prot_E-fasciculatus_F_contig1385.2835.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-fasciculatus_F_contig1385.2835.1
Unique Name	prot_E-fasciculatus_F_contig1385.2835.1
Type	polypeptide
Organism	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length	177

Homology

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BLAST of mRNA_E-fasciculatus_F_contig1385.2835.1 vs. uniprot
Match: A0A6H5KXF6_9PHAE (YjgF_endoribonc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXF6_9PHAE)

HSP 1 Score: 317 bits (811), Expect = 9.710e-109
Identity = 162/176 (92.05%), Postives = 168/176 (95.45%), Query Frame = 0

Query:    1 MIASAAARVGATSRASLARCCRAIHVEAHLESKGITLPKAIVPPQGSYVVAYQTGKTLYISGHIPMTPEGVLLTGTVGRNITEEEGVAAARLVALNMLATLKYQLGDLDRVARIVKLNGYVQCVDGYAGQPAVINGASDLLAEAFGEKGVHARSAVGMSSMPLDIPVELEAIVEVE 176
            MIASAAARVGA SR SL RCCRA+HVEAHLESKGI LPKAIVPPQGSYVVAYQTGKTLY+SGHIPMTPEGVLLTGTVG +ITEEEGVAAA LVALNMLATLKYQLGDLDRVARIVKLNGYVQCVDGY GQP ++NGASDLLAEAFGEKG+HARSAVGMSSMPLDIPVELEAIVEVE
Sbjct:    4 MIASAAARVGAKSRTSLGRCCRAVHVEAHLESKGIKLPKAIVPPQGSYVVAYQTGKTLYVSGHIPMTPEGVLLTGTVGDSITEEEGVAAAHLVALNMLATLKYQLGDLDRVARIVKLNGYVQCVDGYTGQPTILNGASDLLAEAFGEKGIHARSAVGMSSMPLDIPVELEAIVEVE 179

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BLAST of mRNA_E-fasciculatus_F_contig1385.2835.1 vs. uniprot
Match: A0A4D9CNR0_9STRA (YjgF_endoribonc domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CNR0_9STRA)

HSP 1 Score: 180 bits (456), Expect = 4.660e-55
Identity = 87/153 (56.86%), Postives = 120/153 (78.43%), Query Frame = 0

Query:   24 IHVEAHLESKGITLPKAIVPPQGSYVVAYQTGKTLYISGHIPMTPEGVLLTGTVGRNITEEEGVAAARLVALNMLATLKYQLGDLDRVARIVKLNGYVQCVDGYAGQPAVINGASDLLAEAFGEKGVHARSAVGMSSMPLDIPVELEAIVEVE 176
            + +EA L   GI LP  ++ P+G+Y +A +TG  L+++GHIP+   GVL+TG VG + + EEG  AA+++A+N+LATLK +LGDLD+V RIVKL G+V CVDG++ QP V+NGASD   + FG+KGVHARSAVG +++PL+IPVE+EAIVEVE
Sbjct:    2 VQIEARLAQLGIDLPD-VIAPKGNYALAVRTGNLLFLAGHIPLLKSGVLMTGKVGADKSLEEGQEAAQVIAINLLATLKSELGDLDKVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVE 153

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BLAST of mRNA_E-fasciculatus_F_contig1385.2835.1 vs. uniprot
Match: A0A662WS90_9STRA (YjgF_endoribonc domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WS90_9STRA)

HSP 1 Score: 181 bits (460), Expect = 5.750e-55
Identity = 84/155 (54.19%), Postives = 122/155 (78.71%), Query Frame = 0

Query:   22 RAIHVEAHLESKGITLPKAIVPPQGSYVVAYQTGKTLYISGHIPMTPEGVLLTGTVGRNITEEEGVAAARLVALNMLATLKYQLGDLDRVARIVKLNGYVQCVDGYAGQPAVINGASDLLAEAFGEKGVHARSAVGMSSMPLDIPVELEAIVEVE 176
            R++H+E  LE  G TLP A+  P+G+Y  A ++G T+Y++GH+P    G ++TG VG+++T+EEG  AA  VAL+++ATLK ++GDLD++ R+VKL G+V CVDG+  QPAVINGASD + + FG+KG+HARSAVG +++PL++ VE+EAIVEVE
Sbjct:   51 RSVHIERKLEELGYTLP-AVATPKGNYRTAVRSGNTIYLAGHLPQPAGGDIITGKVGKDLTQEEGYDAAHYVALSLMATLKQEVGDLDKIKRVVKLVGFVNCVDGFTAQPAVINGASDTIGKVFGDKGIHARSAVGTNALPLNVAVEIEAIVEVE 204

