mRNA_E-fasciculatus_F_contig1382.2814.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1382.2814.1
Unique NamemRNA_E-fasciculatus_F_contig1382.2814.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1382.2814.1 vs. uniprot
Match: A0A6H5JW93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW93_9PHAE)

HSP 1 Score: 276 bits (705), Expect = 2.680e-77
Identity = 335/426 (78.64%), Postives = 350/426 (82.16%), Query Frame = 1 
Query:   31 RLRANLRGSEGAIFDLICAGASMKQWTEWLRAPLEHAVAAGKMDLVVQLAEAGAGAIAVHSAVKRGQEAVVAELLRLGASPEEPDENDDPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARAHLTTRFGDEDRSAMDCAAYFGHVDIMKMLIQHGVDVNGAGATGMTPLHIAAAQAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGGEDDNTGFTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCETPLHLATKLESSEAVAILLRH--GADANKLNGDQYAALHLAAEGGSAAIVHALLAEGAQPNLRGGEDGKTALDLATVGGHADTVTALLLHRASLNSTDKL 1302
            RLR  L G+E AIFDLICAGAS++ W EWLR PLEHAVAAGK DLVVQLA+AGAG IAVHSAV+RGQE VVAELLRLGASP EPDE+ D P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS  A L  RFGDEDRSAMD  AY GHVD+M+ML QHGVDV   GA  MTPLHIAAAQAQ   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  LR GEDD  G   XXXXXXXXXXXXXXXXXXXXX                       E  A +++H    DAN +NGDQ++AL LAAEGGSAAIVH LLAEGAQPNLRGGEDGKTALDLATVGGHA+ VTALLLHR SLN  DKL
Sbjct:   15 RLRTILTGAEAAIFDLICAGASIEPWAEWLRTPLEHAVAAGKTDLVVQLAQAGAGGIAVHSAVRRGQEVVVAELLRLGASPGEPDESGDTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTHADLILRFGDEDRSAMDNTAYVGHVDLMRMLKQHGVDVCDVGAACMTPLHIAAAQAQVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNLRAGEDDQMGLXXXXXXXXXXXXXXXXXXXXXXX-----------------------EVDAQMVQHVKHPDANNVNGDQFSALQLAAEGGSAAIVHVLLAEGAQPNLRGGEDGKTALDLATVGGHAEAVTALLLHRPSLNVMDKL 417
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1382.2814.1 vs. uniprot
Match: D7FJ89_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ89_ECTSI)

HSP 1 Score: 241 bits (615), Expect = 1.700e-64
Identity = 317/423 (74.94%), Postives = 333/423 (78.72%), Query Frame = 1 
Query:   31 RLRANLRGSEGAIFDLICAGASMKQWTEWLRAPLEHAVAAGKMDLVVQLAEAGAGAIAVHSAVKRGQEAVVAELLRLGASPEEPDENDDPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARAHLTTRFGDEDRSAMDCAAYFGHVDIMKMLIQHGVDVNGAGATGMTPLHIAAAQAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGGEDDNTGFTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCETPLHLATKLESSEAVAILLRHGADANKLNGDQYAALHLAAEGGSAAIVHALLAEGAQPNLRGGEDGKTALDLATVGGHADTVTALLLHRASLNSTDK 1299
            RLR  L G+E AIFDLICAGAS++QW EWLR PLEHAVAAGKMDLVVQLA+AGAG IAVHSAV+RGQEAVVAELLRLGASP EPDE+ D P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         SA A L  RFG  D+SAMDCAAYFG+V+I++ L QHGVDVN AGATGMTPLHIAAAQA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  LR GEDD  G T XXXXXXXXXXXXXXXXXXXXXXXXXXXX   ETPLHLATKLESS+ VAILL+ GADANKLNGDQ++AL                             GK                  LLHR SLN+TDK
