mRNA_E-fasciculatus_F_contig1383.2822.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1383.2822.1
Unique NamemRNA_E-fasciculatus_F_contig1383.2822.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1383.2822.1 vs. uniprot
Match: D7FQX9_ECTSI (Exonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQX9_ECTSI)

HSP 1 Score: 565 bits (1457), Expect = 2.960e-198
Identity = 279/290 (96.21%), Postives = 287/290 (98.97%), Query Frame = 1
Query:   82 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRESARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFHFMKALRQAGVELIVAPYEADAQLAFLSRSGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYISTSVKGLGIATAYKLVDRHRSLDKIMGAINSSRFVIPEGYWDQYKRARLTFRHHIIYNPQSE 951
            MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRE+ARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAF  MKALRQAGVEL+VAPYEADAQLAFLSR+GAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYI +SVKGLGIATAYKLVDRHRSLDKI+GAINSSRFVIPEGYW+QYKRARLTFRHHIIYNP++E
Sbjct:    1 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRETARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFLLMKALRQAGVELVVAPYEADAQLAFLSRTGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYIPSSVKGLGIATAYKLVDRHRSLDKIIGAINSSRFVIPEGYWEQYKRARLTFRHHIIYNPETE 290          
BLAST of mRNA_E-fasciculatus_F_contig1383.2822.1 vs. uniprot
Match: A0A6H5JK90_9PHAE (Exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK90_9PHAE)

HSP 1 Score: 338 bits (868), Expect = 3.720e-113
Identity = 171/182 (93.96%), Postives = 172/182 (94.51%), Query Frame = 1
Query:   82 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRESARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFHFMKALRQAGVELIVAPYEADAQLAFLSRSGAVDVVLSEDSDCLPYGCKKV 627
            MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKR I LERRRQRESARSKGEA       GAAAQHFSKAVGVTHDMAFH MKALRQAGVELIVAPYEADAQLAFLSR+GAVDVVLSEDSDCLPYGCKKV
Sbjct:    1 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRRITLERRRQRESARSKGEAXXXXXXXGAAAQHFSKAVGVTHDMAFHLMKALRQAGVELIVAPYEADAQLAFLSRTGAVDVVLSEDSDCLPYGCKKV 182          
BLAST of mRNA_E-fasciculatus_F_contig1383.2822.1 vs. uniprot
Match: A0A836CAX1_9STRA (Exonuclease 1 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAX1_9STRA)

HSP 1 Score: 333 bits (855), Expect = 1.340e-110
Identity = 158/295 (53.56%), Postives = 222/295 (75.25%), Query Frame = 1
Query:   82 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRESARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFHFMKALRQAGVELIVAPYEADAQLAFLSRSGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYISTSVKGLGIATAYKLVDRHRSLDKIMGAINSSR-FVIPEGYWDQYKRARLTFRHHIIYNPQSEVGRC 963
            MGI+GLL  LKS+T+P H+ +  GL  GVDAYCWLHRGA+SC  E+C G  TDK+V FCM+R+ LLL HG+ P +VFDGA LP+K  +N  RR  R +  +K EAA+AAGE  AA QH++++V +TH++A  F+++L + G++ +VAPYEADAQLAF+S+ G +D +++EDSDCLP+ CK++LFK++N+G  QEI+ R+L++N   SL+ W  SMFLD+CLL GCDY+   V GLGI TA+KLV RHRS   ++ A+ +SR F +P+ + D+++ ARLTFRH  +Y+P+S   RC
