Match: A0A7S2SGY2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGY2_9STRA)

HSP 1 Score: 147 bits (370), Expect = 1.860e-36
Identity = 83/190 (43.68%), Postives = 113/190 (59.47%), Query Frame = 1 
Query:  190 VIAGKDDTGEEQDLSVAAAVGVTTLVSASVPDEAAAFGPIKMELTEPEYASVVCPPKTQ---VPGEKAGAGLKPV---CVKVTVTANNPSPKEVVDAAVFGFVFDE-DSTSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPDEDFSLKKLKFKSLKAISYAGGQQYGAITECEMNPLAAECD 738
            + A +DD G    +    A    TL  A     A A GP+ MEL++ EY +V CPP  +   + G   G+  + V   CVKVT +  NP+ K +VD AVFGFV D     SV+ANNPD  SDAGQFA ID++P G  RVSF FVA +  + +  L  L+F+S+KAISY GG ++  ++ CE++ LA EC+
Sbjct:   68 ISATEDDVGRRDAIKSTLAAAAATLALAG--PRAEAVGPVNMELSDVEYEAVECPPSLKAGRIGGAFGGSASRQVLQQCVKVTCSVTNPTKKSLVDTAVFGFVLDPITGASVIANNPDLRSDAGQFASIDEVPPGDQRVSFIFVATLGKESEGKLPPLEFRSIKAISYPGGARFAELSPCELDSLAPECE 255
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BLAST of mRNA_E-fasciculatus_F_contig1392.2878.1 vs. uniprot
Match: A0A7S4D819_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D819_HETAK)

HSP 1 Score: 145 bits (366), Expect = 4.010e-36
Identity = 80/169 (47.34%), Postives = 104/169 (61.54%), Query Frame = 1 
Query:  241 AAVGVTTLVSASVPDEAAAFGPIKMELTEPEYASVVCPPKTQVPGE---KAGAGLKPVCVKVTVTANNPSPKEVVDAAVFGFVFDEDSTSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPDEDFSLKKLKFKSLKAISYAGGQQYGAITECEMNPLAAECD 738
            AA G+ +  +      A+A GP+KM LT   Y +V C  K    G    K+ AGL   CV+VT    NP  K ++DA+VFGFVFD   +SVV NNPD  SDAGQFAII KI  G S + F+ VAA+ P E   + +L+F+S+KAISY GG +Y AI++C+ NP    CD
Sbjct:   81 AAFGLASAFTTGAAPMASAIGPVKMPLTNIAYQAVDCKGKELSGGSFTSKSTAGLVSYCVEVTADVFNPEKKTIIDASVFGFVFDNTGSSVVLNNPDARSDAGQFAIIPKIVPGKSNIKFEMVAAV-PSERGDVGELRFESIKAISYPGGDRYKAISDCDFNPSGDGCD 248
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BLAST of mRNA_E-fasciculatus_F_contig1392.2878.1 vs. uniprot
Match: K0THP2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0THP2_THAOC)

HSP 1 Score: 144 bits (362), Expect = 2.220e-35
Identity = 76/176 (43.18%), Postives = 112/176 (63.64%), Query Frame = 1 
Query:  232 SVAAAVGVTTLVS-ASVPDEAAAFGPIKMELTEPEYASVVCPPKTQVPGEKAGAGLKPVCVKVTVTANNPSPKEVVDAAVFGFVFDEDST-SVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPDEDFS-----LKKLKFKSLKAISYAGGQQYGAITECEMNPLAAECD 738
            S+A+  GV  + S  SV   A A GPIK+++  P Y +  CP    +PGEKA  G++ +CV+V       SPK++    ++G+V D +ST SV+ANNPD  +DAGQFAII +I     ++ F+F+AA+  ++D S     +  L FKSL+ +S+ GGQQYGAI+ CEMN  ++EC+