Sbjct:   15 RLRTILTGAEAAIFDLICAGASIEQWAEWLRTPLEHAVAAGKMDLVVQLAQAGAGGIAVHSAVRRGQEAVVAELLRLGASPGEPDESGDTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAAVEALVSAHADLNLRFGGRDQSAMDCAAYFGNVEIIRTLNQHGVDVNDAGATGMTPLHIAAAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNLRAGEDDKAGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMRETPLHLATKLESSQGVAILLQRGADANKLNGDQFSALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKXXXXXXXXXXXXXXXXXXLLHRPSLNATDK 437
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1382.2814.1 vs. uniprot
Match: D7FJ34_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ34_ECTSI)

HSP 1 Score: 208 bits (530), Expect = 1.120e-52
Identity = 277/361 (76.73%), Postives = 291/361 (80.61%), Query Frame = 1 
Query:   34 LRANLRGSEGAIFDLICAGASMKQWTEWLRAPLEHAVAAGKMDLVVQLAEAGAGAIAVHSAVKRGQEAVVAELLRLGASPEEPDENDDPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARAHLTTRFGDEDRSAMDCAAYFGHVDIMKMLIQHGVDVNGAGATGMTPLHIAAAQAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGGEDDNTGFTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCETPLHLATKLESSEAVAILLRHGADANKLNGDQYAAL 1116
            LR  L GSE AIFDLI    S++QW EWLR PLEHAVA G MDLVV+LA+AGA   AVH AV++G EAVVAELLRLGASP EPDE+ D PLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           SA A  T RFGDE++SAMDCA  FGHV IM+ LIQHGV VN AGAT +TPLHIAA +A        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   LR G  DNT    XXXXXXXXXXXXXXXXXXXXXXX      TCETPLHLATKL SSEAVA LL+H ADANKLNGDQY+AL
Sbjct:    8 LRTILSGSEAAIFDLIFGTTSIQQWAEWLRTPLEHAVAEGDMDLVVKLAQAGASRSAVHLAVRQGHEAVVAELLRLGASPSEPDESGDTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGSLAAVEALVSANADHTVRFGDEEKSAMDCAVCFGHVHIMRALIQHGVGVNDAGATSITPLHIAADRALLPAIQVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPNLRAGTGDNTXXXXXXXXXXXXXXXXXXXXXXXXXXXDVQGGETCETPLHLATKLGSSEAVASLLKHEADANKLNGDQYSAL 368
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1382.2814.1 vs. uniprot
Match: A0A6H5K8F3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8F3_9PHAE)

HSP 1 Score: 177 bits (448), Expect = 1.260e-42
Identity = 156/383 (40.73%), Postives = 180/383 (47.00%), Query Frame = 1 
Query:    1 MAESAFSLPCR-LRANLRGSEGAIFDLICAGASMKQWTEWLRAPLEHAVAAGKMDLVVQLAEAGAGAIAVHSAVKRGQEAVVAELLRLGASPEEPDENDDPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARAHLTTRFGDEDRSAMDCAAYFGHVDIMKMLIQHGVDVNGAGATGM----------TPLHIAAAQAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGGEDDNTGFTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCETPLHLATKLESSEAVAILLRHGADANKLNGDQYAAL 1116
