mRNA_E-fasciculatus_F_contig1382.2813.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1382.2813.1 vs. uniprot
Match: D7FJ92_ECTSI (ER membrane protein complex subunit 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ92_ECTSI) HSP 1 Score: 1238 bits (3204), Expect = 0.000e+0 Identity = 650/685 (94.89%), Postives = 659/685 (96.20%), Query Frame = 1
Query: 1 GGGGCALAGGVSASGKTFVASASMLQGGPADKVVVSVAEVTAFGDFTAALVDSFETSSPGLGGAASGRIEGAFLEAGEQGFRVLVVSEDDSAQMVGRGGVEWVREEALAAADQARNLFFVVFVDSSKDELSILAASAGEEVDHDVPGWRERLRLHRLELTSLVGRSLYAATGLRLPGSEFLDSADASHSAFGLKKLAVCTTAAGKTYALDMADGSVTWSLFRPSWIPSDAKVLLHATRSKGALGYSPEVAVIAVGDVKTVVSGLDALTGLETYREELDLKVESAVPLGVKDGQERNIIMLVDSHRQVHAVPRSVEASSALRGLLPQLFYHSLSETGLESFSVVPSATADGSDMDEGPLGSATVASVPFNPTRSKVVATAYPDRRDGVQTPAHTLGDDSLLIKYINPRLFAFATLSPEEAESEEGAGGDARQLNSKGQELTVTLVDYVSGRVLHRISHKGASEPVHMQVSESWVVYSYWSAVSHRTEMSTLSLYEGMIDKYGLSPFNRPEWKEEFSSFESRVPIVLQKTFIFPLPVTALGITLTQYGITSKNILVGTAVGQVVSLDRRFLDPRRPQEEPNKAEKEEKLIQYQPYLPVVPTQVLSYHKVIERVNRVLTEPTGLESTSLVLALGLDIFGARVAPSKTYDMLDPNFNYALLALVLGAMATAVAVANRMAAHKRLSEQWA 2055
GGGGCALAGGVSASGKTFVASASMLQGGP DKV+VSVAEVTAFGDFTAALVDSFETSSPGLGGAASGRIEGAFLEAGEQGFRVLVVSEDDSAQMVGRGGVEWVREEALAAADQ VVFVDSSKDEL+ILAAS GEEVDHDVPGWRERLRL RLELTSLVGRSLYAATGLRLPGSE LDSADASHSAFGLKKLAVCTTAAGK YALDMADGSVTWSLFRPSW+PS AKVLLHATRSKGALGYSPEVAVIAVG+ KTVVSGLDALTGLETYREELDLKV+SAVPLGVKDGQERNIIMLVDSHRQVHAVPRS EASSALRGLLPQLFYHSLSETGLESFSVVPSAT SD DEGPLGSATVASVPFNPTRSKVVATAYPD RDGVQTPAHTLGDDSLLIKYINPRLFAFATL PEEAESEE AGGDA QLN KGQELTVTLVDYVSGRVLHRISHKGA+EPVHMQVSESWVVYSYWSAVSHRTEMSTLSLYEGMIDKYGLSPFNRPEWKEEFSSFESRVPIVLQKTFIFPLPVTALGITLTQYGITSKNILVGTA+GQVVSLDRRFLDPRRPQEEP K EKEEKLIQYQPYLPVVPTQVLSYHKVIERV+RVLTEPTGLESTSLVLALGLDIFGARVAPSKTYDMLDPNFNYALLALVLGAMATAV VANR+AAHKRLSEQWA
Sbjct: 385 GGGGCALAGGVSASGKTFVASASMLQGGPVDKVIVSVAEVTAFGDFTAALVDSFETSSPGLGGAASGRIEGAFLEAGEQGFRVLVVSEDDSAQMVGRGGVEWVREEALAAADQ------VVFVDSSKDELAILAASVGEEVDHDVPGWRERLRLDRLELTSLVGRSLYAATGLRLPGSELLDSADASHSAFGLKKLAVCTTAAGKIYALDMADGSVTWSLFRPSWMPSGAKVLLHATRSKGALGYSPEVAVIAVGEAKTVVSGLDALTGLETYREELDLKVDSAVPLGVKDGQERNIIMLVDSHRQVHAVPRSAEASSALRGLLPQLFYHSLSETGLESFSVVPSATGGDSDKDEGPLGSATVASVPFNPTRSKVVATAYPDGRDGVQTPAHTLGDDSLLIKYINPRLFAFATLCPEEAESEEWAGGDAGQLNGKGQELTVTLVDYVSGRVLHRISHKGAAEPVHMQVSESWVVYSYWSAVSHRTEMSTLSLYEGMIDKYGLSPFNRPEWKEEFSSFESRVPIVLQKTFIFPLPVTALGITLTQYGITSKNILVGTAIGQVVSLDRRFLDPRRPQEEPTKTEKEEKLIQYQPYLPVVPTQVLSYHKVIERVDRVLTEPTGLESTSLVLALGLDIFGARVAPSKTYDMLDPNFNYALLALVLGAMATAVGVANRLAAHKRLSEQWA 1063