Sbjct:   69 SIASLPGVGLIDSNLSVGGTAEAIGPIKIDIINPSYVAAPCPKDKPIPGEKAMKGMRGLCVQVKAELAENSPKDLEKVGIYGYVDDAESTESVLANNPDSGTDAGQFAIIPEIKTTDKKIEFEFIAAVPMEKDISKYEDGIGPLSFKSLRIVSFPGGQQYGAISPCEMNEFSSECE 244
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BLAST of mRNA_E-fasciculatus_F_contig1392.2878.1 vs. uniprot
Match: A0A1Z5J9N6_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J9N6_FISSO)

HSP 1 Score: 142 bits (359), Expect = 3.100e-35
Identity = 68/159 (42.77%), Postives = 102/159 (64.15%), Query Frame = 1 
Query:  280 PDEAAAFGPIKMELTEPEYASVVCPPKTQVPGEKAGAGLKPVCVKVTVTANNPSPKEVVDAAVFGFVFDEDS-TSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPDEDFS-----LKKLKFKSLKAISYAGGQQYGAITECEMNPLAAECD 738
            P  A A GP+++ LT   Y +  CPP   +PG+KA  G++ +CV V  T N+P PKE+    V+GF+ D D+  SV+ANNPD ++DAGQFAI++K+      + F+F+AA+  ++D +     +  L F+SL+ +S+ GGQQYG I  CEMN  + EC+
Sbjct:   62 PQSAHAIGPVRVSLTPTSYIARTCPPNKPIPGQKAMQGMRGLCVTVQATLNDPVPKELEKVGVYGFITDGDTGDSVLANNPDLSTDAGQFAIVEKVKTTDKTIEFEFIAAVPREKDLTQYDNGIGPLHFESLRLVSFPGGQQYGEINPCEMNEFSIECE 220
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BLAST of mRNA_E-fasciculatus_F_contig1392.2878.1 vs. uniprot
Match: A0A7S1DBN0_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DBN0_CYCTE)

HSP 1 Score: 142 bits (359), Expect = 3.740e-35
Identity = 77/174 (44.25%), Postives = 109/174 (62.64%), Query Frame = 1 
Query:  235 VAAAVGVTTLVSASVPDEAAAFGPIKMELTEPEYASVVCPPKTQVPGEKAGAGLKPVCVKVTVTANNPSPKEVVDAAVFGFVFDEDS-TSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPDEDFS-----LKKLKFKSLKAISYAGGQQYGAITECEMNPLAAECD 738
            VAA VG  T +  S  D A A GPIK+ L  P Y++  CPP   +PGEKA  G++ +CV V       +PK++    V+GFV D D+  SV+ANNPD ++DAGQFA+++ +     +V+F FVAA+  ++D S     +  L F SL+ IS+ GGQQYGAI+ CEM+  + EC+
Sbjct:   56 VAAVVGAATTLLPS--DPAQAVGPIKVALVNPVYSAQPCPPNRPIPGEKAMKGMRGLCVTVQADLETETPKDLDKVGVYGFVTDSDTGESVLANNPDLSTDAGQFAMVESVTTSDKKVTFDFVAAVPREKDISQYENGIGPLTFGSLRVISFPGGQQYGAISPCEMDEFSMECE 227
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BLAST of mRNA_E-fasciculatus_F_contig1392.2878.1 vs. uniprot
Match: B8BWP2_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWP2_THAPS)

HSP 1 Score: 137 bits (346), Expect = 4.060e-33
Identity = 68/154 (44.16%), Postives = 98/154 (63.64%), Query Frame = 1 
Query:  295 AFGPIKMELTEPEYASVVCPPKTQVPGEKAGAGLKPVCVKVTVTANNPSPKEVVDAAVFGFVFD-EDSTSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPDEDFS-----LKKLKFKSLKAISYAGGQQYGAITECEMNPLAAECD 738