            MAES  S     LRA L G+E  IFDLICAGAS++QWTEWL+ P +HAVAAGK+DL+VQLA+AGAG I+VHSAV+RG                EPDE+ D PL                                                 SA A+L+ RFGD+D SAMD AAYFGHVD+M++LIQHG+D + AGATG           TPLH+A   A                                                                                  LR GED+ T    XXXXXXXXXXXXXXXXXXXXXX       TCETPLHLATKLE   AV ILL H AD NK+NG+QY+AL
Sbjct:    1 MAESTSSSSTESLRAILTGAEAVIFDLICAGASIEQWTEWLQTPFQHAVAAGKIDLIVQLAQAGAGGISVHSAVRRG----------------EPDESGDTPLHIAASLGHHSILTLLLLQEAEVNALDGEDSAPLHVEAEQGSLAAVEALVSAHANLSLRFGDDDLSAMDRAAYFGHVDVMRVLIQHGIDQSDAGATGADVGAEDCGGDTPLHLAVRSASVDTMAALLRHGADANRVNGDQLSALHLAAKSSAVAMVYSLLAASAHPN---------------------------------LRAGEDEKTDLXXXXXXXXXXXXXXXXXXXXXXXXVDAQGGATCETPLHLATKLEPLNAVVILLAHKADPNKMNGNQYSAL 334
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1382.2814.1 vs. uniprot
Match: A0A6H5L7B7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7B7_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 2.060e-34
Identity = 149/352 (42.33%), Postives = 167/352 (47.44%), Query Frame = 1 
Query:   34 LRANLRGSEGAIFDLICAGASMKQWTEWLRAPLEHAVAAGKMDLVVQLAEAG-AGA--IAVHSAVKRGQEAVVAELLRLGASPEEPDENDDPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARAHLTTRFGDEDRSAMDCAAYFGHVDIMKMLIQHGVDVNGAGATGMTPLHIAAAQAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGGEDDNTGFTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCETPLHLATKLESSEAVAILLRHGAD 1080
            +R  L+GS+GAIFDL+CAGAS +QWTEWLR P+E+AVAAG +DLVV+LA+AG AGA   A+ SAV+RG +A             EPDE  + PL                                                 SA A L  RFGD D S MDCAA FG+VD+M  L QHGV VN A ATGMTPLHIAA QAQ                    XXXXXXXXXXXXXXXXXXX                                           + G  D T  TAXXXXXXX                      TCETPLHLATKL SS+AVAILL H AD
Sbjct:   14 IRTILQGSDGAIFDLLCAGASNQQWTEWLRTPVEYAVAAGNLDLVVKLAQAGQAGARNSAMPSAVRRGHDA-------------EPDERGNTPLHIAASLGHDAINALLLLQKAAVNSLDGEDRTPLHLAAGKDSLAGVKALVSAHADLRLRFGDADESPMDCAACFGYVDMMLTLTQHGVGVNDAAATGMTPLHIAAGQAQLPAIDALVEAEANVGAEEYGXXXXXXXXXXXXXXXXXXXCLLRHGADANKLNGDRLSALHLA-------------------AKDGAADMTSLTAXXXXXXXKDTGVIDALVEAGAEVDAQGGETCETPLHLATKLGSSDAVAILLTHDAD 333
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1382.2814.1 vs. uniprot
Match: A0A6H5L6J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6J8_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 6.020e-32
Identity = 77/102 (75.49%), Postives = 83/102 (81.37%), Query Frame = 1 
Query: 1000 TCETPLHLATKLESSEAVAILLRHGADANKLNGDQYAALHLAAEGGSAAIVHALLAEGAQPNLRGGEDGKTALDLATVGGHADTVTALLLHRASLNSTDKLG 1305
            TCETPLHLATKL SSEAVA LL+  AD NKLNGDQY+ALHL      AAIVH LLA GAQPNLRGGEDGKTALDLA +G H +  TAL+ HRASLN+TDKLG
Sbjct:  167 TCETPLHLATKLGSSEAVASLLKLEADENKLNGDQYSALHLXXXXXXAAIVHVLLATGAQPNLRGGEDGKTALDLAALGRHVEAATALVQHRASLNATDKLG 268
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1382.2814.1 vs. uniprot
