prot_E-fasciculatus_F_contig1387.2843.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1387.2843.1
Unique Nameprot_E-fasciculatus_F_contig1387.2843.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length624
Homology
BLAST of mRNA_E-fasciculatus_F_contig1387.2843.1 vs. uniprot
Match: D8LDR3_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDR3_ECTSI)

HSP 1 Score: 988 bits (2555), Expect = 0.000e+0
Identity = 518/624 (83.01%), Postives = 531/624 (85.10%), Query Frame = 0
Query:    1 MVGKAFGIAVALAATAAPRARAEQVLVASLVDDITYADIVPSGTCADGCTRYEQAVAHVTGTPDQVDCGLQTVSPFDSSTPEPGLLRALIYCEDSSGTLIEQGTRPCIFDVCVDFSWNVGDGDGEGELTYEVVVERASKPSAPHTIYVDLSVAIDPTSTNTNVDSCQYNGTCDPQVCETPNNYGAVISMTDEYGDGWVGGVDGYYNTWQLTDLTTDTVWSKGTLADNHESATIKECLADGEYKFNTTATSAFADDMGWGICDNYGTAGEGLIFTVLNGACDGGSATPIARETAEETSDAAGSYCVLPAPESDEDYRTSTCTALSSGMKIDGVGLYYDDRCNSADYSGCYARSIPACRLCFYDKDLWMSRFPNSRVPDWELCPCCVADTLGIDCASGGGGGTDEGVIIGVSVGIAGVIAIACCLSCAFGPTIVRFLRRMRKKKHAEDQLDLDGHAGTSAFPESPSGGMSGGGNTLRGAVLTHGNRDRGRSGHFPIPRFDSIRGRFDSGIFASNVGGXXXXXXXXXXXXXXVGAGAHVGGGGPSGELEKISAEQANVSTTAQSTPSGVNGNATGTGGGGKKSGNAPRSTVLDGRLVAQGYATSDMGRPTSLTSGTSGAATAGGGEG 624
            M+ KAFGIAVALAATAAPR RAEQVLVASLVDDITY DIVPSGTCADGC RYEQAVAHVTGTPDQ+DCGLQTVSPFDSSTPEPGLLRALIYCEDSSGTLIEQGTRPC+FDVCVDFSW+ GD     ELTYE                                    +NGTC+ Q CE PN YGAVISMTDEYGDGWVGGVDGYYNTWQLTDLTTDTVWSKGTLADNHESATIKECLADGEY FNTTATSAFADDMGWGICDNYG AGEGL FTVLNGACDG SA  IAR TAEETSDA  SYCVLPAPESD DYRTSTCTALSSGMKIDGVGL+YDDRCNSADYSGC+ARSIPACRLCF+DKDLW+SRFP+SRVPDWELCPCCVADTLGIDCASGGGGGTDEGVIIGVSVGIAGVIAIACCLSCAFGPTIVRFLRRMRKKKHAEDQLDLDGH GTSAFPESP GGM G GNTLRGAVLTHGNRDRGRSGHFPIPRFDSIRGRFDSGIFASNVGG XXXXXX       VGA AHVGGGGPSGELEKISAEQANVSTTAQSTPSG N           K+GNAPRSTVLDGRLVAQGY T+DM RPTS  SG S AATA GG G
Sbjct:    1 MISKAFGIAVALAATAAPRGRAEQVLVASLVDDITYTDIVPSGTCADGCVRYEQAVAHVTGTPDQLDCGLQTVSPFDSSTPEPGLLRALIYCEDSSGTLIEQGTRPCVFDVCVDFSWSSGDXXXXXELTYE------------------------------------FNGTCEVQTCEEPNAYGAVISMTDEYGDGWVGGVDGYYNTWQLTDLTTDTVWSKGTLADNHESATIKECLADGEYMFNTTATSAFADDMGWGICDNYGAAGEGLKFTVLNGACDGESAELIARATAEETSDAGDSYCVLPAPESDVDYRTSTCTALSSGMKIDGVGLFYDDRCNSADYSGCFARSIPACRLCFWDKDLWLSRFPSSRVPDWELCPCCVADTLGIDCASGGGGGTDEGVIIGVSVGIAGVIAIACCLSCAFGPTIVRFLRRMRKKKHAEDQLDLDGHPGTSAFPESPGGGMGGSGNTLRGAVLTHGNRDRGRSGHFPIPRFDSIRGRFDSGIFASNVGGGXXXXXXG------VGARAHVGGGGPSGELEKISAEQANVSTTAQSTPSGANXXXXXXXXXXXKAGNAPRSTVLDGRLVAQGYTTTDMERPTS--SGPSRAATAAGGGG 580          
BLAST of mRNA_E-fasciculatus_F_contig1387.2843.1 vs. uniprot