            A GPIK+ +  P Y +  CPP   +PGEKA  G++ +CV+VT       PKE+    V+G+V D E S SV+ANNPD  +DAGQF +I+ +     +V F+F+AA+  ++D +     +  L+FKSL+ IS+ GGQQ+GAI  CEMN  + EC+
Sbjct:   94 AVGPIKINILNPTYTAAPCPPSKPIPGEKAMKGMRGLCVQVTAELEELPPKELEKVGVYGYVNDAETSESVLANNPDSGTDAGQFGMIESVGIKDKKVEFEFIAAVPMEKDVTSYENGIGPLEFKSLRIISFPGGQQFGAINPCEMNEFSEECE 247
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BLAST of mRNA_E-fasciculatus_F_contig1392.2878.1 vs. uniprot
Match: A0A7S2KRJ0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KRJ0_9STRA)

HSP 1 Score: 134 bits (338), Expect = 1.770e-32
Identity = 72/176 (40.91%), Postives = 111/176 (63.07%), Query Frame = 1 
Query:  229 LSVAAAVGVTTLVSASVPDEAAAFGPIKMELTEPEYASVVCPPKTQVPGEKAGAGLKPVCVKVTVTANNPSPKEVVDAAVFGFVFDE-DSTSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPDEDFSLKK-----LKFKSLKAISYAGGQQYGAITECEMNPLAAECD 738
            ++ AAA+ + T  + ++   A+A GP+K+ L   +Y + +CPP   +PGEKA  G++ +CV V       +PK++    V+GFV D   S SV+ANNPD ++DAGQF++I+ +      V F+FVAA+  ++D S ++     L F+SL+ IS+ GGQQYGAI  CEMN  + EC+
Sbjct:   31 IASAAALALGTTSTLNI-QPASAIGPVKVPLEVLDYKAEICPPSKPIPGEKAMKGMRGLCVTVQAKLTENAPKDLEKVGVYGFVTDAVTSDSVLANNPDKSTDAGQFSMIESVTTKDKLVEFEFVAAVPMEKDVSKEENGIGPLSFESLRIISFPGGQQYGAINPCEMNEFSDECE 205
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BLAST of mRNA_E-fasciculatus_F_contig1392.2878.1 vs. uniprot
Match: A0A6V2NP08_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2NP08_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.800e-32
Identity = 75/176 (42.61%), Postives = 102/176 (57.95%), Query Frame = 1 
Query:  229 LSVAAAVGVTTLVSASVPDEAAAFGPIKMELTEPEYASVVCPPKTQVPGEKAGAGLKPVCVKVTVTANNPSPKEVVDAAVFGFVFDE-DSTSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPDEDFS-----LKKLKFKSLKAISYAGGQQYGAITECEMNPLAAECD 738
            L    A  V T   A  P EA   GP+K+ LT P Y +  CPP   +PGEKA  G+K +CV V        PK++    V+GFV D     SV+ANNPD ++DAGQFA+I+ +     +V F+ +AAI  ++D +     +  L F  L+ ISY GGQQYGAI+ CEMN  ++EC+
Sbjct:   57 LGTVTASNVATSYGAGGPAEA--VGPVKVTLTNPTYFAEPCPPSKPIPGEKAMKGMKGLCVTVKADLAESPPKDLEKVGVYGFVTDGVTGDSVLANNPDLSTDAGQFAMIESVTTNDRKVEFELIAAIPREKDVTQFENGIGPLNFDGLRIISYPGGQQYGAISPCEMNEFSSECE 230
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1392.2878.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JED9_9PHAE1.800e-14592.34Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YQZ7_9STRA1.280e-5962.72Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2SGY2_9STRA1.860e-3643.68Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4D819_HETAK4.010e-3647.34Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