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BLAST of mRNA_E-fasciculatus_F_contig1385.2835.1 vs. uniprot
Match: H3HDE8_PHYRM (YjgF_endoribonc domain-containing protein n=9 Tax=Peronosporaceae TaxID=4777 RepID=H3HDE8_PHYRM)

HSP 1 Score: 179 bits (453), Expect = 2.280e-54
Identity = 85/165 (51.52%), Postives = 124/165 (75.15%), Query Frame = 0

Query:   12 TSRASLARCCRAIHVEAHLESKGITLPKAIVPPQGSYVVAYQTGKTLYISGHIPMTPEGVLLTGTVGRNITEEEGVAAARLVALNMLATLKYQLGDLDRVARIVKLNGYVQCVDGYAGQPAVINGASDLLAEAFGEKGVHARSAVGMSSMPLDIPVELEAIVEVE 176
            T   SLA   R +H+E  LE  G TLP A+  P+G+Y  + ++G TLY++GH+P    G L+ G VG+++T E+G  AA  VAL+++ATLK+++GDLD++ R+VKL G+V CVDG+  QPAVINGASD + + FG+KG+HARSAVG +++PL++ VE+EA+VE+E
Sbjct:    7 TKPRSLATAVRNVHIERKLEELGYTLP-AVADPKGNYRTSVRSGNTLYLAGHLPQPAGGDLILGKVGKDLTPEQGYDAAHYVALSLMATLKHEVGDLDKIKRVVKLVGFVNCVDGFTQQPAVINGASDTIGKVFGDKGLHARSAVGTNALPLNVAVEIEAVVEIE 170

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BLAST of mRNA_E-fasciculatus_F_contig1385.2835.1 vs. uniprot
Match: A0A835Z1E3_9STRA (Putative translation initiation inhibitor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1E3_9STRA)

HSP 1 Score: 178 bits (452), Expect = 3.680e-54
Identity = 87/153 (56.86%), Postives = 116/153 (75.82%), Query Frame = 0

Query:   22 RAIHVEAHLESKGITLPKAIVPPQGSYVVAYQTGKTLYISGHIPMTPEGVLLTGTVGRNITEEEGVAAARLVALNMLATLKYQLGDLDRVARIVKLNGYVQCVDGYAGQPAVINGASDLLAEAFGEKGVHARSAVGMSSMPLDIPVELEAIVE 174
            R + +EA L  +GI L    VPP+G+YV A ++G TL+++GHIP+ P+  L  G VG+++T E+  A AR VA+N+L+TLK +LGDLDRV RIVKL G+V C D + GQP VINGASDL  E FG+KGVHARSAVG +++PL IPVE+EA++E
Sbjct:   19 RGVQIEARLAQRGIQLSDP-VPPKGNYVPAVRSGNTLFLAGHIPLMPDNNLAKGKVGKDVTPEQANAIARQVAINILSTLKVELGDLDRVTRIVKLVGFVNCTDDFTGQPGVINGASDLFVEVFGKKGVHARSAVGTNALPLGIPVEIEAVIE 170

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BLAST of mRNA_E-fasciculatus_F_contig1385.2835.1 vs. uniprot
Match: A0A3R7HFK6_9STRA (YjgF_endoribonc domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HFK6_9STRA)

HSP 1 Score: 177 bits (450), Expect = 6.730e-54
Identity = 85/165 (51.52%), Postives = 122/165 (73.94%), Query Frame = 0

Query:   12 TSRASLARCCRAIHVEAHLESKGITLPKAIVPPQGSYVVAYQTGKTLYISGHIPMTPEGVLLTGTVGRNITEEEGVAAARLVALNMLATLKYQLGDLDRVARIVKLNGYVQCVDGYAGQPAVINGASDLLAEAFGEKGVHARSAVGMSSMPLDIPVELEAIVEVE 176
            T   SLA   R +H+E  LE  G  LP+ +  P+G+Y  + ++G T+Y++GH+P    G L+TG VG+++T EE   AA  V+L+++ATLK ++GDLD++ R+VKL G+V CVDG+AGQPAVINGASD   + FG KGVHARSAVG +++PL++ VE+EA+VE+E
Sbjct:    8 TKPRSLATAVRNVHIERKLEELGYVLPE-VASPKGNYRTSVRSGNTIYMAGHLPQPAGGELITGKVGKDLTPEEAYDAAHYVSLSIMATLKQEVGDLDKIKRVVKLVGFVNCVDGFAGQPAVINGASDTFGKVFGNKGVHARSAVGTNALPLNVAVEIEAVVEIE 171

