prot_E-fasciculatus_F_contig13907.2868.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13907.2868.1
Unique Nameprot_E-fasciculatus_F_contig13907.2868.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length257
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13907.2868.1 vs. uniprot
Match: D8LB08_ECTSI (Miro-related GTP-ase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB08_ECTSI)

HSP 1 Score: 423 bits (1087), Expect = 5.560e-140
Identity = 228/257 (88.72%), Postives = 239/257 (93.00%), Query Frame = 0 
Query:    1 QILGRLASEGGEAAEKFVQVQRGDSPGGFTEEGFLRLIQLFIDKKQMKAPWQAMSSHHYDEELVLVLPSEMTDPPPGKANAQDQVLSPLARKFLLQLFQQFSEEREGGDGPDASPLRLLAEEGQAKVFSVIPDPTCAPWDPPRSREXXXXXXXXXXXXXXXXXXXXVFAMPPFARLGRAPGAGRALTAEGWIAHWQMLALHSPVLLRSHLFYVGFGGHAEDMLVNKDSQVSYRTAAATETSPRRSGARGRQPSVMEV 257
            +ILGRLASEGGE  EKFVQ +RG +P GFTE GFLRLIQLFIDKKQMKAPWQAMSSHHYDEELVLV+PSEMTDPPPGKANAQDQVLSP A KFLL+LF+QFSEEREGGDG DASP RLLAEEGQAKVFSVIPDPTCAPWDPPRS    XXXXXXXXXXXXXXXXX VF+MPPFARLGRAPGAGRALTAEGWIAHWQMLALHSPVLLRSHLFYVGFGGHAE+MLV+K SQ++YR AA TETSPRRSGARGRQPSVMEV
Sbjct:  238 KILGRLASEGGEDVEKFVQEERGGNPKGFTEAGFLRLIQLFIDKKQMKAPWQAMSSHHYDEELVLVVPSEMTDPPPGKANAQDQVLSPQAHKFLLELFKQFSEEREGGDGLDASPPRLLAEEGQAKVFSVIPDPTCAPWDPPRSLGEEXXXXXXXXXXXXXXXXXAVFSMPPFARLGRAPGAGRALTAEGWIAHWQMLALHSPVLLRSHLFYVGFGGHAEEMLVDKSSQLTYRAAATTETSPRRSGARGRQPSVMEV 494
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BLAST of mRNA_E-fasciculatus_F_contig13907.2868.1 vs. uniprot
Match: A0A6H5JAM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAM1_9PHAE)

HSP 1 Score: 410 bits (1053), Expect = 5.850e-137
Identity = 223/257 (86.77%), Postives = 234/257 (91.05%), Query Frame = 0 
Query:    1 QILGRLASEGGEAAEKFVQVQRGDSPGGFTEEGFLRLIQLFIDKKQMKAPWQAMSSHHYDEELVLVLPSEMTDPPPGKANAQDQVLSPLARKFLLQLFQQFSEEREGGDGPDASPLRLLAEEGQAKVFSVIPDPTCAPWDPPRSREXXXXXXXXXXXXXXXXXXXXVFAMPPFARLGRAPGAGRALTAEGWIAHWQMLALHSPVLLRSHLFYVGFGGHAEDMLVNKDSQVSYRTAAATETSPRRSGARGRQPSVMEV 257
            +ILGRLASEGGE  EKFV+  RG  PG FTEEGFLRLIQLFIDKKQMKAPWQAMSSHHYDEELVLV+PSEMTDPPPGKANAQDQVLSP A KFLL+LF+QFSEEREGG   DASP RLL EEGQA+VFSVIPDPTCAPWDPPRSR    XXXXXXXXXXXXXXXX VF+MPPFARLGRAPGAGRALTAEGWIAHWQMLALHSPVLLRSHLFYVGF GHAE+MLV+K SQ++YR AA TETSPRRSGARGRQPSVMEV
Sbjct:  238 KILGRLASEGGEDVEKFVKEDRGGDPGRFTEEGFLRLIQLFIDKKQMKAPWQAMSSHHYDEELVLVVPSEMTDPPPGKANAQDQVLSPKAHKFLLELFKQFSEEREGGGVLDASPTRLLTEEGQAEVFSVIPDPTCAPWDPPRSR-GEEXXXXXXXXXXXXXXXXGVFSMPPFARLGRAPGAGRALTAEGWIAHWQMLALHSPVLLRSHLFYVGFKGHAEEMLVDKSSQLAYRAAATTETSPRRSGARGRQPSVMEV 493
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13907.2868.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LB08_ECTSI5.560e-14088.72Miro-related GTP-ase 1 n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JAM1_9PHAE5.850e-13786.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 74..257
e-value: 2.7E-13
score: 51.8
NoneNo IPR availableGENE3D1.10.238.10coord: 6..63
e-value: 2.7E-5
score: 26.3
IPR013567EF hand associated, type-2PFAMPF08356EF_assoc_2coord: 20..65
e-value: 2.1E-6
score: 27.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13907contigE-fasciculatus_F_contig13907:562..3197 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13907.2868.1mRNA_E-fasciculatus_F_contig13907.2868.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13907 562..3197 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13907.2868.1 ID=prot_E-fasciculatus_F_contig13907.2868.1|Name=mRNA_E-fasciculatus_F_contig13907.2868.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=257bp
QILGRLASEGGEAAEKFVQVQRGDSPGGFTEEGFLRLIQLFIDKKQMKAP
WQAMSSHHYDEELVLVLPSEMTDPPPGKANAQDQVLSPLARKFLLQLFQQ
FSEEREGGDGPDASPLRLLAEEGQAKVFSVIPDPTCAPWDPPRSREEEES
SEEEGQGQEAAGGGGGVFAMPPFARLGRAPGAGRALTAEGWIAHWQMLAL
HSPVLLRSHLFYVGFGGHAEDMLVNKDSQVSYRTAAATETSPRRSGARGR
QPSVMEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013567EF_hand_assoc_2