mRNA_E-fasciculatus_F_contig13830.2823.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13830.2823.1 vs. uniprot
Match: D7G535_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G535_ECTSI) HSP 1 Score: 278 bits (710), Expect = 5.170e-87 Identity = 151/156 (96.79%), Postives = 152/156 (97.44%), Query Frame = 1
Query: 1 LAPEAKNPAKHVPRALFASLLGVTIVCAMASVSLSGAESAPNLDADSAFAEAFRARGMTTAYKITAIGELATLPLVVLVSFMAQPRLLYAMAKDGLLPRAFAEVDSRGTLFKGSLISGGICMITALLVPFDSLNTLISAGVLLAFNFVTSSHLALR 468
LAPEAKNPAKHVPRALFASLLGVTIVCAMASVSLSGAESAPNLD DSAFAEAFRARGM TAY+IT IGELATLPLVVLVSFMAQPRLLYAMAKDGLLPR FAEVDSRGTLFKGSLISGGICMITALLVPFDSLNTLISAGVLLAFNFVTSSHLALR
Sbjct: 288 LAPEAKNPAKHVPRALFASLLGVTIVCAMASVSLSGAESAPNLDPDSAFAEAFRARGMMTAYQITTIGELATLPLVVLVSFMAQPRLLYAMAKDGLLPRVFAEVDSRGTLFKGSLISGGICMITALLVPFDSLNTLISAGVLLAFNFVTSSHLALR 443
BLAST of mRNA_E-fasciculatus_F_contig13830.2823.1 vs. uniprot
Match: A0A835ZA89_9STRA (Amino acid permease-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA89_9STRA) HSP 1 Score: 161 bits (408), Expect = 2.850e-43 Identity = 88/156 (56.41%), Postives = 115/156 (73.72%), Query Frame = 1
Query: 1 LAPEAKNPAKHVPRALFASLLGVTIVCAMASVSLSGAESAPNLDADSAFAEAFRARGMTTAYKITAIGELATLPLVVLVSFMAQPRLLYAMAKDGLLPRAFAEVDSRGTLFKGSLISGGICMITALLVPFDSLNTLISAGVLLAFNFVTSSHLALR 468
L+ E ++P ++VP +LF S+ VT V A A+++LSG + LD DS F AF+ RG+T AY++TA+GE+ TLPLVVLVSF+AQPRLLYAMA+DGLLP+ FAEVD GTLFK L+SG C+ A VPF+ ++ +ISAGVLL FN SS L +R
Sbjct: 311 LSAETRDPHRNVPLSLFISIAVVTGVYAFAAIALSGVVPSDQLDPDSGFTVAFKQRGLTWAYEVTAVGEIVTLPLVVLVSFIAQPRLLYAMAEDGLLPKMFAEVDRNGTLFKAGLVSGLACVAVAACVPFNLVDDMISAGVLLCFNATNSSLLVMR 466
BLAST of mRNA_E-fasciculatus_F_contig13830.2823.1 vs. uniprot
Match: A0A7S4IL23_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IL23_9STRA) HSP 1 Score: 139 bits (351), Expect = 1.030e-35 Identity = 80/156 (51.28%), Postives = 111/156 (71.15%), Query Frame = 1
Query: 1 LAPEAKNPAKHVPRALFASLLGVTIVCAMASVSLSGAESAPNLDADSAFAEAFRARGMTTAYKITAIGELATLPLVVLVSFMAQPRLLYAMAKDGLLPRAFAEVDSRGTLFKGSLISGGICMITALLVPFDSLNTLISAGVLLAFNFVTSSHLALR 468
+A EA NP++++PRA+ ASL VT++ +A+V+L+G ++ S F + FR RG+ A +++AIGEL TLPLVVLVS MAQPRL YAMA DGL+P FA++D+ G L+ G+LISG + ++ A VPF LN LISAG+L+AF SS + LR
Sbjct: 304 MAGEAINPSRNLPRAVLASLATVTVLYILAAVALTGMVPYQDISETSPFPDGFRYRGIIWASQLSAIGELFTLPLVVLVSIMAQPRLQYAMATDGLIPPIFAKMDANGNLWWGTLISGIVMILIATFVPFTFLNDLISAGILIAFTITDSSVILLR 459
BLAST of mRNA_E-fasciculatus_F_contig13830.2823.1 vs. uniprot
Match: A0A7S2XXX4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXX4_9STRA) HSP 1 Score: 132 bits (332), Expect = 1.870e-35 Identity = 70/156 (44.87%), Postives = 105/156 (67.31%), Query Frame = 1
Query: 1 LAPEAKNPAKHVPRALFASLLGVTIVCAMASVSLSGAESAPNLDADSAFAEAFRARGMTTAYKITAIGELATLPLVVLVSFMAQPRLLYAMAKDGLLPRAFAEVDSRGTLFKGSLISGGICMITALLVPFDSLNTLISAGVLLAFNFVTSSHLALR 468
L EA++PA+ +P A+ +++ V ++ +A+++L+G ++D +S F + FR RG +I +GEL TLPLVVL+ F+AQPRLL+AMA+D L+P FA++ + G LFKG+LISG C AL+VPF L+ L+SAG L AFN +S + R