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BLAST of mRNA_E-fasciculatus_F_contig1385.2835.1 vs. uniprot
Match: A0A4D9CNR9_9STRA (YjgF_endoribonc domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CNR9_9STRA)

HSP 1 Score: 177 bits (449), Expect = 1.390e-53
Identity = 87/153 (56.86%), Postives = 117/153 (76.47%), Query Frame = 0

Query:   24 IHVEAHLESKGITLPKAIVPPQGSYVVAYQTGKTLYISGHIPMTPEGVLLTGTVGRNITEEEGVAAARLVALNMLATLKYQLGDLDRVARIVKLNGYVQCVDGYAGQPAVINGASDLLAEAFGEKGVHARSAVGMSSMPLDIPVELEAIVEVE 176
            IH EA L   G+ LP   VP +G++ +A ++GK +Y+SGH+P    G LLTG VG  ++ EE   AA+L+ALN+L++LK ++GDLDRV RIVKL G+V CVDG++ QP V+NGASD   + FG+KGVHARSAVG +++PL+IPVE+EAIVEVE
Sbjct:   32 IHTEAKLTEMGLKLPSPGVP-KGNFAMAVKSGKMIYLSGHLPTDANGQLLTGKVGAEVSPEEAQGAAKLIALNLLSSLKKEVGDLDRVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVE 183

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BLAST of mRNA_E-fasciculatus_F_contig1385.2835.1 vs. uniprot
Match: A0A6A3U578_9STRA (YjgF_endoribonc domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3U578_9STRA)

HSP 1 Score: 176 bits (445), Expect = 3.510e-53
Identity = 79/155 (50.97%), Postives = 121/155 (78.06%), Query Frame = 0

Query:   22 RAIHVEAHLESKGITLPKAIVPPQGSYVVAYQTGKTLYISGHIPMTPEGVLLTGTVGRNITEEEGVAAARLVALNMLATLKYQLGDLDRVARIVKLNGYVQCVDGYAGQPAVINGASDLLAEAFGEKGVHARSAVGMSSMPLDIPVELEAIVEVE 176
            R++H+E  LE  G TLP A+  P+G+Y  + ++G T+Y++GH+P    G L+ G +G+++T E+G  AA  VAL+++ATLK+++GDLD++ R+VKL G+V CVDG+  QPAVINGASD + + FG+KG+HARSAVG +++PL++ VE+EA+VE+E
Sbjct:   15 RSVHIERKLEQLGYTLP-AVADPKGNYRTSVRSGNTIYLAGHLPQPAGGELILGKIGQDLTPEQGYDAAHYVALSLMATLKHEVGDLDKIKRVVKLVGFVNCVDGFTQQPAVINGASDTIGKVFGDKGIHARSAVGTNALPLNVAVEIEAVVEIE 168

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BLAST of mRNA_E-fasciculatus_F_contig1385.2835.1 vs. uniprot
Match: W7TB75_9STRA (Endoribonuclease l-psp n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TB75_9STRA)

HSP 1 Score: 177 bits (448), Expect = 9.380e-53
Identity = 87/153 (56.86%), Postives = 117/153 (76.47%), Query Frame = 0

Query:   24 IHVEAHLESKGITLPKAIVPPQGSYVVAYQTGKTLYISGHIPMTPEGVLLTGTVGRNITEEEGVAAARLVALNMLATLKYQLGDLDRVARIVKLNGYVQCVDGYAGQPAVINGASDLLAEAFGEKGVHARSAVGMSSMPLDIPVELEAIVEVE 176
            IH EA L   G+ LP   VP +G++ +A ++GK +Y+SGH+P    G LLTG VG  ++ EE   AA+L+ALN+L++LK ++GDLDRV RIVKL G+V CVDG++ QP V+NGASD   + FG+KGVHARSAVG +++PL+IPVE+EAIVEVE
Sbjct:   83 IHTEAKLTEMGLKLPPPGVP-KGNFAMAVKSGKMIYLSGHLPTDANGQLLTGKVGAEVSPEEAQGAAKLIALNLLSSLKKEVGDLDRVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVE 234