Sbjct:    1 MGISGLLQTLKSITHPVHVRDLEGLTVGVDAYCWLHRGAYSCSTEICRGEFTDKFVRFCMRRIELLLSHGVTPWVVFDGAPLPMKHGVNKARRDARAANLAKAEAAMAAGEPIAAQQHYARSVAITHELARMFIRSLARRGIKFVVAPYEADAQLAFMSQQGLIDAIITEDSDCLPFCCKRMLFKLENDGSAQEIRARDLSSNENPSLAGWTYSMFLDMCLLAGCDYLPR-VHGLGIGTAHKLVARHRSHKPMLAALRASRKFALPDDFEDRFEMARLTFRHQRVYDPRS---RC 291          
BLAST of mRNA_E-fasciculatus_F_contig1383.2822.1 vs. uniprot
Match: W7TNX5_9STRA (Exonuclease 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNX5_9STRA)

HSP 1 Score: 330 bits (846), Expect = 5.820e-109
Identity = 159/291 (54.64%), Postives = 207/291 (71.13%), Query Frame = 1
Query:   82 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRESARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFHFMKALRQAGVELIVAPYEADAQLAFLSRSGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYISTSVKGLGIATAYKLVDRHRSLDKIMGAI---NSSRFVIPEGYWDQYKRARLTFRHHIIYNPQ 945
            MGI GLLP LKSVT+  H+ EY+G+ AG+DA+CWLHRGAF+C  EL  G  TDKY+ FCM+RV +L  +GI P MVFDGAS+P KR ++L RR  R  AR+K  A    G+ G A   F KAV +TH+MA+  +K L++A V  +VAPYEADAQLA+L+R G VD+V+SEDSD LPYGC +VLFK+D EG  QEI+ RNLA N       W  +MFLD+CLL GCDY+  ++ GLGI TA+KLV +HR+  K++GA+         +P  Y +++ RARLTFRHH +Y+P+
Sbjct:    1 MGIAGLLPLLKSVTHTVHLREYQGMMAGIDAFCWLHRGAFTCCTELVLGKTTDKYIRFCMERVRILQENGITPFMVFDGASIPAKRDLHLSRRAARTEARAKALAVHEEGQIGQARTLFQKAVIITHEMAYELIKCLQEANVRYMVAPYEADAQLAYLARKGVVDLVISEDSDTLPYGCPRVLFKLDKEGRAQEIERRNLALNEDYDFEGWTENMFLDMCLLAGCDYLP-NLPGLGIKTAHKLVRQHRTYKKVLGALATPGGKEMAVPGDYMERFARARLTFRHHYVYDPE 290          
BLAST of mRNA_E-fasciculatus_F_contig1383.2822.1 vs. uniprot
Match: D8RZD7_SELML (Exonuclease 1 n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RZD7_SELML)

HSP 1 Score: 276 bits (707), Expect = 2.420e-87
Identity = 133/290 (45.86%), Postives = 193/290 (66.55%), Query Frame = 1
Query:   82 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRESARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFHFMKALRQAGVELIVAPYEADAQLAFLSRSGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYISTSVKGLGIATAYKLVDRHRSLDKIMGAINSSRFVIPEGYWDQYKRARLTFRHHIIYNPQSE 951
            MGI GLLP LKS+T  T++ EY G++  VD Y WLH+ AFSC  ++C G AT  ++ +CM RVNLL HHGI+P++VFDG SLP+K     +R R RE          A+G   AA  H+ KAV +T ++A   +  LR+  VE IV+PYEADAQ+AFL+  G VD V++EDSD + YGC K+LFKMD  G G E+Q  +L  N  L+L+++   M L++C+L GCDY+  S++G+G+  A+ L+ R RS +K++  +  S  +IP+ Y + +++A LTF HH++Y+P  +
Sbjct:    1 MGIQGLLPALKSITTSTNVKEYSGMRVAVDTYSWLHKAAFSCSKDICDGRATASFLNYCMHRVNLLRHHGIKPLLVFDGGSLPMKAEQEEKRSRAREEHLKLARECEASGNHAAAYDHYQKAVDITPEVAHQLILVLRRENVEYIVSPYEADAQMAFLALRGVVDAVITEDSDLVAYGCPKILFKMDKNGQGFELQYADLVKNRDLNLTSFTKRMMLEMCILSGCDYLP-SLQGMGVKRAHNLIRRFRSYEKVIRHLKFSGVMIPKSYEEGFRKALLTFCHHLVYDPTQD 289          
BLAST of mRNA_E-fasciculatus_F_contig1383.2822.1 vs. uniprot
Match: A0A7S0QPV1_9CRYP (Exonuclease 1 (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QPV1_9CRYP)

HSP 1 Score: 271 bits (694), Expect = 6.730e-86
Identity = 136/296 (45.95%), Postives = 188/296 (63.51%), Query Frame = 1
