prot_E-fasciculatus_F_contig13882.2851.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13882.2851.1
Unique Nameprot_E-fasciculatus_F_contig13882.2851.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length724
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13882.2851.1 vs. uniprot
Match: D7FWK1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWK1_ECTSI)

HSP 1 Score: 824 bits (2129), Expect = 7.470e-273
Identity = 584/708 (82.49%), Postives = 602/708 (85.03%), Query Frame = 0 
Query:   20 LRGDGGGSGFGGEDFALGKSLEHDHGFFNHKEDALYRKVQARSSKSSK-KGLGRGXXXXXXXXXXXXXXXXXXXXXXXXRKSTGSSLLKISDSISSSGSVGXXXXXXXXXXXXXXNKINRSASASGGRKDPLKAGLDFSTLAGAAKKINRSQSLLLVAKQP-SQADTASARKSTAKLRSQEVKKAMKDKEDRCDVEKTAEVGLWQTSAGEWRTLAREKSDESWDARPGFYDGGDGG-HGSSSQAHPSRLLHEEDGIQNRIKKLASCHWSRANRPLDSMVRKAQTSLAKALRKGAKRVLLPGLELRYPQNVAALLDDAAQAWEHGLLRPRRAGNNSNVMASEAKTPLAWTKSWSPIQVMDLSGNHLEGIDSLLMVETLPGVAAAGVVSDDGEESAGNQSEAGGRRTAPVYPLAGLRELRLNGNMLHGLPGNMALVLPSLEKLELSGNWIEEIRAPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAARGLDSVKRYFRDVESKHRDDGDDDDMVAEEVHVEVPNLVKVIFIGHQDAGKSEVVKGLLSTKPHTNNNKDSSIVSTPANGTPSLLSATSTPLQQQPRRLGA-----PXXXXXXXXXXXXXDGEGWQVVGTGRHRSVPASNPPPNRPQHGRSETPPYGVGTPASGRVRGLGTTKTATGRSGG 719
            LRGDGG +GFGGED ALGKSLEHDHGFFNHKEDALYRKV+ARS+KSSK KGLGRG        XXXXXXXXXX      RKS GSSLLKI DS+S+S SVG     XXXX     NKINRSASASGG+KDPLKAGLDF  LAG+A+KINRSQSLLLV KQP SQ + AS RK+  KLRSQEV+KAMKDKEDRC+VEKTA VGLWQTS GEW TLA EKSDESWDAR    +GGDGG H SS QA P+RLL EE+GI  RIKKLA       NRPLDSMVRKAQTSLAKALRKG KRVLLPGLELRYPQNVAALLDDAAQAWEHGLL PRR GNNS+V AS AKTPLAWTKSWSPIQVMDLSGN LEGIDSLLMVETLPGV  A  VS DGE   GNQSEAGGRRTAPVYPLAGLRELRLNGNMLHGLPGNMALVLPSLEKLELSGNWIEEIRAPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAARGLDSVKRYFRDVESKHRDD  DDDMVAEEVHVEVPNLVKVIFIGH DAGKSEVVKGLLSTKPHTNN  D SIVSTP   TPSL SATSTPLQQ PRRLGA     P       XXXXXX  EGWQVVGTGR RS+PASNPPPNRPQHGRSE PP+GVGTPASGRVRG GT KT T RSGG
Sbjct:  227 LRGDGGRNGFGGEDLALGKSLEHDHGFFNHKEDALYRKVEARSTKSSKNKGLGRGGSSGSLAGXXXXXXXXXXSWGRNGRKSGGSSLLKIGDSVSTSSSVGGGCDGXXXXKGSG-NKINRSASASGGKKDPLKAGLDFDALAGSARKINRSQSLLLVPKQPPSQTNMASVRKNRTKLRSQEVRKAMKDKEDRCNVEKTAAVGLWQTSGGEW-TLAPEKSDESWDARASLCNGGDGGGHSSSWQARPNRLLQEEEGILGRIKKLA-------NRPLDSMVRKAQTSLAKALRKGGKRVLLPGLELRYPQNVAALLDDAAQAWEHGLLHPRRGGNNSSV-ASGAKTPLAWTKSWSPIQVMDLSGNDLEGIDSLLMVETLPGVVGA-AVSKDGEGGGGNQSEAGGRRTAPVYPLAGLRELRLNGNMLHGLPGNMALVLPSLEKLELSGNWIEEIRAPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAARGLDSVKRYFRDVESKHRDD--DDDMVAEEVHVEVPNLVKVIFIGHADAGKSEVVKGLLSTKPHTNN--DGSIVSTPTKSTPSL-SATSTPLQQ-PRRLGAAPRTPPLPPLPLPXXXXXXXXEGWQVVGTGRQRSLPASNPPPNRPQHGRSEPPPHGVGTPASGRVRGSGT-KTTTARSGG 916