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BLAST of mRNA_E-fasciculatus_F_contig1385.2835.1 vs. uniprot
Match: M4BMK3_HYAAE (YjgF_endoribonc domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BMK3_HYAAE)

HSP 1 Score: 176 bits (445), Expect = 1.420e-52
Identity = 84/168 (50.00%), Postives = 125/168 (74.40%), Query Frame = 0

Query:    9 VGATSRASLARCCRAIHVEAHLESKGITLPKAIVPPQGSYVVAYQTGKTLYISGHIPMTPEGVLLTGTVGRNITEEEGVAAARLVALNMLATLKYQLGDLDRVARIVKLNGYVQCVDGYAGQPAVINGASDLLAEAFGEKGVHARSAVGMSSMPLDIPVELEAIVEVE 176
            V  T   + A+  R +HVE  LE  G TLP A+  P+G+Y  + ++G T+Y++GH+P    G L+ G +G+++T E+G  AA  VAL+++ATLK ++GDLD++ RIVKL G+V CVDG++ QPAVINGASD + + FG+KG+HARSAVG +++PL++ VE+EA+VEV+
Sbjct:    5 VRVTKTRTFAKAVRNVHVERKLEELGYTLP-AVAEPKGNYRTSVRSGNTIYLAGHLPQPAGGDLIVGKIGKDLTLEQGYDAAHYVALSLMATLKNEVGDLDKIKRIVKLVGFVNCVDGFSQQPAVINGASDTIGKVFGDKGIHARSAVGTNALPLNVAVEIEAVVEVK 171

The following BLAST results are available for this feature:

BLAST of mRNA_E-fasciculatus_F_contig1385.2835.1 vs. uniprot

BLAST of mRNA_E-fasciculatus_F_contig1385.2835.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KXF6_9PHAE	9.710e-109	92.05	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A4D9CNR0_9STRA	4.660e-55	56.86	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A662WS90_9STRA	5.750e-55	54.19	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
H3HDE8_PHYRM	2.280e-54	51.52	YjgF_endoribonc domain-containing protein n=9 Tax=...	[more]
A0A835Z1E3_9STRA	3.680e-54	56.86	Putative translation initiation inhibitor n=1 Tax=...	[more]
A0A3R7HFK6_9STRA	6.730e-54	51.52	YjgF_endoribonc domain-containing protein n=3 Tax=...	[more]
A0A4D9CNR9_9STRA	1.390e-53	56.86	YjgF_endoribonc domain-containing protein n=1 Tax=...	[more]
A0A6A3U578_9STRA	3.510e-53	50.97	YjgF_endoribonc domain-containing protein n=4 Tax=...	[more]
W7TB75_9STRA	9.380e-53	56.86	Endoribonuclease l-psp n=2 Tax=Nannochloropsis gad...	[more]
M4BMK3_HYAAE	1.420e-52	50.00	YjgF_endoribonc domain-containing protein n=1 Tax=...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013813	Endoribonuclease L-PSP/chorismate mutase-like	PFAM	PF14588	YjgF_endoribonc	coord: 27..172 e-value: 5.8E-30 score: 104.4
IPR035959	RutC-like superfamily	GENE3D	3.30.1330.40		coord: 17..176 e-value: 1.1E-57 score: 196.0
IPR035959	RutC-like superfamily	SUPERFAMILY	55298	YjgF-like	coord: 25..175
None	No IPR available	PANTHER	PTHR43760	FAMILY NOT NAMED	coord: 25..176

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-fasciculatus_F_contig1385	contig	E-fasciculatus_F_contig1385:3868..7392 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-fasciculatus_F_contig1385.2835.1	mRNA_E-fasciculatus_F_contig1385.2835.1	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	mRNA	E-fasciculatus_F_contig1385 2958..7392 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-fasciculatus_F_contig1385.2835.1 ID=prot_E-fasciculatus_F_contig1385.2835.1|Name=mRNA_E-fasciculatus_F_contig1385.2835.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=177bp
MIASAAARVGATSRASLARCCRAIHVEAHLESKGITLPKAIVPPQGSYVV
AYQTGKTLYISGHIPMTPEGVLLTGTVGRNITEEEGVAAARLVALNMLAT
LKYQLGDLDRVARIVKLNGYVQCVDGYAGQPAVINGASDLLAEAFGEKGV
HARSAVGMSSMPLDIPVELEAIVEVE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR035959	RutC-like_sf
IPR013813	Endoribo_LPSP/chorism_mut-like