K0THP2_THAOC2.220e-3543.18Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A1Z5J9N6_FISSO3.100e-3542.77Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S1DBN0_CYCTE3.740e-3544.25Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
B8BWP2_THAPS4.060e-3344.16Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2KRJ0_9STRA1.770e-3240.91Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A6V2NP08_9STRA1.800e-3242.61Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1392contigE-fasciculatus_F_contig1392:3547..8693 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score424.1
Seed ortholog evalue4.5e-116
Seed eggNOG ortholog2880.D8LQV9
EggNOG OGs2D3UH@1,2S515@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-07_001760.1
Exons6
Model size1769
Cds size747
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927883.8046477-CDS-E-fasciculatus_F_contig1392:3546..37771622927883.8046477-CDS-E-fasciculatus_F_contig1392:3546..3777Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1392 3547..3777 +
1695995737.1814682-CDS-E-fasciculatus_F_contig1392:3546..37771695995737.1814682-CDS-E-fasciculatus_F_contig1392:3546..3777Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1392 3547..3777 +
1622927883.8146925-CDS-E-fasciculatus_F_contig1392:4695..48301622927883.8146925-CDS-E-fasciculatus_F_contig1392:4695..4830Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1392 4696..4830 +
1695995737.193122-CDS-E-fasciculatus_F_contig1392:4695..48301695995737.193122-CDS-E-fasciculatus_F_contig1392:4695..4830Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1392 4696..4830 +
1622927883.8238053-CDS-E-fasciculatus_F_contig1392:5825..58731622927883.8238053-CDS-E-fasciculatus_F_contig1392:5825..5873Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1392 5826..5873 +
1695995737.2033272-CDS-E-fasciculatus_F_contig1392:5825..58731695995737.2033272-CDS-E-fasciculatus_F_contig1392:5825..5873Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1392 5826..5873 +
1622927883.8351083-CDS-E-fasciculatus_F_contig1392:6065..61941622927883.8351083-CDS-E-fasciculatus_F_contig1392:6065..6194Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1392 6066..6194 +