Query:   82 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRESARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFHFMKALRQAGVELIVAPYEADAQLAFLSRSGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYISTSVKGLGIATAYKLVDRHRS--------LDKIMGAINSSRFVIPEGYWDQYKRARLTFRHHIIYNPQ 945
            MGI+GLLP L ++    H+S Y+G+K  VD Y WLHRGA+SC +ELCTG  TDKY+ +C+ RV LLLHHG+ PVM+FDGA LP K+     R+  RE  ++KG  AL +    AA ++F +AV +T  MA   +KALR+  VE IVAP+EADAQLA+L+  G V  V+SEDSD + +G   V+FKMD EGHG+E + + L A   L L+ W++  FL +C+  GCDY+  S+ GLGI  A+  +    S          K +  +     V+P  Y   ++RA LTFRH ++Y+P+
Sbjct:    1 MGISGLLPVLGNIMESKHVSVYKGMKVAVDTYGWLHRGAYSCSLELCTGAPTDKYITYCIDRVKLLLHHGVTPVMIFDGADLPSKKGTETNRKSSREEFKAKGLQALRSDNRAAAMEYFQRAVDITPRMAHRLIKALRKIKVECIVAPHEADAQLAYLNLKGYVQAVISEDSDIVAFGADTVMFKMDREGHGREYRRKLLGACDKLRLAGWEHERFLQMCIFAGCDYLK-SLNGLGIKRAHAAIQGDGSNRAAPEECYIKALTRLRLEGTVVPPTYQADFRRAYLTFRHQLVYDPE 295          
BLAST of mRNA_E-fasciculatus_F_contig1383.2822.1 vs. uniprot
Match: A9RHQ3_PHYPA (Exonuclease 1 n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RHQ3_PHYPA)

HSP 1 Score: 267 bits (683), Expect = 6.850e-85
Identity = 129/287 (44.95%), Postives = 185/287 (64.46%), Query Frame = 1
Query:   82 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRESARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFHFMKALRQAGVELIVAPYEADAQLAFLSRSGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYISTSVKGLGIATAYKLVDRHRSLDKIMGAINSSRFVIPEGYWDQYKRARLTFRHHIIYNP 942
            MGI GLLP LKS+  P HI +Y G +  +D Y WLH+ AFSC  ELC G+  DKY+ +CM RVN+L H G+QPV+VFDG  LP+K    ++R R R+    +       G   AA Q + +AV +T  +AF  +K LRQ  VE +VAPYEADAQ+AFL+R+G VD+V++EDSD + YGC ++ FKMD  G G   Q  ++ AN  +  +N+   M L++C++ GCDY+  S+ G+G+  A+ L+ R ++  K+M  +  S  +I E Y   ++RA LTF+HH +Y+P
Sbjct:    1 MGIQGLLPTLKSIMNPRHIRDYAGKRVAIDTYSWLHKAAFSCSKELCLGLPNDKYIDYCMHRVNMLRHFGLQPVLVFDGGGLPMKSDQEMKRARSRKENLERALEHERLGNFTAAMQCYQRAVDITPAIAFRLIKVLRQENVEYVVAPYEADAQMAFLARNGHVDLVITEDSDLIAYGCPQIFFKMDKYGQGVGFQFSDITANKDIDFNNFSRQMILEMCIMSGCDYLP-SLPGMGVKKAHGLMKRFKTYIKVMKHLKFSGVLIDEQYEQGFRRAILTFQHHRVYDP 286          
BLAST of mRNA_E-fasciculatus_F_contig1383.2822.1 vs. uniprot
Match: UPI000D1C6787 (exonuclease 1 n=5 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C6787)

HSP 1 Score: 276 bits (707), Expect = 8.540e-85
Identity = 133/290 (45.86%), Postives = 193/290 (66.55%), Query Frame = 1
Query:   82 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRESARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFHFMKALRQAGVELIVAPYEADAQLAFLSRSGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYISTSVKGLGIATAYKLVDRHRSLDKIMGAINSSRFVIPEGYWDQYKRARLTFRHHIIYNPQSE 951
            MGI GLLP LKS+T  T++ EY G++  VD Y WLH+ AFSC  ++C G AT  ++ +CM RVNLL HHGI+P++VFDG SLP+K     +R R RE          A+G   AA  H+ KAV +T ++A   +  LR+  VE IV+PYEADAQ+AFL+  G VD V++EDSD + YGC K+LFKMD  G G E+Q  +L  N  L+L+++   M L++C+L GCDY+  S++G+G+  A+ L+ R RS +K++  +  S  +IP+ Y + +++A LTF HH++Y+P  +