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BLAST of mRNA_E-fasciculatus_F_contig13882.2851.1 vs. uniprot
Match: A0A6H5J7I8_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7I8_9PHAE)

HSP 1 Score: 814 bits (2102), Expect = 1.070e-268
Identity = 605/746 (81.10%), Postives = 621/746 (83.24%), Query Frame = 0 
Query:   20 LRGDGGGSGFGGEDFALGKSLEHDHGFFNHKEDALYRKVQARSSKSSK-KGLGRGXXXXXXXXXXXXXXXXXXXXXXXXRKSTGSSLLKISDSISSSGSVGXXXXXXXXXXXXXXNKINRSASASGGRKDPLKAGLDFSTLAGAAKKINRSQSLLLVAKQP-SQADTASARKSTAKLRSQEVKKAMKDKEDRCDVEKTAEVGLWQTSAGEWRTLAREKSDESWDARPGFYDGGDGG-HGSSSQAHPSRLLHEEDGIQNRIKKLASCHWSR--------------------------------------------ANRPLDSMVRKAQTSLAKALRKGAKRVLLPGLELRYPQNVAALLDDAAQAWEHGLLRPRRAGNNSNVMASEAKTPLAWTKSWSPIQVMDLSGNHLEGIDSLLMVETLPGVAAAGVVSDDGEESAGNQSEAGGRRTAPVYPLAGLRELRLNGNMLHGLPGNMALVLPSLEKLELSGNWIEEIRAPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAARGLDSVKRYFRDVESKHRDDGDDDDMVAEEVHVEVPNLVKVIFIGHQDAGKSEVVKGLLSTKPHTNNNKDSSIVSTPANGTPSLLSATSTPLQQQPRRLGAPXXXXXXXXXXXXXDGEGWQVVGTGRHRSVPASNPPPNRPQHGRSETPPYGVGTPASGRVRGLGTTKTATGRSG 718
            LRGDGGG+ FGGED ALGKSLEHDHGFFNHKEDALYRKV+ARS+KSSK KGLGRG       XXXXXXXXXXXXXXXX RKS GSSLLKISDS S+S SVG XXXXXXXXXXXXX KINRSASASGG+KD LKAGLDF  LAG+A+KINRSQSLLLV KQP SQA+ AS RKS  KLR QEVKKAMKDKEDRCDVEKTA VGLWQTS GEW TLA +KSDESWDAR    +GGDGG H SS QAHP+RLL  E+GI  RIKKLASC+WSR                                            ANRPLDSMVRKAQTSLAKALRKG K VLLPGLELRYPQNVAALLDDAAQAWEHGLL PRR GNN +V AS  KTPLAWTKSWSPIQVMDLSGN LEGIDSLLMVETLPGVA  GVVS DG   AGNQSEAGGRRTAPVYPLAGLRELRLNGNMLHGLPGNMALVLPSLEKLELSGNWIEEIRAPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAARGLDSVKRYFRDVE KHRDD     MVAEEV VEVPNLVKVIFIGH DAGKSEVVKGLLSTKPHTNN  DSSIVSTPAN TPSL SATSTPLQQ PRRLGA     XXXXXXXXX  EGWQVVGTGR RS+PASNPPPNRPQHGRSE PP+GVGTPASGRVRG GT KTAT RSG
Sbjct:  182 LRGDGGGNCFGGEDLALGKSLEHDHGFFNHKEDALYRKVEARSTKSSKNKGLGRGGSSGSLAXXXXXXXXXXXXXXXXGRKSGGSSLLKISDSASTSSSVGGXXXXXXXXXXXXX-KINRSASASGGKKDTLKAGLDFDALAGSARKINRSQSLLLVPKQPLSQANMASERKSKTKLRRQEVKKAMKDKEDRCDVEKTAAVGLWQTSGGEW-TLAPDKSDESWDARASLANGGDGGGHSSSWQAHPNRLLQAEEGILGRIKKLASCYWSRVSLGVPRGFERFLSFATSVPRQQTVVAVAAYHPRIRTLRDTGSEANRPLDSMVRKAQTSLAKALRKGGKLVLLPGLELRYPQNVAALLDDAAQAWEHGLLHPRRGGNNISV-ASGVKTPLAWTKSWSPIQVMDLSGNDLEGIDSLLMVETLPGVAG-GVVSKDG--GAGNQSEAGGRRTAPVYPLAGLRELRLNGNMLHGLPGNMALVLPSLEKLELSGNWIEEIRAPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAARGLDSVKRYFRDVEGKHRDDXXXXXMVAEEVQVEVPNLVKVIFIGHADAGKSEVVKGLLSTKPHTNN--DSSIVSTPANSTPSL-SATSTPLQQ-PRRLGAAPRTPXXXXXXXXXXXEGWQVVGTGRQRSLPASNPPPNRPQHGRSEPPPHGVGTPASGRVRGSGT-KTATARSG 916