1695995737.213468-CDS-E-fasciculatus_F_contig1392:6065..61941695995737.213468-CDS-E-fasciculatus_F_contig1392:6065..6194Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1392 6066..6194 +
1622927883.845036-CDS-E-fasciculatus_F_contig1392:6559..66761622927883.845036-CDS-E-fasciculatus_F_contig1392:6559..6676Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1392 6560..6676 +
1695995737.22534-CDS-E-fasciculatus_F_contig1392:6559..66761695995737.22534-CDS-E-fasciculatus_F_contig1392:6559..6676Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1392 6560..6676 +
1622927883.8609266-CDS-E-fasciculatus_F_contig1392:7584..76711622927883.8609266-CDS-E-fasciculatus_F_contig1392:7584..7671Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1392 7585..7671 +
1695995737.2341301-CDS-E-fasciculatus_F_contig1392:7584..76711695995737.2341301-CDS-E-fasciculatus_F_contig1392:7584..7671Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1392 7585..7671 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927883.8703237-UTR-E-fasciculatus_F_contig1392:7671..86931622927883.8703237-UTR-E-fasciculatus_F_contig1392:7671..8693Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1392 7672..8693 +
1695995737.2422633-UTR-E-fasciculatus_F_contig1392:7671..86931695995737.2422633-UTR-E-fasciculatus_F_contig1392:7671..8693Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1392 7672..8693 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1392.2878.1prot_E-fasciculatus_F_contig1392.2878.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1392 3547..7671 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1392.2878.1

>prot_E-fasciculatus_F_contig1392.2878.1 ID=prot_E-fasciculatus_F_contig1392.2878.1|Name=mRNA_E-fasciculatus_F_contig1392.2878.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=249bp
MIPRVLGLIACGACTASAFVAPCVLRSQQHGGDTTSRHSSRSSSVGHRRQ
AMSMGGEPQSRRDVIAGKDDTGEEQDLSVAAAVGVTTLVSASVPDEAAAF
GPIKMELTEPEYASVVCPPKTQVPGEKAGAGLKPVCVKVTVTANNPSPKE
VVDAAVFGFVFDEDSTSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFV
AAIEPDEDFSLKKLKFKSLKAISYAGGQQYGAITECEMNPLAAECDFD*
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mRNA from alignment at E-fasciculatus_F_contig1392:3547..8693+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1392.2878.1 ID=mRNA_E-fasciculatus_F_contig1392.2878.1|Name=mRNA_E-fasciculatus_F_contig1392.2878.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5147bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1392:3547..8693+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGATTCCTCGTGTGCTTGGTTTGATTGCGTGTGGAGCCTGCACCGCTTC