Sbjct:    1 MGIQGLLPALKSITTSTNVKEYSGMRVAVDTYSWLHKAAFSCSKDICDGRATASFLNYCMHRVNLLRHHGIKPLLVFDGGSLPMKAEQEEKRSRAREEHLKLARECEASGNHAAAYDHYQKAVDITPEVAHQLILVLRRENVEYIVSPYEADAQMAFLALRGVVDAVITEDSDLVAYGCPKILFKMDKNGQGFELQYADLVKNRDLNLTSFTKRMMLEMCILSGCDYLP-SLQGMGVKRAHNLIRRFRSYEKVIRHLKFSGVMIPKSYEEGFRKALLTFCHHLVYDPTQD 289          
BLAST of mRNA_E-fasciculatus_F_contig1383.2822.1 vs. uniprot
Match: W4H3P1_9STRA (Exonuclease 1 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H3P1_9STRA)

HSP 1 Score: 271 bits (694), Expect = 7.330e-84
Identity = 145/292 (49.66%), Postives = 192/292 (65.75%), Query Frame = 1
Query:   82 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRESARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFHFMKALRQAGVELIVAPYEADAQLAFLSRSGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYISTSVKGLGIATAYKLVDRHRSLDKIMGAIN-SSRFVIPEGYWDQYKRARLTFRHHIIYNPQSEV 954
            MGI+ LLP LKS+T  T +  Y+G    VD Y WLHRGA+SC  ELC G+ TD+YV + M+RV LL+  GI P +VFDG  LP+K+    ERR  RE  R  G A L A +   A Q F KAV V+  MA   ++ L++ GV+ IVAPYEADAQ+A+L R+GAVD V+SEDSDCLPYGC  VLFKMD  G+ + IQ  +LA NT LS   + + MFLD+C+L GCDY++ S+ GLG+  ++ L+ R+ S  K++ A+    +  I + Y     RARLTFRH  +Y+P S+ 
Sbjct:    1 MGISNLLPQLKSITKSTTLHAYKGKTVAVDGYVWLHRGAYSCSQELCLGLDTDRYVGYFMERVGLLIKCGIIPYIVFDGGYLPMKKLKEDERRLSREKHREAGLAYLKANKLDLARQSFVKAVDVSPSMAHRVIQRLQETGVKYIVAPYEADAQMAYLVRTGAVDAVISEDSDCLPYGCHHVLFKMDTPGNVEVIQAAHLALNTTLSFVGFTDDMFLDMCILSGCDYVA-SIPGLGVKKSHGLMLRYGSYQKVVRALRLEGKLPITKTYEADVARARLTFRHQRVYDPVSQT 291          
BLAST of mRNA_E-fasciculatus_F_contig1383.2822.1 vs. uniprot
Match: A0A1V9YDM5_9STRA (Exonuclease 1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YDM5_9STRA)

HSP 1 Score: 270 bits (690), Expect = 9.760e-84
Identity = 140/292 (47.95%), Postives = 194/292 (66.44%), Query Frame = 1
Query:   82 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRESARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFHFMKALRQAGVELIVAPYEADAQLAFLSRSGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYISTSVKGLGIATAYKLVDRHRSLDKIMGAIN-SSRFVIPEGYWDQYKRARLTFRHHIIYNPQSEV 954
            MGI+ LLP LKS+T PT++  YRG    VD YCWLHRG +SC  ELC G  +DKY+ + M+RV+ LL  GI P +VFDG  LP+K+    ERR  RE  R+ G   L      AA Q F KAV V+  MA   +++L++  V+ +VAPYEADAQ+A+L+R+G VD V+SEDSDCLP+GC  VLFKMDN GH  EI+L +LA N  LS   + + MFLD+C+L GCDY++ S+ GLG+  ++ L+ R+ +  K++ A+    +  I + Y     +ARLTFRH  +Y+P+++ 
Sbjct:    1 MGISNLLPQLKSITTPTNLEAYRGKTVAVDGYCWLHRGVYSCSQELCLGQGSDKYINYFMERVDHLLTCGIIPYIVFDGGYLPMKKLKEEERRSGREKHRTAGLQHLENKNYEAARQCFVKAVDVSPYMAHRVIQSLKKRKVQYVVAPYEADAQMAYLARAGLVDAVISEDSDCLPFGCPTVLFKMDNTGHVDEIRLADLAKNKALSFVGFNDDMFLDMCILSGCDYVA-SIPGLGVKKSHGLLQRYGTWQKVVRALRLEGKLAITKSYEADVTQARLTFRHQRVYDPRTKT 291          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1383.2822.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQX9_ECTSI2.960e-19896.21Exonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A6H5JK90_9PHAE3.720e-11393.96Exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
A0A836CAX1_9STRA1.340e-11053.56Exonuclease 1 (Fragment) n=1 Tax=Tribonema minus T... [more]