Sbjct: 45 LGTEARDPARAIPLAVVGTVVTVGLLYCLAALALAGMVPMASIDPESGFVQGFRERGQGVLAEIVTVGELTTLPLVVLICFLAQPRLLFAMAEDDLMPAVFAKITTGGNLFKGTLISGIFCTAIALIVPFSYLDELVSAGALTAFNITNASLILFR 200
BLAST of mRNA_E-fasciculatus_F_contig13830.2823.1 vs. uniprot
Match: M4BPY3_HYAAE (AA_permease_C domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BPY3_HYAAE) HSP 1 Score: 138 bits (347), Expect = 7.260e-35 Identity = 73/156 (46.79%), Postives = 108/156 (69.23%), Query Frame = 1
Query: 1 LAPEAKNPAKHVPRALFASLLGVTIVCAMASVSLSGAESAPNLDADSAFAEAFRARGMTTAYKITAIGELATLPLVVLVSFMAQPRLLYAMAKDGLLPRAFAEVDSRGTLFKGSLISGGICMITALLVPFDSLNTLISAGVLLAFNFVTSSHLALR 468
LA EAK+PAK++PRA+ +++G + +A+ +L G ++ +DAD AF AF + G+ A A+GE+ T+P+ ++F+AQPR+ YAMAKDGLLPR FA+VD+ GTLF+G+L+SG AL VPF+ L +IS G+L+AFN +S L +R
Sbjct: 413 LAGEAKDPAKNIPRAIVGTIIGAATLSVLATFALVGMQTYTAIDADEAFGTAFTSIGLPWAASFVAVGEVLTMPITSFIAFLAQPRVQYAMAKDGLLPRVFADVDANGTLFRGTLLSGMGATALALFVPFNVLWNVISLGILVAFNLTNTSLLMVR 568
BLAST of mRNA_E-fasciculatus_F_contig13830.2823.1 vs. uniprot
Match: A0A7S4J7E7_9STRA (Hypothetical protein n=3 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J7E7_9STRA) HSP 1 Score: 135 bits (341), Expect = 2.690e-34 Identity = 80/153 (52.29%), Postives = 109/153 (71.24%), Query Frame = 1
Query: 10 EAKNPAKHVPRALFASLLGVTIVCAMASVSLSGAESAPNLDADSAFAEAFRARGMTTAYKITAIGELATLPLVVLVSFMAQPRLLYAMAKDGLLPRAFAEVDSRGTLFKGSLISGGICMITALLVPFDSLNTLISAGVLLAFNFVTSSHLALR 468
EAKNP+K++PRA+ ASLL VT + A+V+L+G ++ + SAF + FR RG A +I+A GEL TLPLVVLV+ MAQPRL YAM+ DGLLP FA++D G L+ G+LISG + ++ A VPF L+ LISAG+L+AF+ +S + LR
Sbjct: 290 EAKNPSKNLPRAVIASLLIVTSLYMFAAVALTGMVPYEDISSTSAFPDGFRYRGWEVAAEISAWGELFTLPLVVLVTIMAQPRLQYAMSIDGLLPPIFAQIDETGNLWFGTLISGILMVLIATFVPFVYLDDLISAGILVAFSMTDTSVVLLR 442
BLAST of mRNA_E-fasciculatus_F_contig13830.2823.1 vs. uniprot
Match: T0QJV3_SAPDV (AA_permease_C domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QJV3_SAPDV) HSP 1 Score: 134 bits (336), Expect = 7.780e-34 Identity = 77/156 (49.36%), Postives = 103/156 (66.03%), Query Frame = 1
Query: 1 LAPEAKNPAKHVPRALFASLLGVTIVCAMASVSLSGAESAPNLDADSAFAEAFRARGMTTAYKITAIGELATLPLVVLVSFMAQPRLLYAMAKDGLLPRAFAEVDSRGTLFKGSLISGGICMITALLVPFDSLNTLISAGVLLAFNFVTSSHLALR 468
LA EA +P VPRA+ ++LG ++ AMAS++L+G + N+ D FA AF A GM T I +GEL T+P+VV VSF+AQPR+ YAMA DGLLP FA VD G L G+L++GG+C + A VPF+ L +IS +L+AFN +S L LR
Sbjct: 240 LAAEASDPRTAVPRAVLGTILGTMVLSAMASLALAGMQPCANV-VD--FASAFEAHGMVTTAHIVRVGELLTMPVVVFVSFLAQPRVTYAMATDGLLPPIFARVDGDGRLRDGTLLTGGVCTLLAFCVPFEHLWEIISFAILIAFNLANASVLLLR 392
BLAST of mRNA_E-fasciculatus_F_contig13830.2823.1 vs. uniprot
Match: A0A7S2ELG1_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ELG1_TRICV) HSP 1 Score: 134 bits (337), Expect = 1.010e-33 Identity = 78/153 (50.98%), Postives = 106/153 (69.28%), Query Frame = 1
Query: 10 EAKNPAKHVPRALFASLLGVTIVCAMASVSLSGAESAPNLDADSAFAEAFRARGMTTAYKITAIGELATLPLVVLVSFMAQPRLLYAMAKDGLLPRAFAEVDSRGTLFKGSLISGGICMITALLVPFDSLNTLISAGVLLAFNFVTSSHLALR 468