TGCCTTCGTTGCACCCTGCGTGCTTCGATCACAGCAGCACGGCGGGGACA
CAACTTCACGACACAGCAGCCGAAGCAGCTCCGTGGGTCATCGCCGGCAG
GCGATGTCGATGGGAGGGGAGCCGCAGTCCCGCCGAGACGTCATTGCAGG
CAAGGATGATACGGGAGAGGAGCAAGATCTGGTTGTTTGCAACAAGCTTT
TCGGAGGTCGATGTTGTGTATCCAGTGTGCGCATGTTCGTCTGACTCCTT
CCGGCTCTGAAACGTTGAAAAACATGTGACGATGTGACGATAATGCCGTG
TACATAGACTACACACAGGATGTACCTCATCGCCAAGCATGCACACGATG
AGCACTACTGGCTGCAGTACGACAGACTTACGTTGTCGCGTGAGAGTTCG
TCTCCGTCGCTTCTGAATCTCAAACCGAATCAATCCGCTTGATTTTATCT
CACACAGCAGAGTACCTGCTGGTTTCGATGCCTCACCGTCGCTGCTGTTG
TTGTTGCTTGACTGGAAAGTCACAATGATCCCGGCAGCCATAGCTCCGGC
CCGGCCATTGGTGTCCTTGATAGGGCAGAATATCATTTCACGCTGCAGCT
TGGACCTCTTGCGAGCAGCTCGGGTGCCTGTGTCAGTACGCATGTAGCGG
GCCGCATGACAAGGAGTACTACTGTACTCTAGTCTACAGGTCGCAGGTCT
CCCGCGACTAGGGGGCTCAGTGCTCACAGCTACTAAGTAGTCAGGAGGTT
ATGTAGCGAGCCACACACCACCTCCCCCGAAGTGGTCTCTGAGCGCATTG
CATCACACGATCAAGTGCTGTTGTCGAACCGAAGAAAGAAAAAATGCACT
GGATTTCGATCTCCGCTCTGTCAGTCTACGTAAGGCGGCTTGTGCACATT
CCACCTATATCTCGGACGGGTGCAGTGTTTCTGTGTTTGTATTTTTTTTT
CCTAATGTTCCATGCGGCTGGTGGCAGCCTTCTAGTTCTCACATGCTCGG
GATGGCCCTGCACAAGAATCTCTCCCCGCTGTTGTGCCTTTCTCACCCAA
CCTTGAACCCGCCCGTCCATCACGTAACACGCCCACAGGGGTGGGAAAGT
CGGTGGCCGCTGCCGTCGGCGTGACGACGCTAGTGTCGGCCTCAGTCCCG
GACGAAGCTGCGGCCTTCGGGCCCATCAAGATGGAGCTCACGGAGCCGGA
GTACGCCTCGGTCGTGTGCCCGCCAAAAACACAGGTGAGTCTCCCCGATA
CCACCACATAAAATCGGCCCAACACTTCCTGCCCCGGCTTGAGGAGTCCA
TCAGGTGCCCAACTTCGGATGGTGCTCAAGACACGCGATTGGGTCTATCA
GGGGCAGGGCGCACCTGTTCTATTGATTGATGCGCGTTTCCTCAGAGTCG
CATTCTGTTCTTTTTCCATGCACCGAAGGATGCTCTAGACAACATTAATA
CGTTCGGCCTCCAAATGCACCTTGGTCTTGAAAGTTGTAGTTTATTTCTT
TCTCCGAACGGTCTTTGTTGGGGTAGATACCCAGCTTGCTATCATAGTTT
TTCCTGACTACAATTAAACCCATCGGGAAGAATCTCGATAATTCATCACA
GTTCCCGGTTCGTGTGTCGGTTCCGGGTTGTAATTTCGTCCTGACGTGTG
GCGTGTACCTTTGCGTCAAGAAACACGCCATTTCTCTTTGTCTCGAGCAT
TTGCTTTTTTTTTATTTAAGGCCCATGTGATGACTGCGGAGGTAGGACCC
AGGTTCTTAGTGACCCGAGTTGAACCTAGCGAGCGCCACCGCAAATTTCG
TGGAAATTCTGCACGAGTACATAGCCGTAGGTTGCTGGGAGGTTCCTCTT
GCTTACCACCTTGCGTACGGTGCCGAAGACAGTAGGTCCTGCGCTAAATG
CAGGCGGTGTCACGTCTACTCCCCTACTTCATCCGAGTCAACTAATCGAA
CGCCTGGAGACGTTGAGGGCAAGCGATACCGAGACCGAGAGAAGAGTCAA
AACATCAAGACGAGACAGAAAAAGAAGGAGGTGGAGGGAGAAAAGAGGGA
GCGGGTATGGAGGCGGGGCAGTAACTAAAAACAAACGCGGTGCATACACA
ACCCTCGTAAGTATTGACCCGGACGTGCGGCTCTGCATGCCCAATACAGT
ACCCGCGAGCTGCTCAGCGGGACACCCGTCATCCGTCCTCGGTTGTCTTG
GCGTGTCTTGGTGTTGCTGTTGTCGGCAGGTCCCTGGGGAAAAGGCGGGA