W7TNX5_9STRA5.820e-10954.64Exonuclease 1 n=1 Tax=Nannochloropsis gaditana Tax... [more]
D8RZD7_SELML2.420e-8745.86Exonuclease 1 n=1 Tax=Selaginella moellendorffii T... [more]
A0A7S0QPV1_9CRYP6.730e-8645.95Exonuclease 1 (Fragment) n=1 Tax=Cryptomonas curva... [more]
A9RHQ3_PHYPA6.850e-8544.95Exonuclease 1 n=1 Tax=Physcomitrium patens TaxID=3... [more]
UPI000D1C67878.540e-8545.86exonuclease 1 n=5 Tax=Selaginella moellendorffii T... [more]
W4H3P1_9STRA7.330e-8449.66Exonuclease 1 n=1 Tax=Aphanomyces astaci TaxID=112... [more]
A0A1V9YDM5_9STRA9.760e-8447.95Exonuclease 1 n=1 Tax=Achlya hypogyna TaxID=120277... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1383contigE-fasciculatus_F_contig1383:14352..18144 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score568.5
Seed ortholog evalue2e-159
Seed eggNOG ortholog2880.D7FQX9
KEGG koko:K10746
KEGG Pathwayko03430,map03430
EggNOG free text desc.5'-3' exodeoxyribonuclease activity
EggNOG OGsCOG0258@1,KOG2518@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03032,ko03400
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHelix-hairpin-helix motif, class 2
Ec32 orthologEc-09_003340.1
Exons8
Model size979
Cds size978
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1383.2822.1prot_E-fasciculatus_F_contig1383.2822.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1383 14352..18144 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927877.082673-CDS-E-fasciculatus_F_contig1383:14351..145331622927877.082673-CDS-E-fasciculatus_F_contig1383:14351..14533Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1383 14352..14533 +
1695995733.962394-CDS-E-fasciculatus_F_contig1383:14351..145331695995733.962394-CDS-E-fasciculatus_F_contig1383:14351..14533Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1383 14352..14533 +
1622927877.100076-CDS-E-fasciculatus_F_contig1383:15232..152921622927877.100076-CDS-E-fasciculatus_F_contig1383:15232..15292Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1383 15233..15292 +
1695995733.973921-CDS-E-fasciculatus_F_contig1383:15232..152921695995733.973921-CDS-E-fasciculatus_F_contig1383:15232..15292Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1383 15233..15292 +
1622927877.1181061-CDS-E-fasciculatus_F_contig1383:15584..157041622927877.1181061-CDS-E-fasciculatus_F_contig1383:15584..15704Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1383 15585..15704 +
1695995733.982789-CDS-E-fasciculatus_F_contig1383:15584..157041695995733.982789-CDS-E-fasciculatus_F_contig1383:15584..15704Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1383 15585..15704 +
1622927877.1347919-CDS-E-fasciculatus_F_contig1383:16057..161811622927877.1347919-CDS-E-fasciculatus_F_contig1383:16057..16181Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1383 16058..16181 +
1695995733.993211-CDS-E-fasciculatus_F_contig1383:16057..161811695995733.993211-CDS-E-fasciculatus_F_contig1383:16057..16181Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1383 16058..16181 +