BLAST of mRNA_E-fasciculatus_F_contig1382.2813.1 vs. uniprot
Match: A0A835YVX9_9STRA (ER membrane protein complex subunit 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVX9_9STRA) HSP 1 Score: 358 bits (919), Expect = 1.180e-106 Identity = 258/716 (36.03%), Postives = 360/716 (50.28%), Query Frame = 1
Query: 244 RVLVVSEDDSAQMVGRGG--------VEWVREEALAAADQARNLFFVVFVDSSKDELSILAASAGEEVDHDVPGWRERLRLHRLELTSLVGRSLYAATGLRLPGSEFLDSADASHSAFGLKKLAVCTTAAGKTYALDMADGSVTWSLFRPSWIPSDAKVLLH--ATRSKGALGYSPEVAVI---AVGDVKTVVSGLDALTGLETYRE-ELDLKVESAVPLGVKDGQERN---------------IIMLVDSHRQVHAVPRSVEASSALRGLLPQLFYHSLSETGLESFSVVPSA--------TADGSDMDEGPLGSATVASVPFNPTRSKVVATAYPDRRDGVQTPAHTLGDDSLLIKYINPRLFAFATLSPEEAESEEGAGGDARQL------------NSKGQELTVTLVD-------------------------YVSGRVLHRISHKGASEPVHMQVSESWVVYSYWSAVSHRTEMSTLSLYEGMIDKYGLSPFNRPEWKEEFSSFESRVPIVLQKTFIFPLPVTALGITLTQYGITSKNILVGTAVGQVVSLDRRFLDPRRPQEEPNKAEKEEKLIQYQPYLPVVPTQVLSYHKVIERVNRVLTEPTGLESTSLVLALGLDIFG--------------------------------------ARVAPSKTYDMLDPNFNYALLALVLGAMATAVAVANRMAAHKRLSEQWA 2055
+ LV+S D SA ++ RGG WVREEALA+ + V FVD + D++ +H +P +RERL LH EL R + G G+ A + FGL KLA+ T++GK A+ G + WS P PS V ATR + LGY+PE A+I A G V+ + DA+TG + L V S VPL V D + R ++MLVD ++V P + E ++ L+P LF+H+L + GLE+F+V P DG + S V + VVATAYP RR+ +Q+PA LGDDSLL+KY+NP L A AT+ P++ S+ GA D + G L + LVD VSGRVL+R+ +GA PVH +SE+ VV ++WS + RTE+ +LSLYEGMI +YGL P +P+ FSSF++ P+VL + + P VTALG+ LT +GIT+K+++ G + LDRR+LDPRRP EP+ AEK+E+L+Q+QP+LPV VL+Y + R +R++T PTGLESTS++LA GL+++G RV PSKT+D+L PNFNY LL +V+ +A A K+L QWA
Sbjct: 421 QALVLSADASAALLRRGGSSGDGALATAWVREEALASVES------VDFVDHTVDDVL---------KEHHIPTYRERLELHWAELKGAAERGVAFVKG----GAATAAPAGPP-AGFGLSKLAIAVTSSGKLCAISSVTGDIVWSKLLP---PSGGGVARRVVATRPRSVLGYAPEFALITADAEGGVE--LEWYDAVTGAASGAPLRLAGGVASVVPLDVHDAEGRQXXXXXXXXXXXXXXXVLMLVDGQKRVTLAPATREVYASAAPLIPSLFHHTLGDEGLETFAVAPLTPELQLQLEVEDGDKWTPPSMASLPVGRASWG--GEAVVATAYPLRREAIQSPAQVLGDDSLLLKYLNPHLAAVATM-PKQQRSDSGAKRDVVATLTLRPSGRWCAKSDVGARLALWLVDTVVLTAPLMSAXXXXXXXXXXXXXXXVSGRVLYRLETQGAGLPVHCSISENNVVCTHWSVHARRTEVLSLSLYEGMIGRYGLGPTRQPQRAAHFSSFDAPPPVVLHRAYTLPHAVTALGLPLTSHGITAKSLVAALDGGLLFLLDRRWLDPRRPVAEPSAAEKDERLVQWQPFLPVSRQAVLTYGGEVARASRIVTAPTGLESTSVLLATGLELWGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMFCTRVTPSKTFDLLAPNFNYGLLLMVIVGLAAGNVALRAAAKRKKLMAQWA 1108
BLAST of mRNA_E-fasciculatus_F_contig1382.2813.1 vs. uniprot
Match: A0A7S2DLI3_9STRA (ER membrane protein complex subunit 1 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DLI3_9STRA) HSP 1 Score: 342 bits (876), Expect = 4.290e-101 Identity = 231/638 (36.21%), Postives = 337/638 (52.82%), Query Frame = 1
Query: 241 FRVLVVSEDDSAQMVGRGGVEWVREEALAAADQARNLFFVVFVDSSKDELSILAASAGEEVDHDVPGWRERLRLHRLELTSLVGRSLYAATGLRLPGSEFLDSADASHSAFGLKKLAVCTTAAGKTYALDMADGSVTWSLFRPSWIPSDAKVLLHATRSKGALGYSPEVAVI----AVGDVK---TVVSGLDALTGLETYREELDLKVESAVPLGVKDGQERNIIMLV---DSHRQVHAVPRSVEASSALRGLLPQLFYHSLSETG--LESFSVVPSATADGSDMDEGPLGSATVASVPFNPTRSKVVA---------TAYPDRRDGVQTPAHTLGDDSLLIKYINPRLFAFATLSPEEAESEEGAGGDARQLNSKGQE-------------LTVTLVDYVSGRVLHRISHKGASEPVHMQVSESWVVYSYWSAVSHRTEMSTLSLYEGMIDKYGLSPFNRPEWKEEFSSFESRVPIVLQKTFIFPLPVTALGITLTQYGITSKNILVGTAVGQVVSLDRRFLDPRRPQEEPNKAEKEEKLIQYQPYLPVVPTQVLSYHKVIERVNRVLTEPTGLESTSLVLALGLDIFGARVAPSKTYDMLDPNFNYALLALVLGAMATAVAVANRMAAHKRLSEQW 2052
+R+L+ +EDDS V G W REEAL++ +++ F + +S DE +++AA A + RL+L V + + T L G + + + G K+AVC T +G+ LD+ DGS+ W +P V++ TR G PEV +I +V K T ++ +DAL G T L L V PL D Q R + + + ++ R V S EA + L +LF+H + LES V ++D G + ++ P + VVA Y D V TPA LGDDSLL+KY+N L A T++ S E D + G L V+LVD V+GR+LHR+ H AS P HM +SE+WVVYSYW+ +HRTE+STLSLYEG+ID++GL+PF PE ++ F+S + P+V+Q+T+IFP +T+L T+T GITSKN+L+ GQV+SL RRFLDPRRP P AEK E L QY LPV+P +++ ++ + + P +ESTSLV A+G+D++ R +PSKT+D+L +FN +L +LG +ATA+ +R+ A+KRL + W
Sbjct: 415 YRMLLTTEDDSVAFVDPGKTLWFREEALSSI---QSMAFFSPLAASSDEKALIAAEAVNGA------FMNRLQLQGQHFYKTV--TSFVTTEHDLLGHDGFSAE--MRTKLGFDKVAVCRTRSGRLIGLDVVDGSIRWGRL----LPKGYSVVV--TRPDAIAGLRPEVMLIRPQSSVAATKLATTSITYVDALDGDITEEMTLPLVVTQLSPLPFTDKQHRRVFLAISGPETERMACIVSDSPEARKQMSKLRNKLFFHVIDHDAGTLESRHV---------EIDRGQVTTSGHMCYPSFSLATAVVAPEADQTIVRVVYHSDSDTVNTPAQVLGDDSLLLKYLNTHLAAVITVTKPPPSSNEKNNRDQSGVARVGSNEDTSGGSSAPSPTLFVSLVDTVAGRILHRVKHTTASGPTHMTISENWVVYSYWNTKAHRTELSTLSLYEGIIDRFGLNPFKVPEQEDTFNSLTAPAPVVMQRTYIFPKAITSLSNTVTARGITSKNLLIALETGQVMSLHRRFLDPRRPNGPPTAAEKSEGLQQYAHILPVMPLAMVTNNETALGLTDLYVTPAVIESTSLVFAVGIDVYFTRTSPSKTFDLLASDFNRPMLLTLLGGLATALVAVSRLEANKRLRDAW 1024
BLAST of mRNA_E-fasciculatus_F_contig1382.2813.1 vs. uniprot
Match: A0A7R9YCV5_9STRA (ER membrane protein complex subunit 1 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCV5_9STRA) HSP 1 Score: 315 bits (806), Expect = 4.230e-91 Identity = 220/645 (34.11%), Postives = 337/645 (52.25%), Query Frame = 1
Query: 217 FLEAGEQGFRVLVVSEDDSAQMVGRGGVEWVREEALAAADQARNLFFVVFVDSSKDELSILAASAGEEVDHDVPGWRERLR-----LHRLELTSLVGRSL--YAATGLRLPGSEFLDSADASHSAFGLKKLAVCTTAAG----KTYALDMADGSVTWS--LFRPSWIPSDAKVLLHATRSKGALGYSPEVAVIAVGDVKTVVSGLDALTGLETYREELDLKVESAVPLGVKDGQE-RNIIMLV---DSHRQVHAVPRSVEASSALRGLLPQLFYHSLSETG-LESFSV-------VPSATADGSDMDEGPLGSATVASVPFNPTRSKVVATAYPDRRDGVQTPAHTLGDDSLLIKYINPRLFAFATLSPEE-----AESEEGAGGDARQLNSKGQ---ELTVTLVDYVSGRVLHRISHKGASEPVHMQVSESWVVYSYWSAVSHRTEMSTLSLYEGMIDKYGLSPFNRPEWKEEFSSFESRVPIVLQKTFIFPLPVTALGITLTQYGITSKNILVGTAVGQVVSLDRRFLDPRRPQEEPNKAEKEEKLIQYQPYLPVVPTQVLSYHKVIERVNRVLTEPTGLESTSLVLALGLDIFGARVAPSKTYDMLDPNFNYALLALVLGAMATAVAVANRMAAHKRLSEQW 2052
F + G+ G ++L+ D + M+ +G W REEALA+ A+ FVV +S A E D D ++ R+ LH+L V +L + A G G S +ASH+ FG K+ V A G K + +D+ DG++ WS L W D++ LH T +PE+ ++ +T + +DA +G + + L ++V+ + +G+ D R ++ L+ D+H Q P S +A + L + F+H SE G L SF + +PSAT G + + P +V A AY D +++ H LGD SLLIKY+NP L AT+ A+ GDA S + L + VD VS +VL+R+ H A+EP H+ + E+W++YSYW+ RTE+ +SL+EG + + GL+PFN+PE FS+F P+ +Q++F FP +TALGIT T GIT + ++G GQV LDRR LDPRRP + P K++KEE L+QY P+LP+ T+ ++Y+ I ++++ T P LEST+LVLA G+D+FG R P+K++D+L +FN LL +VL + + +RL +QW
Sbjct: 420 FEQDGKLGLKLLLQFADGALVMLHQGETAWRREEALASVLDAK---FVVMTPTS---------IALEHADVDPLSFKSRMEAQMQSLHQLARLFDVQGALRNFLAQGADSKGGV---SEEASHN-FGFAKIVVLLAAPGPSVQKLFGVDIRDGAMLWSKVLKGDGWKLLDSRSELHKT-------LAPEILLLRPEANQTTLLRVDATSGADVQEDVLAMRVDKVLNMGISDPDSYRRVLALITGIDAHPQCVLYPDSAKARALLGHSI--YFHHVDSEAGTLRSFVLELPSNDSIPSATETGI--------------ISWPPESERVAAVAYGDA-SAIKSATHELGDGSLLIKYLNPNLAVVATVDQNAIAGGLADGGSTTSGDASAGTSIAEPKPSLFINAVDVVSAKVLYRVGHVYAAEPFHVTLHENWIIYSYWNYRVRRTEVGAISLFEGHVARNGLNPFNKPERSSIFSAFGDEPPVAMQRSFSFPHGITALGITKTAAGITPRACIIGMESGQVFMLDRRLLDPRRPMDAPKKSQKEEGLVQYTPHLPLHSTRFVNYNTSIVGLDKIFTAPARLESTTLVLAAGVDLFGTRTTPAKSFDLLSADFNKPLLLVVLACFVGGTVILRALYRTRRLRQQW 1024
BLAST of mRNA_E-fasciculatus_F_contig1382.2813.1 vs. uniprot
Match: A0A7S2SXS9_9STRA (ER membrane protein complex subunit 1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SXS9_9STRA) HSP 1 Score: 297 bits (760), Expect = 1.730e-84 Identity = 223/645 (34.57%), Postives = 326/645 (50.54%), Query Frame = 1
Query: 223 EAGEQGFRVLVVSEDDSAQMVGRG-GVEWVREEALAAADQARNLFFVVFVDSSKDELSILAASAGEEVDHDVPGWRERLRLHRLELTSLVG--RSLYAATGLRLPGSEFLDSA-DASHSA--------------FGLKKLAVCTT-----AAGKTYALDMADGSVTWSLFRPSWIPSDAKVLLHATRSKGALGYSPEVAVIAVGDVKTVVSGLDALTGLETYREELDLKVESAVPLGVKDGQERNIIMLV----DSHRQVHAVPRSVEASSALRGLLPQLFYHSLSE-TGLESFSVVPSATADGSDMDEGPL--GSATVASVPFNPTRSKVVATAYPDRRDGVQTPAHTLGDDSLLIKYINPRLFAFATLSPEEAESEEGAGGDARQLNSKGQELTVTLVDYVSGRVLHRISHKGA-----SEPVHMQVSESWVVYSYWSAVSHRTEMSTLSLYEGMIDKYGLSPFNRPEWKEEFSSFESRVPIVLQKTFIFPLPVTALGITLTQYGITSKNILVGTAVGQVVSLDRRFLDPRRPQEEPNKAEKEEKLIQYQPYLPVVPTQVLSYHKVIERVNRVLTEPTGLESTSLVLALGLDIFGARVAPSKTYDMLDPNFNYALLALVLGAMATAVAVANRMAAHKRLSEQW 2052
+ G R LV + + +V GV W R+E+LA+ Q V FVD + +A+ G + P + ERL +HR L + + L+ + G +++A D + +A FGL ++AVC A + L + G V W P A V L A+RSK PEV ++ T V+ +D TG L + + S VPL D R + ++V D + + S A A++ L + F+H + G+ V+ AD + +G S VA + A AYP D V +PA LGDDSLL+KY+NP L + S D NS + V+LVD V+GRVLHR+SH A S PV VSE+WV+Y YW+ + RTE+ +SL+EGMIDKY L+PF P FSSF+S P+V+Q+TF+FP ++AL T+T GI++KN+LV GQV L RR LDPRRP +EP+K+EK E L+QY +L P +++ ++ + + + P +EST+LVLA G+D+F R APSK++D+L +FN +L +LG +ATA+ +A+R KRL+ W
Sbjct: 429 QGGGSALRDLVTTSQGTLALVQADRGVAWTRDESLASIQQ------VQFVDRVLHTGHLPSATEGATL----PSFSERLDMHRESLVATASWVKGLFEQALGQSMGKPAVEAAEDVASTALLGNDGFTPTMRHKFGLDRVAVCLLSPSLDAEPQLVGLALDSGKVLWRSTVPRL--EGAVVKLVASRSKSVANKHPEVVAVSTAAGVTQVTRVDGATGKVQTSTVLPIAMASMVPLPATDNSFRAVTLVVGHGPDQAVETCLLHDSPSARDAIQNLAGKTFFHLVDRGAGIIESRVL---LADSLHLIDGSACYSSLEVARTVLAEDHETIAAVAYPTPGDIVNSPAQILGDDSLLLKYLNPNLAVVVSHS----------SSDFTLSNST---VYVSLVDTVAGRVLHRVSHPNARPVPSSSPV--VVSENWVMYYYWNTKAKRTEIGVMSLFEGMIDKYHLNPFRVPNQDGNFSSFKSPPPVVMQRTFVFPRAISALQTTVTAQGISTKNLLVAMETGQVAQLHRRMLDPRRPNKEPSKSEKMEGLMQYFTFLFPPPMAMVTANRSVTGLESIYVAPAIIESTTLVLATGVDVFFMRTAPSKSFDLLAADFNRPMLLALLGGLATAMVLASRFERKKRLAGAW 1043