Match: D7FJ91_ECTSI (Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ91_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 4.760e-13
Identity = 41/49 (83.67%), Postives = 45/49 (91.84%), Query Frame = 1 
Query:  157 MDLVVQLAEAGAGAIAVHSAVKRGQEAVVAELLRLGASPEEPDENDDPP 303
            MDLVVQLA+AGAG +AVHSAV+RGQEAVVAELLRLGASP EPDE+ D P
Sbjct:    1 MDLVVQLAQAGAGGVAVHSAVRRGQEAVVAELLRLGASPGEPDESGDTP 49
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1382.2814.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 1.390e-9
Identity = 109/193 (56.48%), Postives = 131/193 (67.88%), Query Frame = 1 
Query:   46 LRGSEGAIFDLICAGASMKQWTEWLRAPLEHAVAAGKMDLVVQLAEAGA--GAIAVHSAVKRGQEAVVAELLRLGASPEEPDENDDPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARAHLTTRFGDEDRSAMDCAAYFGHVDIMKMLIQHGVDVNGAGATGMTPLHIAA 618
            L+G E  + DL+       + +EWL APLE AVA G   L  +L +AGA  G +A+H AV+RG  A+   LL  GAS  + +++   P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     LT R  + D S +D AA    V+I++MLI HG++VN A A G T LH AA
Sbjct:   19 LKGEEERVLDLMLDTRCPHEMSEWLAAPLESAVARGDEGLAQKLVQAGAKIGGVALHEAVRRGHIAIAELLLENGASVHDDEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLNEFDMSFLDFAASSQDVEILRMLIDHGMEVNLAAAFG-TALHWAA 210
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1382.2814.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 4.210e-7
Identity = 101/189 (53.44%), Postives = 128/189 (67.72%), Query Frame = 1 
Query:   46 LRGSEGAIFDLICAGASMKQWTEWLRAPLEHAVAAGKMDLVVQLAEAGA--GAIAVHSAVKRGQEAVVAELLRLGASPEEPDENDDPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARAHLTTRFGDEDRSAMDCAAYFGHVDIMKMLIQHGVDVNGAGATGMTPL 606
            ++G    + DL+       + +EWL APLE AV +G   L  +L +AGA  G +A+H  V+RG  A+   LL  GAS  + +++   P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     LT R  + + SA+D AA   HV+I++MLI HG++V+ A + G T L
Sbjct:   22 MKGEGQRVLDLMFDTRWPHEMSEWLAAPLESAVVSGHEGLARKLVQAGAKVGGVALHETVRRGHIAMAELLLENGASVHDDEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLTEFEVSALDFAALSDHVEIVRMLIDHGMEVHRANSDGRTAL 210
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1382.2814.1 vs. uniprot
Match: D7FM65_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM65_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 3.730e-6
Identity = 34/87 (39.08%), Postives = 48/87 (55.17%), Query Frame = 1 
Query:   37 RANLRGSEGAIFDLICAGASMKQWTEWLRAPLEHAVAAGKMDLVVQLAEAGAGAIA----------VHSAVKRGQEAVVAELLRLGA 267
            ++ L G+   I DL+C  A+ +QWT+WLR PLEHA   G   LV +L + GA A A          +H+  + G E V++ L R GA
Sbjct:    8 KSTLHGTGDMILDLVCDLATPRQWTKWLRVPLEHAAGTGNAALVEKLLKVGANASAGWRGCDGRTLMHAGAEGGSEQVISMLTRAGA 94
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1382.2814.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5JW93_9PHAE2.680e-7778.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJ89_ECTSI1.700e-6474.94Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7FJ34_ECTSI1.120e-5276.73Ankyrin repeat protein n=2 Tax=Ectocarpus siliculo... [more]