EAK+PA+++PRA+ ASL VT + +A+++L+G ++ A S F FR R A +IT+IGEL TLPLVVLV+ MAQPRL YAMA DGLLP FA +D+ G L+ G+LISG + + A +PF L+ LISAG+L+AF+ SS + LR
Sbjct: 288 EAKDPARNLPRAVLASLAIVTTLYMLAAIALTGMVPYEDISATSGFPNGFRYRHWDAAAQITSIGELITLPLVVLVTIMAQPRLQYAMAVDGLLPPIFARLDASGNLWHGTLISGVLMTLIATCIPFTYLDDLISAGILVAFSMTDSSVILLR 440
BLAST of mRNA_E-fasciculatus_F_contig13830.2823.1 vs. uniprot
Match: W7TKI0_9STRA (Amino acid-polyamine-organocation family n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKI0_9STRA) HSP 1 Score: 133 bits (335), Expect = 2.400e-33 Identity = 75/156 (48.08%), Postives = 105/156 (67.31%), Query Frame = 1
Query: 1 LAPEAKNPAKHVPRALFASLLGVTIVCAMASVSLSGAESAPNLDADSAFAEAFRARGMTTAYKITAIGELATLPLVVLVSFMAQPRLLYAMAKDGLLPRAFAEVDSRGTLFKGSLISGGICMITALLVPFDSLNTLISAGVLLAFNFVTSSHLALR 468
LA EAK PAK++PRA+ ++ VT + +A+++L G ++ + S FAEAFRAR + + A+GEL TLPLVV VS +AQPRL +AMA+DGLLP +VD G LF G+L++G + AL +PF +L +ISAGVL+AFNF S+ + R
Sbjct: 341 LAGEAKQPAKNIPRAVMGTIGIVTFLYFVAALALVGMQNFSEISTSSGFAEAFRARNLLWIANVVAVGELLTLPLVVFVSLLAQPRLQFAMAQDGLLPAILGKVDKNGNLFFGTLVAGLTSVAIALFLPFGALEDVISAGVLIAFNFTNSALMVSR 496
BLAST of mRNA_E-fasciculatus_F_contig13830.2823.1 vs. uniprot
Match: A0A7S2IG81_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IG81_9STRA) HSP 1 Score: 133 bits (335), Expect = 2.780e-33 Identity = 77/156 (49.36%), Postives = 110/156 (70.51%), Query Frame = 1
Query: 1 LAPEAKNPAKHVPRALFASLLGVTIVCAMASVSLSGAESAPNLDADSAFAEAFRARGMTTAYKITAIGELATLPLVVLVSFMAQPRLLYAMAKDGLLPRAFAEVDSRGTLFKGSLISGGICMITALLVPFDSLNTLISAGVLLAFNFVTSSHLALR 468
LA EA+NP+ ++PR++ ASL+ VT++ A+++L+G + S+F +AFR RG +I+A+GE+ TLPLVVLV+ MAQPRL YAM+ DGLLP FA VDS G L+ G+LISG I ++ A VPF L+ LISAG+L+AF+ +S + +R
Sbjct: 354 LAGEAQNPSVNLPRSILASLVIVTVLYVAAALALTGMVPWEYISETSSFPDAFRYRGWELCAQISALGEIITLPLVVLVTIMAQPRLQYAMSIDGLLPPIFAHVDSTGNLWHGTLISGTIMVVIATCVPFTYLDDLISAGILVAFSMTDASVILIR 509 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13830.2823.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13830.2823.1 >prot_E-fasciculatus_F_contig13830.2823.1 ID=prot_E-fasciculatus_F_contig13830.2823.1|Name=mRNA_E-fasciculatus_F_contig13830.2823.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=156bp LAPEAKNPAKHVPRALFASLLGVTIVCAMASVSLSGAESAPNLDADSAFAback to top mRNA from alignment at E-fasciculatus_F_contig13830:78..2127+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13830.2823.1 ID=mRNA_E-fasciculatus_F_contig13830.2823.1|Name=mRNA_E-fasciculatus_F_contig13830.2823.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2050bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13830:78..2127+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13830:78..2127+ >mRNA_E-fasciculatus_F_contig13830.2823.1 ID=mRNA_E-fasciculatus_F_contig13830.2823.1|Name=mRNA_E-fasciculatus_F_contig13830.2823.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=936bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13830:78..2127+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |