prot_E-fasciculatus_F_contig13914.2872.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13914.2872.1
Unique Nameprot_E-fasciculatus_F_contig13914.2872.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length308
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13914.2872.1 vs. uniprot
Match: D7FQ28_ECTSI (Similar to calcyphosine-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ28_ECTSI)

HSP 1 Score: 521 bits (1341), Expect = 4.150e-181
Identity = 276/304 (90.79%), Postives = 284/304 (93.42%), Query Frame = 0 
Query:    1 NANFDFARYACLVTDRQILGMANVSLVSWLALLVFRWVSYGLQVGLSRNDDTVSFRAWFVFGIVLCLLELSLLFACMLGVRRVCIKLGADPQDPVKTVDAVLERIWVAPMTHVQHAASMHGIGMPALNEGSMSDTPGNS---RADQVAVVHGSEGGGGLEAGGSAVGSTMANFAEEMPTRRTDIPEITMRDAFILPIGNAYKRAVEILMLLNSYYLAFYAVYFISRASKSSTEWVWIIVLPLPILAGVLMAYRRVLPLIALLSTIVMMQPTDVADVEQEAEELNKLRRKLVMRVEDVLEQEFKA 301
            NANFDFARYACLVTDRQILGMANVSL SWLALLVFRWVSYGLQVGLSR+  TVSFRAWFVFGIVLCLLELSLLFACMLGVRRVCIKLGADPQDPVKTVDAVLERIWVAPMTHVQHAASMHGIG  AL EG+ SDTPGNS    ADQ A+VHGSEGGGGLEAG SA+ STM +FAEEMP R  +IPEITMRDAF+LPIG AYK+AVEILMLLNSYYLAFYAVYFISRASKS TEWVWIIVLPLPILAGVLMAYRRVLPLIALLSTIVMMQPTDVADVEQEAEELNKLRRKLVMRVEDVLEQEFKA
Sbjct:  126 NANFDFARYACLVTDRQILGMANVSLASWLALLVFRWVSYGLQVGLSRDGGTVSFRAWFVFGIVLCLLELSLLFACMLGVRRVCIKLGADPQDPVKTVDAVLERIWVAPMTHVQHAASMHGIGRSALGEGATSDTPGNSCAVDADQAAMVHGSEGGGGLEAGRSAIRSTMPDFAEEMPMRGANIPEITMRDAFVLPIGKAYKQAVEILMLLNSYYLAFYAVYFISRASKSETEWVWIIVLPLPILAGVLMAYRRVLPLIALLSTIVMMQPTDVADVEQEAEELNKLRRKLVMRVEDVLEQEFKA 429
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BLAST of mRNA_E-fasciculatus_F_contig13914.2872.1 vs. uniprot
Match: A0A6H5JCN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCN8_9PHAE)

HSP 1 Score: 519 bits (1337), Expect = 1.090e-180
Identity = 276/307 (89.90%), Postives = 286/307 (93.16%), Query Frame = 0 
Query:    1 NANFDFARYACLVTDRQILGMANVSLVSWLALLVFRWVSYGLQVGLSRNDDTVSFRAWFVFGIVLCLLELSLLFACMLGVRRVCIKLGADPQDPVKTVDAVLERIWVAPMTHVQHAASMHGIGMPALNEGSMSDTPGNS---RADQVAVVHGSEGGGGLEAGGSAVGSTMANFAEEMPTRRTDIPEITMRDAFILPIGNAYKRAVEILMLLNSYYLAFYAVYFISRASKSSTEWVWIIVLPLPILAGVLMAYRRVLPLIALLSTIVMMQPTDVADVEQEAEELNKLRRKLVMRVEDVLEQEFKASSR 304
            NANFDFARYAC+VTDRQILGMANVSLVSWLALLVFRWVSYGLQVGLSR+  TVSFRAWFVFGIVLCLLELSLLFACMLGVRRVCIKLGADPQDPVKTVDAVLERIWVAPMTHVQHAASMHGI  PAL+EG+ +DTP NS    ADQ AVVHGSEG GGLEAGGSAV STM +FA EMP R  +IPEITMRDAF+LPIG AYK+A+EILMLLNSYYLAFYAVYFISRASKS TEWVWIIVLPLPILAGVLMAYRRVLPLIALLSTIVMMQPTDVADVEQEAEELNKLRRKLVMRVEDVLEQEFKAS R
Sbjct:  251 NANFDFARYACMVTDRQILGMANVSLVSWLALLVFRWVSYGLQVGLSRDGGTVSFRAWFVFGIVLCLLELSLLFACMLGVRRVCIKLGADPQDPVKTVDAVLERIWVAPMTHVQHAASMHGIVRPALDEGATADTPRNSCAVDADQAAVVHGSEGSGGLEAGGSAVRSTMPDFAVEMPVRGANIPEITMRDAFVLPIGKAYKQAIEILMLLNSYYLAFYAVYFISRASKSDTEWVWIIVLPLPILAGVLMAYRRVLPLIALLSTIVMMQPTDVADVEQEAEELNKLRRKLVMRVEDVLEQEFKASLR 557
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13914.2872.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQ28_ECTSI4.150e-18190.79Similar to calcyphosine-like protein n=1 Tax=Ectoc... [more]
A0A6H5JCN8_9PHAE1.090e-18089.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 270..297
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 18..38
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..80
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 39..57
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 231..249
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 81..200
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 201..219
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 250..307
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 220..230
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..17
NoneNo IPR availableTMHMMTMhelixcoord: 58..80
NoneNo IPR availableTMHMMTMhelixcoord: 231..253
NoneNo IPR availableTMHMMTMhelixcoord: 19..38
NoneNo IPR availableTMHMMTMhelixcoord: 204..221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13914contigE-fasciculatus_F_contig13914:201..2231 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13914.2872.1mRNA_E-fasciculatus_F_contig13914.2872.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13914 201..2231 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13914.2872.1 ID=prot_E-fasciculatus_F_contig13914.2872.1|Name=mRNA_E-fasciculatus_F_contig13914.2872.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=308bp
NANFDFARYACLVTDRQILGMANVSLVSWLALLVFRWVSYGLQVGLSRND
DTVSFRAWFVFGIVLCLLELSLLFACMLGVRRVCIKLGADPQDPVKTVDA
VLERIWVAPMTHVQHAASMHGIGMPALNEGSMSDTPGNSRADQVAVVHGS
EGGGGLEAGGSAVGSTMANFAEEMPTRRTDIPEITMRDAFILPIGNAYKR
AVEILMLLNSYYLAFYAVYFISRASKSSTEWVWIIVLPLPILAGVLMAYR
RVLPLIALLSTIVMMQPTDVADVEQEAEELNKLRRKLVMRVEDVLEQEFK
ASSRACT*
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