A0A6H5K8F3_9PHAE1.260e-4240.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7B7_9PHAE2.060e-3442.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L6J8_9PHAE6.020e-3275.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJ91_ECTSI4.760e-1383.67Chain A, 4ank: A Designed Ankyrin Repeat Protein W... [more]
D7G137_ECTSI1.390e-956.48Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7G1U1_ECTSI4.210e-753.44Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7FM65_ECTSI3.730e-639.08Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ecto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1382contigE-fasciculatus_F_contig1382:7576..10014 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score254.6
Seed ortholog evalue1.6e-64
Seed eggNOG ortholog2880.D7FGP5
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAnkyrin-repeat protein
Ec32 orthologEc-12_008430.1
Exons1
Model size2439
Cds size2439
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927876.0709481-CDS-E-fasciculatus_F_contig1382:7575..100141622927876.0709481-CDS-E-fasciculatus_F_contig1382:7575..10014Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1382 7576..10014 +
1695995733.392536-CDS-E-fasciculatus_F_contig1382:7575..100141695995733.392536-CDS-E-fasciculatus_F_contig1382:7575..10014Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1382 7576..10014 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1382.2814.1prot_E-fasciculatus_F_contig1382.2814.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1382 7576..10014 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1382.2814.1

>prot_E-fasciculatus_F_contig1382.2814.1 ID=prot_E-fasciculatus_F_contig1382.2814.1|Name=mRNA_E-fasciculatus_F_contig1382.2814.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=813bp
MAESAFSLPCRLRANLRGSEGAIFDLICAGASMKQWTEWLRAPLEHAVAA
GKMDLVVQLAEAGAGAIAVHSAVKRGQEAVVAELLRLGASPEEPDENDDP
PLHIAVRHGHHGILAILLLQKADVDALDGEDRAPLHIAAKEGSLAGVAAL
VSARAHLTTRFGDEDRSAMDCAAYFGHVDIMKMLIQHGVDVNGAGATGMT
PLHIAAAQAQVPATQVLVEAGADVRAEDGEGATPLHLAARTASVDVVAIL
LRYEADANKLNGDRLSPLHLAAKGGPADMVQALLAAEAQPNLRGGEDDNT
GFTALHMAISNKNVGVIDALVAAGAEIDLEGGETCETPLHLATKLESSEA
VAILLRHGADANKLNGDQYAALHLAAEGGSAAIVHALLAEGAQPNLRGGE
DGKTALDLATVGGHADTVTALLLHRASLNSTDKLGRTAMHSAASNNNVAA
IDVLAAAGANVDARDKECWTPLHCAASEGYAEAVTALMRHGSGGNPFNAE
DESPLHLAAREGECATLTALLVGGANPNLLNREGESPLYLATYFTKLDLL
KVLTQHGANVKGIGPDGVTALHTAVAQEDVEVVEALIAAGAEVEAEDKDG
GTPLHAALRSGCSENAAVLLRCGADPTKRTANDRGLIHEAAQGGSASCVE
LVLTTGADVNLRDDEESTALHVAAYYSTSVVEKLLQHGADPDAGDSTGRT
ALHKATESYNGSVTIDALVDGGAAIEARDINGRTPLHAAAYRHMRAAMKA
LLRSGADVLARDNEGRSALHLAIDGGIDLADVRAPVDLLLRWGADETAKD
DGDESQDGRSPGE