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13882.2851.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FWK1_ECTSI7.470e-27382.49LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5J7I8_9PHAE1.070e-26881.10Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 451..472
e-value: 27.0
score: 9.7
coord: 474..497
e-value: 0.047
score: 22.8
coord: 521..544
e-value: 76.0
score: 6.1
coord: 427..449
e-value: 18.0
score: 11.1
coord: 498..520
e-value: 36.0
score: 8.7
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 475..534
e-value: 1.4E-8
score: 34.3
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 476..497
score: 7.489
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 523..544
score: 5.055
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 370..391
score: 5.671
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 453..475
score: 6.418
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 429..450
score: 6.241
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 500..522
score: 5.055
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 370..619
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 366..539

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13882contigE-fasciculatus_F_contig13882:1..3501 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13882.2851.1mRNA_E-fasciculatus_F_contig13882.2851.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13882 1..3502 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13882.2851.1 ID=prot_E-fasciculatus_F_contig13882.2851.1|Name=mRNA_E-fasciculatus_F_contig13882.2851.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=724bp
GGGSSSSVGDGGGATTTEELRGDGGGSGFGGEDFALGKSLEHDHGFFNHK
EDALYRKVQARSSKSSKKGLGRGGSSGSLAGRDGGTGGGAGSGGRNGRKS
TGSSLLKISDSISSSGSVGGGGDGGGGGKKGGGNKINRSASASGGRKDPL
KAGLDFSTLAGAAKKINRSQSLLLVAKQPSQADTASARKSTAKLRSQEVK
KAMKDKEDRCDVEKTAEVGLWQTSAGEWRTLAREKSDESWDARPGFYDGG
DGGHGSSSQAHPSRLLHEEDGIQNRIKKLASCHWSRANRPLDSMVRKAQT
SLAKALRKGAKRVLLPGLELRYPQNVAALLDDAAQAWEHGLLRPRRAGNN
SNVMASEAKTPLAWTKSWSPIQVMDLSGNHLEGIDSLLMVETLPGVAAAG
VVSDDGEESAGNQSEAGGRRTAPVYPLAGLRELRLNGNMLHGLPGNMALV
LPSLEKLELSGNWIEEIRAPRAPLPSLKHLDLGYNSLLELPAEVCLAMPS
LEVLLLPNNLLEWLPREVVGLRRLKRLDVGRNPLTSPPVEVAARGLDSVK
RYFRDVESKHRDDGDDDDMVAEEVHVEVPNLVKVIFIGHQDAGKSEVVKG
LLSTKPHTNNNKDSSIVSTPANGTPSLLSATSTPLQQQPRRLGAPPRTPP
PPTPPPPDDGEGWQVVGTGRHRSVPASNPPPNRPQHGRSETPPYGVGTPA
SGRVRGLGTTKTATGRSGGGGGAV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR003591Leu-rich_rpt_typical-subtyp