Match: A0A6H5L5M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M6_9PHAE)

HSP 1 Score: 853 bits (2205), Expect = 4.250e-307
Identity = 414/464 (89.22%), Postives = 430/464 (92.67%), Query Frame = 0
Query:    1 MVGKAFGIAVALAATAAPRARAEQVLVASLVDDITYADIVPSGTCADGCTRYEQAVAHVTGTPDQVDCGLQTVSPFDSSTPEPGLLRALIYCEDSSGTLIEQGTRPCIFDVCVDFSWNVGDGDGEGELTYEVVVERASKPSAPHTIYVDLSVAIDPTSTNTNVDSCQYNGTCDPQVCETPNNYGAVISMTDEYGDGWVGGVDGYYNTWQLTDLTTDTVWSKGTLADNHESATIKECLADGEYKFNTTATSAFADDMGWGICDNYGTAGEGLIFTVLNGACDGGSATPIARETAEETSDAAGSYCVLPAPESDEDYRTSTCTALSSGMKIDGVGLYYDDRCNSADYSGCYARSIPACRLCFYDKDLWMSRFPNSRVPDWELCPCCVADTLGIDCASGGGGGTDEGVIIGVSVGIAGVIAIACCLSCAFGPTIVRFLRRMRKKKHAEDQLDLDGHAGTSAFPESPS 464
            M+GKAFGIAVALAA AAPRARAEQ+LVASLVDDITYADIVPSGTCADGC RYEQAVAHVTGTPDQ+DC LQTVSPFDSSTPEPGLLRALIYCEDSSGTLIEQGTRPC+FDVCVDFSW+ GD     ELTYEV VER SKPSAPHTIYVDLSVAIDPTSTNTN DSCQYNGTC+ Q CE PN YGAVISMTDEYGDGWVGGVDGYYNTWQLTDLTTDTVWSKGTLADNHESATIKECLADGEY FNTTATSAFADDMGWGICDNYG AGEGL FTVLNGACDG SA  IAR TAEETSDA  SYCVLPAPESDEDYRTSTCTALSSGMKIDGVGL+YDDRCNSADYSGC+ARSIPACRLCF+DKDLWMSRFPNSRVPDWELCPCCVADTLGIDCASGGGGGTD+GVIIG+SVGIAGVIAIACCLSCAFGPTIVRF RR + K+  E+ LD+ G  GTSAFPESP+
Sbjct:  109 MIGKAFGIAVALAAIAAPRARAEQILVASLVDDITYADIVPSGTCADGCVRYEQAVAHVTGTPDQLDCDLQTVSPFDSSTPEPGLLRALIYCEDSSGTLIEQGTRPCVFDVCVDFSWSSGDXXXXXELTYEVRVERDSKPSAPHTIYVDLSVAIDPTSTNTNADSCQYNGTCEVQTCEAPNAYGAVISMTDEYGDGWVGGVDGYYNTWQLTDLTTDTVWSKGTLADNHESATIKECLADGEYMFNTTATSAFADDMGWGICDNYGAAGEGLKFTVLNGACDGESAELIARATAEETSDAGDSYCVLPAPESDEDYRTSTCTALSSGMKIDGVGLFYDDRCNSADYSGCFARSIPACRLCFWDKDLWMSRFPNSRVPDWELCPCCVADTLGIDCASGGGGGTDDGVIIGISVGIAGVIAIACCLSCAFGPTIVRFFRRFQNKRLDEEDLDMAGVLGTSAFPESPT 572          
BLAST of mRNA_E-fasciculatus_F_contig1387.2843.1 vs. uniprot
Match: A0A6H5L443_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L443_9PHAE)

HSP 1 Score: 255 bits (651), Expect = 1.220e-77
Identity = 143/171 (83.63%), Postives = 149/171 (87.13%), Query Frame = 0
Query:  438 MRKKKHAEDQLDLDGHAGTSAFPESPSGGMSGGGNTLRGAVLTHGNRDRGRSGHFPIPRFDSIRGRFDSGIFASNVGGXXXXXXXXXXXXXXVGAGAHVGGGGPSGELEKISAEQANVSTTAQSTPSGVNGNATGTGGGGKKSGNAPRSTVLDGRLVAQGYATSDMGRPTS 608
            MRKKKHAEDQLDLDGH GTSAFP+SP     GGGNTLRGAVLTHGNRDRGRSGHFPIPRFDSIRGRFDSGIFASNV G XXXXX          AGAHVGGGGPSGELEKISAEQANVSTTAQSTPSG NG+  GTGGGG+K+GNAPRSTVLDGRLVA+GY T+DMGRPTS
Sbjct:    1 MRKKKHAEDQLDLDGHPGTSAFPDSP-----GGGNTLRGAVLTHGNRDRGRSGHFPIPRFDSIRGRFDSGIFASNVAGGXXXXXV---------AGAHVGGGGPSGELEKISAEQANVSTTAQSTPSGANGSGVGTGGGGRKAGNAPRSTVLDGRLVAKGYTTTDMGRPTS 157          
BLAST of mRNA_E-fasciculatus_F_contig1387.2843.1 vs. uniprot