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mRNA from alignment at E-fasciculatus_F_contig1382:7576..10014+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1382.2814.1 ID=mRNA_E-fasciculatus_F_contig1382.2814.1|Name=mRNA_E-fasciculatus_F_contig1382.2814.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2439bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1382:7576..10014+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGCTGAGAGTGCCTTTTCTTTACCATGCCGGCTTCGGGCCAACTTGCG
AGGGTCCGAGGGCGCCATCTTCGACCTCATCTGTGCCGGGGCCTCCATGA
AGCAGTGGACAGAGTGGCTTCGGGCTCCGTTGGAGCATGCTGTGGCTGCG
GGCAAGATGGATCTCGTTGTCCAGCTCGCCGAAGCGGGAGCGGGAGCCAT
TGCTGTGCACTCGGCTGTGAAGCGAGGCCAGGAGGCGGTCGTTGCGGAGC
TGCTCAGGCTGGGGGCATCGCCAGAAGAGCCGGATGAGAATGACGATCCT
CCTCTCCACATCGCTGTCCGTCACGGTCATCACGGCATCCTTGCGATACT
TCTACTTCAGAAGGCTGACGTCGATGCGCTTGATGGCGAGGACCGTGCGC
CTCTTCATATAGCAGCTAAAGAAGGCTCTCTTGCTGGTGTCGCAGCTCTT
GTTTCTGCCCGCGCACATCTTACCACCCGTTTCGGCGATGAAGACAGATC
GGCGATGGATTGTGCTGCGTACTTCGGTCATGTGGACATAATGAAGATGC
TGATCCAACACGGGGTTGATGTAAATGGTGCTGGCGCTACCGGTATGACC
CCCTTACACATCGCTGCCGCTCAAGCCCAAGTTCCCGCGACTCAGGTGCT
TGTGGAGGCTGGGGCCGACGTCCGCGCGGAGGATGGAGAGGGTGCCACAC
CGCTGCATCTGGCGGCAAGGACTGCTTCAGTCGATGTGGTGGCTATTTTG
TTGCGCTACGAGGCGGACGCAAACAAGCTGAACGGTGATCGACTCTCCCC
TCTCCACCTGGCTGCCAAGGGTGGCCCCGCTGACATGGTACAAGCACTCC
TGGCTGCGGAAGCCCAGCCAAACCTTCGCGGTGGCGAGGATGATAACACG
GGCTTCACCGCTCTGCATATGGCGATCTCCAACAAGAATGTGGGTGTGAT
CGACGCACTTGTTGCGGCCGGTGCTGAGATTGATCTAGAGGGAGGTGAAA
CATGCGAGACACCGTTGCACCTGGCGACCAAGCTTGAGTCATCAGAAGCA
GTGGCCATTCTCTTGCGGCACGGAGCTGACGCCAACAAGCTGAACGGCGA
CCAGTACGCTGCTCTTCACCTGGCCGCTGAGGGCGGCAGCGCCGCCATCG
TTCATGCACTCCTGGCCGAGGGTGCACAGCCAAACCTTCGTGGTGGTGAG
GACGGAAAGACCGCGTTGGACCTTGCCACGGTTGGGGGGCATGCTGACAC
GGTGACAGCTTTACTCCTGCACCGGGCTAGCTTGAATTCGACGGACAAGC
TTGGCCGTACTGCCATGCACTCTGCTGCCTCCAACAACAATGTGGCAGCC
ATCGATGTTCTGGCCGCCGCCGGGGCTAACGTGGACGCGAGGGACAAGGA
GTGCTGGACGCCTCTCCATTGCGCGGCATCTGAAGGGTACGCTGAAGCTG
TCACGGCGCTTATGAGGCACGGGAGTGGCGGCAACCCTTTCAACGCCGAG
GACGAATCGCCGCTCCACCTTGCAGCTCGTGAAGGTGAATGTGCTACACT
GACCGCCCTCTTGGTCGGCGGTGCGAATCCCAACCTCCTCAACAGGGAAG
GTGAGTCTCCGTTGTACCTGGCTACCTATTTTACGAAACTGGATCTGCTC
AAGGTGCTTACTCAACACGGGGCCAACGTGAAGGGTATTGGACCCGATGG
CGTTACGGCCTTGCACACTGCTGTTGCCCAGGAAGATGTCGAGGTAGTTG
AAGCGCTGATCGCTGCAGGGGCCGAGGTCGAGGCGGAGGACAAAGACGGG
GGTACTCCTCTTCATGCAGCTCTACGTTCGGGGTGCTCTGAAAACGCCGC
CGTTCTGCTTAGGTGTGGCGCCGATCCAACGAAACGGACGGCCAATGACC
GGGGCCTCATTCACGAGGCCGCCCAAGGAGGTAGCGCGTCCTGCGTAGAA
CTAGTTCTCACGACTGGTGCGGATGTCAATCTTCGTGACGACGAGGAATC
CACGGCACTGCACGTGGCTGCTTATTATTCTACCTCAGTTGTGGAGAAGC
TACTCCAACACGGCGCGGACCCGGATGCTGGAGATTCGACTGGTCGCACG
GCACTGCACAAGGCCACCGAGAGCTACAACGGATCCGTTACGATCGATGC
CCTCGTTGACGGAGGTGCTGCGATCGAGGCCCGCGACATTAACGGTAGAA
CCCCCCTTCATGCCGCCGCTTACCGCCACATGCGCGCAGCAATGAAGGCC
CTTCTCCGGAGCGGTGCCGACGTCCTTGCGAGAGACAATGAGGGACGCTC