BLAST of mRNA_E-fasciculatus_F_contig1382.2813.1 vs. uniprot
Match: A0A7S2Y1Q6_9STRA (ER membrane protein complex subunit 1 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1Q6_9STRA) HSP 1 Score: 265 bits (678), Expect = 1.240e-80 Identity = 130/246 (52.85%), Postives = 174/246 (70.73%), Query Frame = 1
Query: 1315 LTVTLVDYVSGRVLHRISHKGASEPVHMQVSESWVVYSYWSAVSHRTEMSTLSLYEGMIDKYGLSPFNRPEWKEEFSSFESRVPIVLQKTFIFPLPVTALGITLTQYGITSKNILVGTAVGQVVSLDRRFLDPRRPQEEPNKAEKEEKLIQYQPYLPVVPTQVLSYHKVIERVNRVLTEPTGLESTSLVLALGLDIFGARVAPSKTYDMLDPNFNYALLALVLGAMATAVAVANRMAAHKRLSEQW 2052
L + L+D VSG +LHR H+ + PV M E+WVVYSYW+A +HRTEM TL+LYEG IDK+GL+PFN+PE + FSSF S PIVLQKTFIFP + +LG+T + + +TS+++LVG GQVVSLDRR LDPRRP P K E+ E L +Y P+LPV PT V++Y + +ER++ + T P LEST L+L GLDI+ R+ PS+T+D+L +FNY LL +LG M A V ++ +K+LS W
Sbjct: 3 LCIHLMDTVSGAILHRSVHQAGTGPVQMVAFENWVVYSYWNAKAHRTEMGTLTLYEGFIDKHGLNPFNQPEQETTFSSFNSPPPIVLQKTFIFPHAIRSLGVTRSTHAVTSRHVLVGLHNGQVVSLDRRLLDPRRPDHNPKKDEQAEGLKRYDPFLPVTPTLVVTYGRTVERMDAIHTAPARLESTCLMLTTGLDIYSMRITPSQTFDLLAEDFNYILLVTILGGMMIATIVLRKVVKNKQLSSSW 248
BLAST of mRNA_E-fasciculatus_F_contig1382.2813.1 vs. uniprot
Match: A0A5C7HZ33_9ROSI (ER membrane protein complex subunit 1 n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7HZ33_9ROSI) HSP 1 Score: 283 bits (725), Expect = 6.280e-80 Identity = 203/636 (31.92%), Postives = 322/636 (50.63%), Query Frame = 1
Query: 238 GFRVLVVSEDDSAQMVGRGGVEWVREEALAAADQARNLFFVVFVDSSKDELSILAASAGEEVDHDVPGWRERLRLHRLELTSLV----GRSLYAATGLRLPGSEFLDSADASHSAFGLKKLAVCTTAAGKTYALDMADGSVTWSLFRPSWIPSDA-------KVLLHATRSKGALGYSPEVAVIA----VGDVKTVVSGLDALTGLETYREELDLKVESAVPLGVKDGQERNIIMLVDSHRQVHAVPRSVEASSALRGLLPQLFYHSL-SETGLESFSVVPSATADGSDMDEGPLGSATVASVPFNPTRSKVVATAYPDRRDGVQTPAHTLGDDSLLIKYINPRLFAFATLSPEEAESEEGAGGDARQLNSKGQELTVTLVDYVSGRVLHRISHKGASEPVHMQVSESWVVYSYWSAVSHRTEMSTLSLYEG-----------MIDKYGL----SPFNRPEWKEEFSSFESRVPIVLQKTFIFPLPVTALGITLTQYGITSKNILVGTAVGQVVSLDRRFLDPRRPQEEPNKAEKEEKLIQYQPYLPVVPTQVLSYHKVIERVNRVLTEPTGLESTSLVLALGLDIFGARVAPSKTYDMLDPNFNYALLALVLGAMATAVAVANRMAAHKRLSEQW 2052