Match: A0A6H5KLX8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLX8_9PHAE)

HSP 1 Score: 225 bits (574), Expect = 2.620e-59
Identity = 154/434 (35.48%), Postives = 217/434 (50.00%), Query Frame = 0
Query:   29 SLVDDITYADIVPSGTCADGCTR-YEQAVAHVTGTPDQVDCGLQTVSPFDSSTPEP--GLLRALIYCEDSSGTLIEQGTRPCIFDVCVDFSWNVGDGDGEGEL-TYEVVVERASKPSAPHTI--------YVDLSVAIDPTSTNTNVDSCQYNGTC-DPQVCETPNNYGA-VISMTDEYGDGWVGGVDGYYNTWQLTDLTTDTVWSKGTLADNHESATIKECLADGEYKFNTTATSAFADDMGWGICDNYGTAGEGLIFTVLNGACD--GGSATPIARETAEETSDAAGSYCVLPAPESDEDYRTSTCTALSSGM-KIDG--VGLYYDDRC--NSADYSGCYARSIPACRLCFYDKDLWMSRFPNSRVPDWELCPCCVADTLGIDCASGGGGGT--DEGVI-----------------IGVSVGIAGVIAIACC 422
            S  D I  ADI P G C  GC R    A  +  G   +VDC L+  +  D +  +   G L  +  C +++G L+ Q    C++ VCV   W       +GEL TY VVVE A +PSA HT+        Y DL    D T  + +   C+   +C D   C  P+ Y   VI+ TDEYGDGWVGG+    NTW LTD ++ +V ++GTL D H S   K CL DG+Y F TTA +A++ +  W +C+  G  G  L F + N AC+    S+      T  ETS   G +C LPA +         C  L  G+ ++ G  VG+YYD+ C       +GC    +  CR+CF +++ W++ FP+ R PDW  CPCCVAD L + C +G   GT  DE ++                 +G  +G+  + A+ CC
Sbjct:   58 STSDAIVAADIEPGGPCDAGCVRTVVNAEVYAAG---EVDCELRVENLLDHTDEDVLGGSLNVVHSCTNAAGDLLYQDQGECLYSVCVTAEW-------KGELLTYTVVVEHA-EPSAAHTVLIEVYMNEYEDLLDRPDVTVVSDSSVLCELGTSCADSSAC--PSGYSELVITTTDEYGDGWVGGLPDRSNTWTLTDASSSSVVAEGTLHDWHFSGMTKLCLQDGDYSFETTADAAWSSESAWNVCEVDGGMGGSLDFEMSNSACNVLDSSSKDGPPATVAETS--LGDFCALPADD--------PCVDLDVGVAEVRGPSVGMYYDESCLEGGGGDTGCGGGGVTVCRICFVNREFWLADFPDERYPDWLDCPCCVADALVVTCQAGVETGTASDESIVEKAEAFYWEGGTLLCASLGGLIGLGLITALCCC 468          
BLAST of mRNA_E-fasciculatus_F_contig1387.2843.1 vs. uniprot
Match: D7G003_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G003_ECTSI)

HSP 1 Score: 214 bits (544), Expect = 1.990e-55
Identity = 136/413 (32.93%), Postives = 200/413 (48.43%), Query Frame = 0
Query:   84 GLLRALIYCEDSSGTLIEQGTRPCIFDVCVDFSWNVGDGDGEGEL-TYEVVVERASKPSAPHTIYVDLSV-----AIDPTSTNTNVDS---CQYNGTCDPQVCETPNNYGA-VISMTDEYGDGWVGGVDGYYNTWQLTDLTTDTVWSKGTLADNHESATIKECLADGEYKFNTTATSAFADDMGWGICDNYGTAGEGLIFTVLNGACDGGSATPIARETAEETSDAAGSYCVLPAPESDEDYRTSTCTALSSGM-KIDG--VGLYYDDRC--NSADYSGCYARSIPACRLCFYDKDLWMSRFPNSRVPDWELCPCCVADTLGIDCASGGGGGT--DEGVI-----------------IGVSVGIAGVIAIACCLSCAFGPTIVRFLRRMRKKKHAEDQLDLDGHAGTSAFPES 462
            G L  +  C ++ G L+ Q    C++ VCV   W       +GEL TY VVVE A +PSA HT+ V++ +      +D        DS   C+   +C       P+ Y   VI+ TDEYGDGWVGG+    NTW LTD  + +V ++GTL D H S   K CL DG+Y F TTA +A++ D  W +C+  G  G  L F V + AC+   ++      A +   ++G  C LPA ++        C     G+ ++ G  VG+YYD+ C       +GC    + ACR+CF +++ W++ FP+ R PDW  CPCCVAD LG+ C  GG  GT  DE ++                 +G  +G+  + A+ CC        +    +  R     +++   DG       P S