AGCATTACACCTTGCAATTGATGGCGGGATTGATCTGGCAGACGTTCGCG
CCCCTGTGGATCTTCTGTTGAGATGGGGTGCAGATGAAACCGCCAAGGAC
GACGGAGATGAGTCGCAGGACGGCCGGAGCCCGGGAGAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1382:7576..10014+

>mRNA_E-fasciculatus_F_contig1382.2814.1 ID=mRNA_E-fasciculatus_F_contig1382.2814.1|Name=mRNA_E-fasciculatus_F_contig1382.2814.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4878bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1382:7576..10014+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGCTGAGAGTGCCTTTTCTTTACCATGCCGGCTTCGGGCCAACTTGCG
AGGGTCCGAGGGCGCCATCTTCGACCTCATCTGTGCCGGGGCCTCCATGA
AGCAGTGGACAGAGTGGCTTCGGGCTCCGTTGGAGCATGCTGTGGCTGCG
GGCAAGATGGATCTCGTTGTCCAGCTCGCCGAAGCGGGAGCGGGAGCCAT
TGCTGTGCACTCGGCTGTGAAGCGAGGCCAGGAGGCGGTCGTTGCGGAGC
TGCTCAGGCTGGGGGCATCGCCAGAAGAGCCGGATGAGAATGACGATCCT
CCTCTCCACATCGCTGTCCGTCACGGTCATCACGGCATCCTTGCGATACT
TCTACTTCAGAAGGCTGACGTCGATGCGCTTGATGGCGAGGACCGTGCGC
CTCTTCATATAGCAGCTAAAGAAGGCTCTCTTGCTGGTGTCGCAGCTCTT
GTTTCTGCCCGCGCACATCTTACCACCCGTTTCGGCGATGAAGACAGATC
GGCGATGGATTGTGCTGCGTACTTCGGTCATGTGGACATAATGAAGATGC
TGATCCAACACGGGGTTGATGTAAATGGTGCTGGCGCTACCGGTATGACC
CCCTTACACATCGCTGCCGCTCAAGCCCAAGTTCCCGCGACTCAGGTGCT
TGTGGAGGCTGGGGCCGACGTCCGCGCGGAGGATGGAGAGGGTGCCACAC
CGCTGCATCTGGCGGCAAGGACTGCTTCAGTCGATGTGGTGGCTATTTTG
TTGCGCTACGAGGCGGACGCAAACAAGCTGAACGGTGATCGACTCTCCCC
TCTCCACCTGGCTGCCAAGGGTGGCCCCGCTGACATGGTACAAGCACTCC
TGGCTGCGGAAGCCCAGCCAAACCTTCGCGGTGGCGAGGATGATAACACG
GGCTTCACCGCTCTGCATATGGCGATCTCCAACAAGAATGTGGGTGTGAT
CGACGCACTTGTTGCGGCCGGTGCTGAGATTGATCTAGAGGGAGGTGAAA
CATGCGAGACACCGTTGCACCTGGCGACCAAGCTTGAGTCATCAGAAGCA
GTGGCCATTCTCTTGCGGCACGGAGCTGACGCCAACAAGCTGAACGGCGA
CCAGTACGCTGCTCTTCACCTGGCCGCTGAGGGCGGCAGCGCCGCCATCG
TTCATGCACTCCTGGCCGAGGGTGCACAGCCAAACCTTCGTGGTGGTGAG
GACGGAAAGACCGCGTTGGACCTTGCCACGGTTGGGGGGCATGCTGACAC
GGTGACAGCTTTACTCCTGCACCGGGCTAGCTTGAATTCGACGGACAAGC
TTGGCCGTACTGCCATGCACTCTGCTGCCTCCAACAACAATGTGGCAGCC
ATCGATGTTCTGGCCGCCGCCGGGGCTAACGTGGACGCGAGGGACAAGGA
GTGCTGGACGCCTCTCCATTGCGCGGCATCTGAAGGGTACGCTGAAGCTG
TCACGGCGCTTATGAGGCACGGGAGTGGCGGCAACCCTTTCAACGCCGAG
GACGAATCGCCGCTCCACCTTGCAGCTCGTGAAGGTGAATGTGCTACACT
GACCGCCCTCTTGGTCGGCGGTGCGAATCCCAACCTCCTCAACAGGGAAG
GTGAGTCTCCGTTGTACCTGGCTACCTATTTTACGAAACTGGATCTGCTC
AAGGTGCTTACTCAACACGGGGCCAACGTGAAGGGTATTGGACCCGATGG
CGTTACGGCCTTGCACACTGCTGTTGCCCAGGAAGATGTCGAGGTAGTTG
AAGCGCTGATCGCTGCAGGGGCCGAGGTCGAGGCGGAGGACAAAGACGGG
GGTACTCCTCTTCATGCAGCTCTACGTTCGGGGTGCTCTGAAAACGCCGC
CGTTCTGCTTAGGTGTGGCGCCGATCCAACGAAACGGACGGCCAATGACC
GGGGCCTCATTCACGAGGCCGCCCAAGGAGGTAGCGCGTCCTGCGTAGAA
CTAGTTCTCACGACTGGTGCGGATGTCAATCTTCGTGACGACGAGGAATC
CACGGCACTGCACGTGGCTGCTTATTATTCTACCTCAGTTGTGGAGAAGC
TACTCCAACACGGCGCGGACCCGGATGCTGGAGATTCGACTGGTCGCACG
GCACTGCACAAGGCCACCGAGAGCTACAACGGATCCGTTACGATCGATGC
CCTCGTTGACGGAGGTGCTGCGATCGAGGCCCGCGACATTAACGGTAGAA