1622927877.1505542-CDS-E-fasciculatus_F_contig1383:16720..168581622927877.1505542-CDS-E-fasciculatus_F_contig1383:16720..16858Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1383 16721..16858 +
1695995734.0032287-CDS-E-fasciculatus_F_contig1383:16720..168581695995734.0032287-CDS-E-fasciculatus_F_contig1383:16720..16858Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1383 16721..16858 +
1622927877.162636-CDS-E-fasciculatus_F_contig1383:17147..172491622927877.162636-CDS-E-fasciculatus_F_contig1383:17147..17249Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1383 17148..17249 +
1695995734.0123253-CDS-E-fasciculatus_F_contig1383:17147..172491695995734.0123253-CDS-E-fasciculatus_F_contig1383:17147..17249Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1383 17148..17249 +
1622927877.1748261-CDS-E-fasciculatus_F_contig1383:17533..176441622927877.1748261-CDS-E-fasciculatus_F_contig1383:17533..17644Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1383 17534..17644 +
1695995734.02158-CDS-E-fasciculatus_F_contig1383:17533..176441695995734.02158-CDS-E-fasciculatus_F_contig1383:17533..17644Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1383 17534..17644 +
1622927877.1962373-CDS-E-fasciculatus_F_contig1383:18003..181441622927877.1962373-CDS-E-fasciculatus_F_contig1383:18003..18144Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1383 18004..18144 +
1695995734.0306258-CDS-E-fasciculatus_F_contig1383:18003..181441695995734.0306258-CDS-E-fasciculatus_F_contig1383:18003..18144Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1383 18004..18144 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1383.2822.1

>prot_E-fasciculatus_F_contig1383.2822.1 ID=prot_E-fasciculatus_F_contig1383.2822.1|Name=mRNA_E-fasciculatus_F_contig1383.2822.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=326bp
ADRVLTLHALRCNQASSPVCHRVRWARMGITGLLPFLKSVTYPTHISEYR
GLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQP
VMVFDGASLPIKRSINLERRRQRESARSKGEAALAAGEAGAAAQHFSKAV
GVTHDMAFHFMKALRQAGVELIVAPYEADAQLAFLSRSGAVDVVLSEDSD
CLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLV
GCDYISTSVKGLGIATAYKLVDRHRSLDKIMGAINSSRFVIPEGYWDQYK
RARLTFRHHIIYNPQSEVGRCSFGV*
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mRNA from alignment at E-fasciculatus_F_contig1383:14352..18144+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1383.2822.1 ID=mRNA_E-fasciculatus_F_contig1383.2822.1|Name=mRNA_E-fasciculatus_F_contig1383.2822.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3793bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1383:14352..18144+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GCTGATCGCGTTTTGACGTTGCATGCATTGCGTTGTAACCAAGCGAGCTC TCCCGTGTGTCACCGTGTTCGCTGGGCGAGAATGGGGATCACTGGCCTCC TTCCGTTTCTGAAGAGTGTCACCTACCCGACTCATATCAGCGAGTATCGT GGTCTCAAAGCTGGGGTGGATGCCTACTGCTGGTAAGAGGCAACATCCAG ACGCGCTGCGTAGACAGGTCTCCCACTGCATAGTCCACTGCGCGTTGCTT TAAACACTGCAGCAGGTTTCAAACTGGTTGTCCCATGCGTCTCGCGTAAA