GFR L+V ED S +V +G + W RE++LA+ V KD +S+ +V+H++ W L+ H L+L + + A +RL S+ + + G +KL + T AGK +AL DG V WSL PS S+A V A+ +P V V+ + V+S +DA TG E +L + +PL D E+ + +LVD+ R+VH P++ EA S + ++++S+ ++ G+ V+ S G D+ + + S+ F K++AT + V T A D ++ KYI+ L AT+SP+ A G ++ + L L+D VSGR+LHR++H GA PVH SE+WVVY Y++ +HR EMS + +Y+ ++ K+ L S ++RPE + +++ F V A+ +TLT GITSK +L+GT QV++LD+RFLDPRR P +AEKEE +I LP++P +++ +E + ++T P LEST+LV + G+D+F R+APS+TYD L +F+YALL + + A+ A+ V ++ K L E+W
Sbjct: 384 GFRALIVMEDHSLLLVQQGKIVWNREDSLASIIDVTTSELPV----EKDGVSVA------KVEHNLFEW---LKGHLLKLKGTLMLASAEDVVAIQAIRLKSSK---KSKMTRDHNGFRKLLIVLTKAGKFFALHSGDGRVVWSLLLPSLRKSEACDNPTGLNVYQWQIPHHHAMDENPSVLVVGRCGFSSNAPGVLSFVDAYTGKELNSLDLAHSIVQVIPLPFTDSTEQRLHLLVDADRRVHLYPKTPEAKSTFEQEISNIYWYSVEADNGIIKGHVIKSKCI-GKGADDFCYDTGNLWSIVFPSESEKIIATVTRKPNEVVHTQAKVSVDQDVMYKYISKNLLFVATVSPK-------ASGTIGSVDPEESSLVAYLIDTVSGRILHRMTHHGAQGPVHAVFSENWVVYHYFNLRAHRYEMSVIEIYDQSRAENKDVLKLILGKHNLTAPVSSYSRPE------------VVTKSQSYYFTHSVKAIAVTLTAKGITSKQLLIGTIGDQVLALDKRFLDPRR-SINPTQAEKEEGIIPLTDALPIIPQSYITHSLKVEGLRGIITVPAKLESTTLVFSYGVDLFFTRLAPSRTYDSLTEDFSYALLLITIVALVAAIFVTWVLSEKKELREKW 982
BLAST of mRNA_E-fasciculatus_F_contig1382.2813.1 vs. uniprot
Match: UPI001263152D (ER membrane protein complex subunit 1 n=2 Tax=Anacardiaceae TaxID=4011 RepID=UPI001263152D) HSP 1 Score: 283 bits (723), Expect = 1.180e-79 Identity = 197/629 (31.32%), Postives = 316/629 (50.24%), Query Frame = 1
Query: 238 GFRVLVVSEDDSAQMVGRGGVEWVREEALAAADQARNLFFVVFVDSSKDELSILAASAGEEVDHDVPGWRERLRLHRLELTSLV----GRSLYAATGLRLPGSEFLDSADASHSAFGLKKLAVCTTAAGKTYALDMADGSVTWSLFRPSW-------IPSDAKVLLHATRSKGALGYSPEVAVIAV----GDVKTVVSGLDALTGLETYREELDLKVESAVPLGVKDGQERNIIMLVDSHRQVHAVPRSVEASSALRGLLPQLFYHSLSETGLESFSVVPSATADGSDMDEGPLGSATVASVPFNPTRSKVVATAYPDRRDGVQTPAHTLGDDSLLIKYINPRLFAFATLSPEEAESEEGAGGDARQLNSKGQELTVTLVDYVSGRVLHRISHKGASEPVHMQVSESWVVYSYWSAVSHRTEMSTLSLYEGMIDKYGLSPFNRPEWK---------EEFSSFESRVPIVLQKTFIFPLPVTALGITLTQYGITSKNILVGTAVGQVVSLDRRFLDPRRPQEEPNKAEKEEKLIQYQPYLPVVPTQVLSYHKVIERVNRVLTEPTGLESTSLVLALGLDIFGARVAPSKTYDMLDPNFNYALLALVLGAMATAVAVANRMAAHKRLSEQW 2052