CCCCCCTTCATGCCGCCGCTTACCGCCACATGCGCGCAGCAATGAAGGCC
CTTCTCCGGAGCGGTGCCGACGTCCTTGCGAGAGACAATGAGGGACGCTC
AGCATTACACCTTGCAATTGATGGCGGGATTGATCTGGCAGACGTTCGCG
CCCCTGTGGATCTTCTGTTGAGATGGGGTGCAGATGAAACCGCCAAGGAC
GACGGAGATGAGTCGCAGGACGGCCGGAGCCCGGGAGAGATGGCTGAGAG
TGCCTTTTCTTTACCATGCCGGCTTCGGGCCAACTTGCGAGGGTCCGAGG
GCGCCATCTTCGACCTCATCTGTGCCGGGGCCTCCATGAAGCAGTGGACA
GAGTGGCTTCGGGCTCCGTTGGAGCATGCTGTGGCTGCGGGCAAGATGGA
TCTCGTTGTCCAGCTCGCCGAAGCGGGAGCGGGAGCCATTGCTGTGCACT
CGGCTGTGAAGCGAGGCCAGGAGGCGGTCGTTGCGGAGCTGCTCAGGCTG
GGGGCATCGCCAGAAGAGCCGGATGAGAATGACGATCCTCCTCTCCACAT
CGCTGTCCGTCACGGTCATCACGGCATCCTTGCGATACTTCTACTTCAGA
AGGCTGACGTCGATGCGCTTGATGGCGAGGACCGTGCGCCTCTTCATATA
GCAGCTAAAGAAGGCTCTCTTGCTGGTGTCGCAGCTCTTGTTTCTGCCCG
CGCACATCTTACCACCCGTTTCGGCGATGAAGACAGATCGGCGATGGATT
GTGCTGCGTACTTCGGTCATGTGGACATAATGAAGATGCTGATCCAACAC
GGGGTTGATGTAAATGGTGCTGGCGCTACCGGTATGACCCCCTTACACAT
CGCTGCCGCTCAAGCCCAAGTTCCCGCGACTCAGGTGCTTGTGGAGGCTG
GGGCCGACGTCCGCGCGGAGGATGGAGAGGGTGCCACACCGCTGCATCTG
GCGGCAAGGACTGCTTCAGTCGATGTGGTGGCTATTTTGTTGCGCTACGA
GGCGGACGCAAACAAGCTGAACGGTGATCGACTCTCCCCTCTCCACCTGG
CTGCCAAGGGTGGCCCCGCTGACATGGTACAAGCACTCCTGGCTGCGGAA
GCCCAGCCAAACCTTCGCGGTGGCGAGGATGATAACACGGGCTTCACCGC
TCTGCATATGGCGATCTCCAACAAGAATGTGGGTGTGATCGACGCACTTG
TTGCGGCCGGTGCTGAGATTGATCTAGAGGGAGGTGAAACATGCGAGACA
CCGTTGCACCTGGCGACCAAGCTTGAGTCATCAGAAGCAGTGGCCATTCT
CTTGCGGCACGGAGCTGACGCCAACAAGCTGAACGGCGACCAGTACGCTG
CTCTTCACCTGGCCGCTGAGGGCGGCAGCGCCGCCATCGTTCATGCACTC
CTGGCCGAGGGTGCACAGCCAAACCTTCGTGGTGGTGAGGACGGAAAGAC
CGCGTTGGACCTTGCCACGGTTGGGGGGCATGCTGACACGGTGACAGCTT
TACTCCTGCACCGGGCTAGCTTGAATTCGACGGACAAGCTTGGCCGTACT
GCCATGCACTCTGCTGCCTCCAACAACAATGTGGCAGCCATCGATGTTCT
GGCCGCCGCCGGGGCTAACGTGGACGCGAGGGACAAGGAGTGCTGGACGC
CTCTCCATTGCGCGGCATCTGAAGGGTACGCTGAAGCTGTCACGGCGCTT
ATGAGGCACGGGAGTGGCGGCAACCCTTTCAACGCCGAGGACGAATCGCC
GCTCCACCTTGCAGCTCGTGAAGGTGAATGTGCTACACTGACCGCCCTCT
TGGTCGGCGGTGCGAATCCCAACCTCCTCAACAGGGAAGGTGAGTCTCCG
TTGTACCTGGCTACCTATTTTACGAAACTGGATCTGCTCAAGGTGCTTAC
TCAACACGGGGCCAACGTGAAGGGTATTGGACCCGATGGCGTTACGGCCT
TGCACACTGCTGTTGCCCAGGAAGATGTCGAGGTAGTTGAAGCGCTGATC
GCTGCAGGGGCCGAGGTCGAGGCGGAGGACAAAGACGGGGGTACTCCTCT
TCATGCAGCTCTACGTTCGGGGTGCTCTGAAAACGCCGCCGTTCTGCTTA
GGTGTGGCGCCGATCCAACGAAACGGACGGCCAATGACCGGGGCCTCATT
CACGAGGCCGCCCAAGGAGGTAGCGCGTCCTGCGTAGAACTAGTTCTCAC
GACTGGTGCGGATGTCAATCTTCGTGACGACGAGGAATCCACGGCACTGC
ACGTGGCTGCTTATTATTCTACCTCAGTTGTGGAGAAGCTACTCCAACAC
GGCGCGGACCCGGATGCTGGAGATTCGACTGGTCGCACGGCACTGCACAA
GGCCACCGAGAGCTACAACGGATCCGTTACGATCGATGCCCTCGTTGACG
GAGGTGCTGCGATCGAGGCCCGCGACATTAACGGTAGAACCCCCCTTCAT
GCCGCCGCTTACCGCCACATGCGCGCAGCAATGAAGGCCCTTCTCCGGAG
CGGTGCCGACGTCCTTGCGAGAGACAATGAGGGACGCTCAGCATTACACC
TTGCAATTGATGGCGGGATTGATCTGGCAGACGTTCGCGCCCCTGTGGAT
CTTCTGTTGAGATGGGGTGCAGATGAAACCGCCAAGGACGACGGAGATGA
GTCGCAGGACGGCCGGAGCCCGGGAGAG
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