CGTTAGGTTCCTGGCTGTCAAATCAGGATATTGAACATACGCATATTTGA CGGCGCATACGCAAATCCACCAACCGTATTTTTCAAATTTTTGAACCGAC GCGGGTAGCCGTGTCCCTCCCTCTCCTGTTGTCGGAGCAAGTGTTCCGCC TCACCGGTGATAAGAAAGGGAGTGTCCATACAGGTTGCTGGTTCTACGGT TTTTACAATGCATATGTTTTCATCTTCATTTTTGGGGACGTCATGTGATG CGCAACCTACCATAAGCATCGTGGTATAAGAGTGTAGGTGCATGTCCGAG CGGGTTGACGTGCCTTGCTTGCCGTGTTACAACGCTCAAATAAAACTCCA CTGCTTCCCCTGACTGCCGTGTGTGCGCTACTGGCATGTAAACGTCTTTC TTCCTCTCTCTTCGCACGGGCATTGGTAAACGGTCGTGTGTTTTCCCTCC TCTGCATCTACATGCGACACACATGATATCTACTGAAGAGACTCTTGAAG GGTGCGGTCGTATGTTTCAATTGGTATGTTTTGTCTGTCAACAAAACGTT CGTGTCCACTTTGTGCTGGTTGCAAGAGCAGGCTTCATCGTGGCGCTTTT AGCTGCGGGATGGAGCTCTGCACTGGTGTGGCCACCGACAAGTGAGAGTT TTGTGATGCGAGGGCGCTGTGGAAAAATAGTCTAGTGTACAGAGTTTTGG GAAGCAGCGCATCCACCGGCATCCACCGGCATGTTCATTGCCCAGGCAAT CGAACAGAAAAATGGGGTGTCACCCGGCGATGGGATGGGGACGGAAGCAA CGAAGGCCTCTATCGCTTGAGTTTGAATCACTGTTGTTGGCCTCGGGTGA CGATGGTGCGCGCTATATTCAGCTCCAGACCCTTCATCTTTCACCCCCTT TTCACTCAATCCTCCGTCCTCACTTACGCTTAGGTACGTCGCTTTCTGTA TGAAGCGTGTGAACCTTCTACTGCACCACGGGATCCAGCCCGTCATGGTG TTCGATGGCGCAAGCCTCCCCATAAAAAGGAGCATAAATCTGGAGCGCCG GAGGTGGGGTACATTTGCATGTTGGTATACCTTTTTGTGACTCAGGCGAC ATGGGCTGCGCCGTTTTAGGAGTAAAACGAGGAGCTATGCATACGTTGCC TTGGGAACCATGTCGTTTACAACGCCGAGGGCTTGCTCATTGCGATCGCG ATAAACGAAATATTATGGTAGCCCGCGCGTGCACACCGAGATGTTGGGGC GGGGTGGTACGACCATGGATGCCCAACTAATGTCACAAAGACAGAGGATC CTCCTGCCACTGCTGCTCATCGTCAGCGGTCACAACTCTAAGTAGAACCG CAGCTGAGCGGCTCGAACCTTTTATCTCTCTCCATATATTAATGCTTCGA TGCCAGACAGAGAGAGTCGGCGAGGAGCAAGGGTGAGGCAGCTCTAGCGG CGGGAGAAGCGGGCGCAGCTGCCCAACACTTCTCCAAGGCCGTCGGAGTG ACGCACGACATGGCCTTCCACTTCATGAAGGTGATACCGACCTGTTGTGT TGATTTGCGCTGTGAACAGTTTTGTATCTGGAGCTTGTGCACAGCTCCAT TTGGTTATTTCAGTAACGTACCTGGAGCGTCCATCCATCAGACAGCACAC CTTCGTCTACATGTTGAGCGCCTCTTTAGGAGCGCGTCGATGTTCGAGCG CTTGCACTGATCATGGAGTACGAGCCATCTGATCGACGTGCTTTTCTGTA ATGAAACGGAGGATAGCTGTGTTTGCGGCAGCAAAGTTGCATCACCTCGC TTTGCTACCGTGCGCTGTACTCTCCTGCTGCATATGACCCTTGCGATAAG TACTCTGGCGCAAGCAGAGCACATCAGATCCAAACGTTTCGCGGCGTTGC ACACGGCCCAGCCATTCCTGAGCTAATATTGTAGTCACTATACTGTTCAT ATAGACATGGCTTCTTTCTCGAGGATTGACCGGACCCCGACCACCAAGCC TCCAACTAACGCACAACATGATTTTATTTGATACTTTTGATTCAATCTGT ATGGACGTGTTTGATGCAGGCGTTGCGACAAGCAGGGGTAGAGCTCATCG TGGCGCCGTACGAAGCAGATGCACAGCTGGCGTTCCTCAGCCGAAGTGGT GCTGTGGATGTTGTGCTATCGGAGGATTCCGATTGCCTTCCTTATGGGTG CAAGAAGGTAATGTCGATGGTAGGGGTCTGCTAAGCGTCCACCCTCGTGG GCATGGGGATGTTCACGCGACCCTGGACGCGACTAACTAGATTGCTGGTG TCGCTTAGTGCGTTGCGCGCATGTTTTTCTGGTCCGAAGTTGTGCTCTTT CCTGCCGGCTGCAAGGTGACATGCTTAGGGTGCAGACAGCAGTGAGTCGC AAGCGCATGACCCTCATAGGTGCTGTTCATTCCTGCCGATTGCAAGGTGA CATGCGTAGGGTACAGACAGCAGCGAGTCGTGCGTGACCCTCACAGGTGC TGTTCAAGATGGACAACGAGGGCCACGGGCAAGAAATTCAGCTGAGAAAT CTCGCTGCAAACACGCCGCTTTCGTTGAGCAACTGGAAGAACAGCATGGT GAGCCGAGAATCGTTGAGGGTGATGTTTCAAGTTCTTCAATGGCGCTCGA TGCTAATAGTGTGCATGATTCCACTCTGTGCGGGAGCTGGTGCGAAGCAC TCGAAAAGGATGTCCCGCTTGCTGAGTCTAGGTAGCTGAGATGCACACGA CAACATCATGATGGGCCTGAAAAAACGAAATGGATATTGCATCCAAATTG CACACCACATCCATCGCACAAGCAGTGAATGTAAGTTGTTTTCAGTTGTC CCTCCCGTGCGTGCTTGCAATTGTCCTCACAGTTTTTGGATCTCTGTCTT CTGGTGGGCTGTGACTACATATCTACTTCCGTGAAAGGTCTGGGCATTGC AACAGCATACAAGCTCGTCGATAGACATCGGAGCCTGGACAAGGTAGGCA GCCGCAATCACGCGTCCAATGGATCCATTGGTGGCTGAGACTTACTACCG CAACACATCACATTGTCGAGACAACCGTTGGGCACGACGCTCATATCTGG ACACCGACTATGAACAATTGGTTGCATTGATTTCGATCCAGGGGTCCCTC CCTCATGGTGAGCCTGTCTGTAACGAAGTTCGAATCAACTCACATATGAG TCTGCAAGTACGAGCAAGTACGAGCACTGAACTAAGTCAGCATTTGCAAG GTGGGCTCTTTTTTATATCGTACTTGAAAGCCCCGCCCGTTGAGAAGTTG GCTGAGGTGCATGTTTCCTTGATGCATATGCTTCTTTCACCCTCGTTTAC AGATAATGGGCGCCATCAACTCCTCAAGGTTCGTCATACCAGAGGGATAC TGGGACCAATACAAGAGGGCGCGATTGACTTTTCGACATCACATCATCTA CAACCCGCAGTCTGAGGTAGGACGTTGTTCGTTCGGTGTTTAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1383:14352..18144+

>mRNA_E-fasciculatus_F_contig1383.2822.1 ID=mRNA_E-fasciculatus_F_contig1383.2822.1|Name=mRNA_E-fasciculatus_F_contig1383.2822.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1956bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1383:14352..18144+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GCTGATCGCGTTTTGACGTTGCATGCATTGCGTTGTAACCAAGCGAGCTC
TCCCGTGTGTCACCGTGTTCGCTGGGCGAGAATGGGGATCACTGGCCTCC
TTCCGTTTCTGAAGAGTGTCACCTACCCGACTCATATCAGCGAGTATCGT
GGTCTCAAAGCTGGGGTGGATGCCTACTGCTGGCTGATCGCGTTTTGACG
TTGCATGCATTGCGTTGTAACCAAGCGAGCTCTCCCGTGTGTCACCGTGT
TCGCTGGGCGAGAATGGGGATCACTGGCCTCCTTCCGTTTCTGAAGAGTG
TCACCTACCCGACTCATATCAGCGAGTATCGTGGTCTCAAAGCTGGGGTG
GATGCCTACTGCTGGCTTCATCGTGGCGCTTTTAGCTGCGGGATGGAGCT
CTGCACTGGTGTGGCCACCGACAAGCTTCATCGTGGCGCTTTTAGCTGCG
GGATGGAGCTCTGCACTGGTGTGGCCACCGACAAGTACGTCGCTTTCTGT
ATGAAGCGTGTGAACCTTCTACTGCACCACGGGATCCAGCCCGTCATGGT
GTTCGATGGCGCAAGCCTCCCCATAAAAAGGAGCATAAATCTGGAGCGCC
GGAGGTACGTCGCTTTCTGTATGAAGCGTGTGAACCTTCTACTGCACCAC
GGGATCCAGCCCGTCATGGTGTTCGATGGCGCAAGCCTCCCCATAAAAAG
GAGCATAAATCTGGAGCGCCGGAGACAGAGAGAGTCGGCGAGGAGCAAGG
GTGAGGCAGCTCTAGCGGCGGGAGAAGCGGGCGCAGCTGCCCAACACTTC
TCCAAGGCCGTCGGAGTGACGCACGACATGGCCTTCCACTTCATGAAGAC
AGAGAGAGTCGGCGAGGAGCAAGGGTGAGGCAGCTCTAGCGGCGGGAGAA
GCGGGCGCAGCTGCCCAACACTTCTCCAAGGCCGTCGGAGTGACGCACGA
CATGGCCTTCCACTTCATGAAGGCGTTGCGACAAGCAGGGGTAGAGCTCA
TCGTGGCGCCGTACGAAGCAGATGCACAGCTGGCGTTCCTCAGCCGAAGT
GGTGCTGTGGATGTTGTGCTATCGGAGGATTCCGATTGCCTTCCTTATGG
GTGCAAGAAGGCGTTGCGACAAGCAGGGGTAGAGCTCATCGTGGCGCCGT
ACGAAGCAGATGCACAGCTGGCGTTCCTCAGCCGAAGTGGTGCTGTGGAT
GTTGTGCTATCGGAGGATTCCGATTGCCTTCCTTATGGGTGCAAGAAGGT
GCTGTTCAAGATGGACAACGAGGGCCACGGGCAAGAAATTCAGCTGAGAA
ATCTCGCTGCAAACACGCCGCTTTCGTTGAGCAACTGGAAGAACAGCATG
GTGCTGTTCAAGATGGACAACGAGGGCCACGGGCAAGAAATTCAGCTGAG
AAATCTCGCTGCAAACACGCCGCTTTCGTTGAGCAACTGGAAGAACAGCA
TGTTTTTGGATCTCTGTCTTCTGGTGGGCTGTGACTACATATCTACTTCC
GTGAAAGGTCTGGGCATTGCAACAGCATACAAGCTCGTCGATAGACATCG
GAGCCTGGACAAGTTTTTGGATCTCTGTCTTCTGGTGGGCTGTGACTACA
TATCTACTTCCGTGAAAGGTCTGGGCATTGCAACAGCATACAAGCTCGTC
GATAGACATCGGAGCCTGGACAAGATAATGGGCGCCATCAACTCCTCAAG
GTTCGTCATACCAGAGGGATACTGGGACCAATACAAGAGGGCGCGATTGA
CTTTTCGACATCACATCATCTACAACCCGCAGTCTGAGGTAGGACGTTGT
TCGTTCGGTGTTTAGATAATGGGCGCCATCAACTCCTCAAGGTTCGTCAT
ACCAGAGGGATACTGGGACCAATACAAGAGGGCGCGATTGACTTTTCGAC
ATCACATCATCTACAACCCGCAGTCTGAGGTAGGACGTTGTTCGTTCGGT
GTTTAG
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