GCGGGACTTAAGCCAGTCTGCGTAAAGGTGAGATTGATCACGATGTGTTT
TATCGCATTTGTCGGGTTCCCGTTATAGCTTCCCCCGAGGTTCGTCGAGG
GTGGCTGCCACGGTCTGGTTGGAAGAATCAGTGTCATGCCATGTCTTGGT
GCCTACGAGACTGGTGCTGACGGCAGTAGCACTGGTTCCGGTTCGCACTT
TTTTTTTGTTCCTCTTCAGGTGACGGTTACGGCGAACAACCCGAGCCCGA
AGGAGGTGGTGGACGCGGCGGTGTTCGGGTTCGTGTTCGACGAGGACTCG
ACGTCGGTAGTGGCAAACAACCCCGATGGCGCATCTGACGCAGGCCAGGT
GAACAGTCGTTGGTCGCGTTGTTGTTGTCGTCATCGTCGTTGTTGTTTCT
TTTGTTGTCACGTTTGTTTTCGATGACCTTGTTGTTGTTGTAGCGGTGGG
CTTTTTTTTATCCGAAGGATGTCGTCGCCCCGTTTCACTGAAAAAAAATG
GCTAGTTTTAAATGCGCACAACTCACACATACGCATGGTTGCATTGGTCT
CTCTATTTCTGTTCAGGGCCCGCTTATCCTTTCCTGTCTTCATGAACATC
AGAACGCATTCATAGTTGTAAAAACACGTGTCCATGTTGGGTGGTGCTGT
CGTTTTTTCTTCATGGTTTTGCTTCTCCTTCGTGTCCTCGTCCGTTCACG
CGCGCCGCCGCAGTTCGCCATCATCGACAAGATTCCCAAGGGCAGCAGCC
GGGTCTCCTTCCAGTTCGTGGCGGCCATCGAGCCTGACGAGGACTTCAGC
CTGAAAAAGCTCAAGTTTAAGTCGTTGAAGGTATCTACATGCTGCACCCC
GTCTAGCCCTGCAAGCGTGTTCTGCCTTGCATATCTCGCCCACGCCTGTG
TTGCATGGTATCCTACATCACTGCAATAGCTGCCCTGCAAGCAACCTTCC
GCCATACATCTCATCTCTCGCGCACGCCTTTCGTTGCCTGACACGCTGTA
TTTCTGCTTTGTATAGTGGCCATTTTCTTGTCCAGTATTTGTGTGGTGCT
TGCTTACTGCTATAGCCGCCTTTTCTTGTGGTGTATGGTGGTAGATACGT
ACGGCCTGTTTTCCTTAACTCGTTCGTCGGACACACGCATCTATGTTTTT
TTCGGTAGTGCTTGCGGGAGGAACAACTCGGTCGTCGCTCATGCCGCAGC
ATTGTTCCGTTCGCTCCCGTTGGTGTCTTCGACGCAGTAGTCTACGCAAG
TATTTCTAGTCAAGCAAACACACTTGGACAAAAGTATACAATCGGCTACA
TTGGGGTTTGGGTTAGGGTCTGTGTCCCCCCTGCCTGGTCTTTTTTCATA
ACAGACTGACTTCTTTGCGTGGACAGCCGTTTGGCGTCGAACTGCACTCA
TACTCCCCTCACCGTACCATATATGTGCGTTGCGAGTATCCCTACTCTAC
ACGCTGGCTTTGTCCACGACACGCAAGGAAGGCTGAGGCCAGCTTCTGGT
TCATCCTTATGAAACGTAGCCTTTGGTTCGTCGCTCCGCCCCAGCATTGT
AGGGATGCGAGGCAAATGGTCTAACGACTACGGCATGCGTTTGCTTGAGC
ACACCCCTCCCGACCCGCTGGTTTCATTGCTTGGACGCCTACACCGTACA
GACGATACACCTCTCCACCGGCTGTTGCTTTTGTCTCCCTCTCTCGTGCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCTCTCAGGCAATTTCGTAC
GCGGGGGGACAGCAGTACGGAGCGATCACGGAGTGCGAGATGAACCCTCT
GGCAGCAGAGTGCGACTTCGACTAAAAGCCCAGCCGACGTTTTGTCCGTT
TCAAAAGGGGTCGAAGTATCATCGCACATCTCATCTACAGCACGGTAGAT
CATGGATGAGCGTAGAATAGATCGGAGGTTACAGACTAGAGCTTTGGATG
GCTAGTTAGAGGATAATGGGGATATGGGTAGAGTTTGGTCCCCGCTGGTG
TAGGTACGATGTTGAAGATATTGTTGTTACCGCTGGACCACTACCGACCG
GGGGATGCTACCCCCCTTGAGTGATGTCGTTGCTACGGAGCCCGGCGTGT
TGCACAATGCAGCGTTAGCTTTTTTGTTTTCAGGTGCGTGATTTTCACGT
TTGAGACAGCCAAGACGGCCAGAAAGAACCTCAGGAGCAGCGCTAGCGGA
TGTACTACTTGCCATGTGCACGGGAAGATTGGGTGACTGCTGAACGAAAA
CACACGATGTGATACCGGTGGGCCGTTCCCCCAGGCATTTCTTTTCGCCC
TGCTTTTCTCTTGCCGTGTCACCCTCTTCTTGCGCGTAAGTATCGCGCTG
GAGCTTGGTTAACCTTTGCAGGTCTGATCGAACGGAGGGGAGAGTAAGAA
