mRNA_E-fasciculatus_F_contig1390.2862.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1390.2862.1 vs. uniprot
Match: D7FHZ2_ECTSI (C2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHZ2_ECTSI) HSP 1 Score: 373 bits (957), Expect = 1.760e-119 Identity = 308/336 (91.67%), Postives = 313/336 (93.15%), Query Frame = 1
Query: 1 VWNDNAGDKKPSPDVLIGKGSLPVKHLASAAPAAPSHTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------QARREGDRTATDTDDDALSSLAGLSAWCTQGKRNHLSVQELGAVMSQTLEGFNIREELGKIEYAQGIINEGFGQRGAFADIQEEHLVGHPIYAPRGARKRLLALAELIRLQMRAEKEKVTAVEDIAEDGLPFGTTALERGYTTDGVSFFDTLAAMNYSLEEDRAKLELAKANELTTQQQDAPPQPKSPKPRSAAKEKV 990
VWNDNAGDKKPSPDVLIGKGSLPVKHLASA PAAP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QARREGDRTAT+TDDDALSS+AGLSAW QGKRNHLSVQELGAVMSQTLEGFNIREELGKIE+ QGIINEGFGQRGAFA IQEEHLVGHPIYAPRGARKRLLALAELIRLQMRAEKEKVTAVEDIAEDG PF + ALERGYTTDGV+FFDTLAAMNYSLEEDRAKLEL K NE TTQQQDAPPQPK PKPRSAAKEKV
Sbjct: 405 VWNDNAGDKKPSPDVLIGKGSLPVKHLASADPAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQARREGDRTATETDDDALSSIAGLSAWSIQGKRNHLSVQELGAVMSQTLEGFNIREELGKIEFVQGIINEGFGQRGAFAYIQEEHLVGHPIYAPRGARKRLLALAELIRLQMRAEKEKVTAVEDIAEDGSPFWSPALERGYTTDGVAFFDTLAAMNYSLEEDRAKLELTKTNEFTTQQQDAPPQPKPPKPRSAAKEKV 740 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1390.2862.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1390.2862.1 >prot_E-fasciculatus_F_contig1390.2862.1 ID=prot_E-fasciculatus_F_contig1390.2862.1|Name=mRNA_E-fasciculatus_F_contig1390.2862.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=353bp VWNDNAGDKKPSPDVLIGKGSLPVKHLASAAPAAPSHTAGGGGSGGKSSAback to top mRNA from alignment at E-fasciculatus_F_contig1390:1564..6890- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1390.2862.1 ID=mRNA_E-fasciculatus_F_contig1390.2862.1|Name=mRNA_E-fasciculatus_F_contig1390.2862.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5327bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1390:1564..6890- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1390:1564..6890- >mRNA_E-fasciculatus_F_contig1390.2862.1 ID=mRNA_E-fasciculatus_F_contig1390.2862.1|Name=mRNA_E-fasciculatus_F_contig1390.2862.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2118bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1390:1564..6890- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |