prot_E-fasciculatus_F_contig13870.2844.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13870.2844.1
Unique Nameprot_E-fasciculatus_F_contig13870.2844.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length566
Homology
BLAST of mRNA_E-fasciculatus_F_contig13870.2844.1 vs. uniprot
Match: A0A6H5L5T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5T5_9PHAE)

HSP 1 Score: 495 bits (1274), Expect = 4.750e-161
Identity = 347/453 (76.60%), Postives = 359/453 (79.25%), Query Frame = 0
Query:  115 DLWSKGDLVVLKARTSKGMNKLGGVARVLEVFEDGTYLVKLSLGGKPTRVASDLLFSYTPSPEPAFRGRRRSTASRRRDTAEGGGAREVDPSNGWVPSSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHAAVMTA-ARPGDRARVLYDDTDWYMATVVGLHRGSSVTVRFDDGSEARVTLSPGDAEICADDALAPTAASSSEXXXXXXXXXXXXXXXXXXXXXXRRRLGRGVVSKGVRTLGPGGRVLGEGEGKALTEERARALLDTAPQKLVGLVYQEHHRGYGGWWETVVTEVSEERMGGTGGSDKDGDGGGDAMWPELVVVGQMDRSGENIKVVGSAATASSAALSGEGXXXXDEPDFVYTRKTKSLLSRLRTWDKHREAEWEATALEADDEVAATA 566
            D WSKGDLVVLKARTSKGMNKLGGVARVLEVFEDGTY VKLSLGGKPTRV SDLLFSYTPSPEPAFRGRRRSTASRRRDTAEGG  REVDPSNGWVPSSPS                      XXXXXXXXXXXXXXXXXXX                  XXXXXXXXXXXXXXXXXXXX          ARPGDRARVLYD+TDWYMATVVG+HRGSSVTVRFDDGS+ARVTLSPGDAEICADDALAP A+    XXXXXXXXXXXXXXXXXXX     R G GV  KGVR LG GGRVLGEGEGKALTEERA+ALLDTAPQKLVGLVYQEHHRGYGGWWETVVTEVSEERMG +GG+ +D DGGG+AMWPE VVVGQMDRSGE +K    +A           XXXX EPDFVYTRKT+SLLSRLRTWDKHREAEWEATALEADDE AA A
Sbjct:  581 DSWSKGDLVVLKARTSKGMNKLGGVARVLEVFEDGTYFVKLSLGGKPTRVGSDLLFSYTPSPEPAFRGRRRSTASRRRDTAEGG-PREVDPSNGWVPSSPSSCSSSPSPKRTRSKDGSGRSVSXXXXXXXXXXXXXXXXXXXRRSLLRRGVKKNSGDGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARPGDRARVLYDNTDWYMATVVGVHRGSSVTVRFDDGSKARVTLSPGDAEICADDALAPAASEPXXXXXXXXXXXXXXXXXXXXX-----RPGSGVAVKGVRALGAGGRVLGEGEGKALTEERAKALLDTAPQKLVGLVYQEHHRGYGGWWETVVTEVSEERMGDSGGAGRDKDGGGNAMWPESVVVGQMDRSGEKVKAKAGSAXXXXXXX---XXXXXXEPDFVYTRKTRSLLSRLRTWDKHREAEWEATALEADDEAAAAA 1024          
BLAST of mRNA_E-fasciculatus_F_contig13870.2844.1 vs. uniprot
Match: D8LSY7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSY7_ECTSI)

HSP 1 Score: 481 bits (1237), Expect = 2.400e-153
Identity = 351/457 (76.81%), Postives = 368/457 (80.53%), Query Frame = 0
Query:  115 DLWSKGDLVVLKARTSKGMNKLGGVARVLEVFEDGTYLVKLSLGGKPTRVASDLLFSYTPSPEPAFRGRRRSTASRRRDTAEGGGAREVDPSNGWVPSSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHA-------AVMT--AARPGDRARVLYDDTDWYMATVVGLHRGSSVTVRFDDGSEARVTLSPGDAEICADDALAPTAASSSEXXXXXXXXXXXXXXXXXXXXXXRRRLGRGVVSKGVRTLGPGGRVLGEGEGKALTEERARALLDTAPQKLVGLVYQEHHRGYGGWWETVVTEVSEERMGGTGGSDKDGDGGGDAMWPELVVVGQMDRSGENIKVVGSAATASSAALSGEGXXXXDEPDFVYTRKTKSLLSRLRTWDKHREAEWEATALEADDEV 562
            D WSKGDLVVLKARTSKGMNKLGGVARVLEVFEDGTY VKLSLGGKPTRV SDLLFSYTPSPEPAFRGRR+ TASRRRDT EGGG  E DP NG VPSSPS       XXXXX                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           A MT  AARPGDRARVLYD+TDWYMATVVG+HRGSSVTVRFDDGSEAR+ LSPGDAEICADDALAP A+    XXXXXXXXXXXXXXXX      RRR GRGVV+KGVR LG GGR+LGEGEGKALTEERA+ALLDTAP+KLVGLVYQEHHRGYGGWWETVVTEVSEERMG +GG+ +D DG G+AMWPE VVVGQ+DRSGE +K    A +          XXXX EPDFVYTRKT+ LLSRLR WDKHREAEWEATALEADDEV
Sbjct:  545 DSWSKGDLVVLKARTSKGMNKLGGVARVLEVFEDGTYFVKLSLGGKPTRVGSDLLFSYTPSPEPAFRGRRKCTASRRRDTPEGGGGGERDPHNGGVPSSPSACSSPPSXXXXXKRTKSKNPRGPSVSSSGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAAMTKAAARPGDRARVLYDNTDWYMATVVGVHRGSSVTVRFDDGSEARLALSPGDAEICADDALAPAASEPPAXXXXXXXXXXXXXXXX------RRRPGRGVVAKGVRALGAGGRILGEGEGKALTEERAKALLDTAPEKLVGLVYQEHHRGYGGWWETVVTEVSEERMGDSGGAGRDRDGRGNAMWPESVVVGQIDRSGEKVKT--KAGSXXXXXXXXXXXXXXXEPDFVYTRKTRWLLSRLRMWDKHREAEWEATALEADDEV 993          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13870.2844.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L5T5_9PHAE4.750e-16176.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSY7_ECTSI2.400e-15376.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.140coord: 302..351
e-value: 2.3E-5
score: 26.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13870contigE-fasciculatus_F_contig13870:1064..3503 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13870.2844.1mRNA_E-fasciculatus_F_contig13870.2844.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13870 1064..3503 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13870.2844.1 ID=prot_E-fasciculatus_F_contig13870.2844.1|Name=mRNA_E-fasciculatus_F_contig13870.2844.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=566bp
SVAASPASGARAAGGDGSISSAATSACPVARITAEPTPPAAAAAAAPPAA
EAAPQQDQTSSVTAAPESTRPDAPQVDITPRDRASQASSAEGSGAGAGAG
GGGGATAGDSAAGRDLWSKGDLVVLKARTSKGMNKLGGVARVLEVFEDGT
YLVKLSLGGKPTRVASDLLFSYTPSPEPAFRGRRRSTASRRRDTAEGGGA
REVDPSNGWVPSSPSSCSSSASPSPKRTTTSKGRRGRSSGSSGGAAGSDK
SSSPRRSRRAVKKKSGDGTAAAAAAAAASSDPAATGAEDDDGGDAAHAAV
MTAARPGDRARVLYDDTDWYMATVVGLHRGSSVTVRFDDGSEARVTLSPG
DAEICADDALAPTAASSSEPPPPTPTPTPTTSGRSRGGGGGRRRLGRGVV
SKGVRTLGPGGRVLGEGEGKALTEERARALLDTAPQKLVGLVYQEHHRGY
GGWWETVVTEVSEERMGGTGGSDKDGDGGGDAMWPELVVVGQMDRSGENI
KVVGSAATASSAALSGEGGDDDDEPDFVYTRKTKSLLSRLRTWDKHREAE
WEATALEADDEVAATA
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