Sbjct:   15 GSLNVVHSCTNAEGDLLYQDQGECLYSVCVTAEW-------KGELLTYTVVVEHA-EPSAAHTVLVEVYMNEYQDLLDRPDVTVVADSSVLCELGTSCAASSA-CPSGYSELVITTTDEYGDGWVGGLPDRSNTWALTDAASSSVVAEGTLHDWHFSGMTKLCLQDGDYSFETTAYTAWSSDSAWNVCEVDGGMGGSLEFEVSSSACNVLDSSSKDGPPATDAETSSGDLCALPADDA--------CVGFDVGVAEVSGPSVGMYYDEACLEGGGGNTGCGGGGVTACRICFVNREFWLADFPDERYPDWLDCPCCVADALGVTCQGGGETGTASDESIVEQAEAFYWEGGTLLYASLGGLIGLGLITALCCCRDIRKANQLALSYKHFRAAAVTQNKYKEDGDTSPDVSPPS 410          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1387.2843.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LDR3_ECTSI0.000e+083.01Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L5M6_9PHAE4.250e-30789.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L443_9PHAE1.220e-7783.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLX8_9PHAE2.620e-5935.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G003_ECTSI1.990e-5532.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 405..432
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..404
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 433..624
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.535
NoneNo IPR availableTMHMMTMhelixcoord: 413..435

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1387contigE-fasciculatus_F_contig1387:10004..16984 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1387.2843.1mRNA_E-fasciculatus_F_contig1387.2843.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1387 9695..16984 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1387.2843.1 ID=prot_E-fasciculatus_F_contig1387.2843.1|Name=mRNA_E-fasciculatus_F_contig1387.2843.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=624bp
MVGKAFGIAVALAATAAPRARAEQVLVASLVDDITYADIVPSGTCADGCT
RYEQAVAHVTGTPDQVDCGLQTVSPFDSSTPEPGLLRALIYCEDSSGTLI
EQGTRPCIFDVCVDFSWNVGDGDGEGELTYEVVVERASKPSAPHTIYVDL
SVAIDPTSTNTNVDSCQYNGTCDPQVCETPNNYGAVISMTDEYGDGWVGG
VDGYYNTWQLTDLTTDTVWSKGTLADNHESATIKECLADGEYKFNTTATS
AFADDMGWGICDNYGTAGEGLIFTVLNGACDGGSATPIARETAEETSDAA
GSYCVLPAPESDEDYRTSTCTALSSGMKIDGVGLYYDDRCNSADYSGCYA
RSIPACRLCFYDKDLWMSRFPNSRVPDWELCPCCVADTLGIDCASGGGGG
TDEGVIIGVSVGIAGVIAIACCLSCAFGPTIVRFLRRMRKKKHAEDQLDL
DGHAGTSAFPESPSGGMSGGGNTLRGAVLTHGNRDRGRSGHFPIPRFDSI
RGRFDSGIFASNVGGGSGGGGGGSAAAGGVGAGAHVGGGGPSGELEKISA
EQANVSTTAQSTPSGVNGNATGTGGGGKKSGNAPRSTVLDGRLVAQGYAT
SDMGRPTSLTSGTSGAATAGGGEG
back to top