AATTGAGGCGAGAGGGGCAGTGATATGGGAAATGACGCCCACAACTAATT
GTGGCTTATGTTAGGCGCAAGAGCCTCACAAAATCTCTCGGTATTTTTCC
CACTCGTTGTTTTTAGCTGGCTTTGCGTCCTACTACTGCGTCTAGGTTAT
TCGGTTCGGTCGTTGCGTCATTGATGGTGCAATCAGCACGCGGTGCAGCA
CTGTATTGGGTGCGAGACGAGGTCGTTCTAGAGGTTCGTTCTTCTCACAC
ATCTAACGCAGCTTTCTCCGCGTGCGTACACGTGGGAGACTGGCCTGTCT
TGACACCCGTCATGATGAGCAACCGCGTTCCCCAAAGCGGAGAGTAGGGA
AGAGGCCAAGAACCATTGGACGCTTACAGAACTCGCTCCAAAATAAACTC
GAAATTGGGAGGAGCAAGACCAACATATCTTAAGATTGTCGATTTAC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1392:3547..8693+

>mRNA_E-fasciculatus_F_contig1392.2878.1 ID=mRNA_E-fasciculatus_F_contig1392.2878.1|Name=mRNA_E-fasciculatus_F_contig1392.2878.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1494bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1392:3547..8693+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGATTCCTCGTGTGCTTGGTTTGATTGCGTGTGGAGCCTGCACCGCTTC
TGCCTTCGTTGCACCCTGCGTGCTTCGATCACAGCAGCACGGCGGGGACA
CAACTTCACGACACAGCAGCCGAAGCAGCTCCGTGGGTCATCGCCGGCAG
GCGATGTCGATGGGAGGGGAGCCGCAGTCCCGCCGAGACGTCATTGCAGG
CAAGGATGATACGGGAGAGGAGCAAGATCTGATGATTCCTCGTGTGCTTG
GTTTGATTGCGTGTGGAGCCTGCACCGCTTCTGCCTTCGTTGCACCCTGC
GTGCTTCGATCACAGCAGCACGGCGGGGACACAACTTCACGACACAGCAG
CCGAAGCAGCTCCGTGGGTCATCGCCGGCAGGCGATGTCGATGGGAGGGG
AGCCGCAGTCCCGCCGAGACGTCATTGCAGGCAAGGATGATACGGGAGAG
GAGCAAGATCTGTCGGTGGCCGCTGCCGTCGGCGTGACGACGCTAGTGTC
GGCCTCAGTCCCGGACGAAGCTGCGGCCTTCGGGCCCATCAAGATGGAGC
TCACGGAGCCGGAGTACGCCTCGGTCGTGTGCCCGCCAAAAACACAGTCG
GTGGCCGCTGCCGTCGGCGTGACGACGCTAGTGTCGGCCTCAGTCCCGGA
CGAAGCTGCGGCCTTCGGGCCCATCAAGATGGAGCTCACGGAGCCGGAGT
ACGCCTCGGTCGTGTGCCCGCCAAAAACACAGGTCCCTGGGGAAAAGGCG
GGAGCGGGACTTAAGCCAGTCTGCGTAAAGGTCCCTGGGGAAAAGGCGGG
AGCGGGACTTAAGCCAGTCTGCGTAAAGGTGACGGTTACGGCGAACAACC
CGAGCCCGAAGGAGGTGGTGGACGCGGCGGTGTTCGGGTTCGTGTTCGAC
GAGGACTCGACGTCGGTAGTGGCAAACAACCCCGATGGCGCATCTGACGC
AGGCCAGGTGACGGTTACGGCGAACAACCCGAGCCCGAAGGAGGTGGTGG
ACGCGGCGGTGTTCGGGTTCGTGTTCGACGAGGACTCGACGTCGGTAGTG
GCAAACAACCCCGATGGCGCATCTGACGCAGGCCAGTTCGCCATCATCGA
CAAGATTCCCAAGGGCAGCAGCCGGGTCTCCTTCCAGTTCGTGGCGGCCA
TCGAGCCTGACGAGGACTTCAGCCTGAAAAAGCTCAAGTTTAAGTCGTTG
AAGTTCGCCATCATCGACAAGATTCCCAAGGGCAGCAGCCGGGTCTCCTT
CCAGTTCGTGGCGGCCATCGAGCCTGACGAGGACTTCAGCCTGAAAAAGC
TCAAGTTTAAGTCGTTGAAGGCAATTTCGTACGCGGGGGGACAGCAGTAC
GGAGCGATCACGGAGTGCGAGATGAACCCTCTGGCAGCAGAGTGCGACTT
CGACTAAGCAATTTCGTACGCGGGGGGACAGCAGTACGGAGCGATCACGG
AGTGCGAGATGAACCCTCTGGCAGCAGAGTGCGACTTCGACTAA
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