prot_E-fasciculatus_F_contig13894.2855.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13894.2855.1
Unique Nameprot_E-fasciculatus_F_contig13894.2855.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length193
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13894.2855.1 vs. uniprot
Match: D7G8A9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8A9_ECTSI)

HSP 1 Score: 263 bits (671), Expect = 8.790e-78
Identity = 169/192 (88.02%), Postives = 174/192 (90.62%), Query Frame = 0 
Query:    2 AMLEARPTYRLLQTYSLLSAVLRKVPVARSSXXXXXXXXXXXXXXXXXGQALFSTVMPAELNKKELTKGVLSGSPLLQAATMNLMATILDRASLVAAAAAATIAGSPPSPLGVVEMKALLRQRMPDLQTLLGLRDKIGVGVGDAAGKVPGGQHVGRAVVLRWRVLSLLDRYARVIPASVAAARFDFLKLLPR 193
            AMLEARPTYRLLQTYSLLS VLRKVPVA S XXXXXXXXXXXXXX   GQALFSTVMPAELNKKELT+GVLSGSPLLQAATMNLMA ILDR+SLVAAAAA    GS PSP GVV+MK LLRQRMPDLQTLLGLRDKIGVG GDA+ K PGGQHV RAVVLRWRVLSLLDRYARVIP+SVAAARFDFLKLLPR
Sbjct:  547 AMLEARPTYRLLQTYSLLSTVLRKVPVAGSXXXXXXXXXXXXXXXA--GQALFSTVMPAELNKKELTRGVLSGSPLLQAATMNLMAGILDRSSLVAAAAA----GSSPSPPGVVDMKRLLRQRMPDLQTLLGLRDKIGVGAGDAS-KAPGGQHVDRAVVLRWRVLSLLDRYARVIPSSVAAARFDFLKLLPR 731
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BLAST of mRNA_E-fasciculatus_F_contig13894.2855.1 vs. uniprot
Match: A0A6H5K182_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K182_9PHAE)

HSP 1 Score: 259 bits (662), Expect = 1.450e-76
Identity = 163/192 (84.90%), Postives = 169/192 (88.02%), Query Frame = 0 
Query:    2 AMLEARPTYRLLQTYSLLSAVLRKVPVARSSXXXXXXXXXXXXXXXXXGQALFSTVMPAELNKKELTKGVLSGSPLLQAATMNLMATILDRASLVAAAAAATIAGSPPSPLGVVEMKALLRQRMPDLQTLLGLRDKIGVGVGDAAGKVPGGQHVGRAVVLRWRVLSLLDRYARVIPASVAAARFDFLKLLPR 193
            A+LEARPTYRLLQTYSLLSAVLRKVPVA SS     XXXXXXXXX   GQALFSTVMPAELNKKELT+GVLSGS LLQAATMNLMA+ILDRASLV AAAA    GS PSP GVVEMK LLRQRMPDLQTLLGLRDKIGVG GD + KV GGQHV RAVVLRWRVLSLLDRYAR+IP+SVAAARFDFLKLLPR
Sbjct:  530 AILEARPTYRLLQTYSLLSAVLRKVPVAGSSPLSEEXXXXXXXXXA--GQALFSTVMPAELNKKELTRGVLSGSTLLQAATMNLMASILDRASLVVAAAA----GSSPSPPGVVEMKRLLRQRMPDLQTLLGLRDKIGVGAGDGS-KVTGGQHVDRAVVLRWRVLSLLDRYARLIPSSVAAARFDFLKLLPR 714
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13894.2855.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8A9_ECTSI8.790e-7888.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K182_9PHAE1.450e-7684.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039844Nucleolar pre-ribosomal-associated protein 1PANTHERPTHR13500NUCLEOLAR PRERIBOSOMAL-ASSOCIATED PROTEIN 1coord: 4..192
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..193
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13894contigE-fasciculatus_F_contig13894:2223..2801 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13894.2855.1mRNA_E-fasciculatus_F_contig13894.2855.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13894 2223..2804 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13894.2855.1 ID=prot_E-fasciculatus_F_contig13894.2855.1|Name=mRNA_E-fasciculatus_F_contig13894.2855.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=193bp
MAMLEARPTYRLLQTYSLLSAVLRKVPVARSSSSGEDGGGGGGGAAAAAG
QALFSTVMPAELNKKELTKGVLSGSPLLQAATMNLMATILDRASLVAAAA
AATIAGSPPSPLGVVEMKALLRQRMPDLQTLLGLRDKIGVGVGDAAGKVP
GGQHVGRAVVLRWRVLSLLDRYARVIPASVAAARFDFLKLLPR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039844URB1