GFR L+V ED S ++ +G + W RE+ALA+ +D + EL + A + + +H++ W L+ H L+L + + A +RL SE + + G +KL + T AGK +AL DG V WSL PS P+ + A+ +P V V+ + V+S +D TG E +L V +PL + D E+ + +LVD+ R+VH PR+ EA + + ++++S+ V T G D+ S + S+ F K++AT + V T A D ++ KYI+ L AT+SP+ + G G + + L L+D V+GR+LHR++H GA PVH SE+WVVY Y++ +HR EMS + +Y+ + N+ WK SS+ + +++ F V A+ +TLT GITSK +L+GT QV++LD+RF+DPRR P++AEKEE +I +LP++P +++ +E + ++T P LEST+LV A G+D+F ++APS+TYD L +F+YALL + + A+ A+ V ++ K L ++W
Sbjct: 384 GFRALIVMEDHSLLLLQQGKIVWNREDALAS-----------IIDVTTSELPVDKAVSVAKGEHNLIDW---LKGHILKLKGTLMLASPEDVVAIQAIRLKSSE---KSKLTRDHNGFRKLLIVLTKAGKIFALHSGDGRVVWSLLLPSLRKSKVCDCPTGLNLYQWQVPHHHAMDQNPSVLVVGKCGYSSNAPAVLSFVDTYTGKELNSLDLGHSVVQIIPLPLTDSTEQRLHLLVDADRRVHLYPRTPEARTIFQQEFSNIYWYSVEADNSIIKGHVIKRTCIGEVADDFCFESGDLWSIVFPLESEKIIATVSRKSNEVVHTQAKVTSDQDVMYKYISKNLLFVATVSPK---ASVGIGS----ADPEEASLFAYLIDTVTGRILHRMTHHGAQGPVHAVFSENWVVYHYFNLRAHRFEMSVIEIYDQSRAE------NKDVWKLVVGKHNLTAPVSSYSRPEVVTKSQSYFFTHSVKAIAVTLTAKGITSKQLLIGTIGDQVLALDKRFVDPRRTVN-PSQAEKEEGIIPLTDFLPIIPQSYVTHALKVEGLRNIVTVPAKLESTTLVFAYGMDLFFTQLAPSRTYDSLTEDFSYALLLITIIALVAAIFVTWILSERKELQDKW 981
BLAST of mRNA_E-fasciculatus_F_contig1382.2813.1 vs. uniprot
Match: UPI001C7A6F97 (Uncharacterized protein n=2 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C7A6F97) HSP 1 Score: 274 bits (700), Expect = 3.330e-79 Identity = 202/631 (32.01%), Postives = 314/631 (49.76%), Query Frame = 1
Query: 238 GFRVLVVSEDDSAQMVGRGGVEWVREEALAAADQARNLFFVVFVDSSKDELSILAASAG-EEVDHDVPGWRERLRLHRLELTSLV----GRSLYAATGLRLPGSEFLDSADASHSAFGLKKLAVCTTAAGKTYALDMADGSVTWSLFRPSWI-------PSDAKVLLHATRSKGALGYSPEVAVIAV----GDVKTVVSGLDALTGLETYREELDLKVESAVPLGVKDGQERNIIMLVDSHRQVHAVPRSVEASSALRGLLPQLFYHSL-SETGLESFSVVPSATADGSDMDEGPLGSATVASVPFNPTRSKVVATAYPDRRDGVQTPAHTLGDDSLLIKYINPRLFAFATLSPEEAESEEGAGGDARQLNSKGQELTVTLVDYVSGRVLHRISHKGASEPVHMQVSESWVVYSYWSAVSHRTEMSTLSLYEGMIDKYGLSPFNRPEWKEEFSSFESRVPIVL---------QKTFIFPLPVTALGITLTQYGITSKNILVGTAVGQVVSLDRRFLDPRRPQEEPNKAEKEEKLIQYQPYLPVVPTQVLSYHKVIERVNRVLTEPTGLESTSLVLALGLDIFGARVAPSKTYDMLDPNFNYALLALVLGAMATAVAVANRMAAHKRLSEQW 2052
GFRVL+V ED S ++ +G + W REE LA+ +D + EL + +V+ ++ W L+ H L+L + + +RL SE + + G +KL + T AGK YAL DG V WSL PS P+ V A+ +P V V D V+S +D TG E L V +PL D E+++ +L+DS + H PR+ EA + ++++S+ ++ G+ + S +DE S+ + S+ F K++ATA + V T A + D ++ KYI+ L AT++P+ A G+ + + L V L+D V+GR+LHR++H G+ PVH +SE+WVVY Y++ +HR EMS + +Y+ + N+ WK PI L +++ F V AL +T T GITSK +L+GT QV++LD+R+LDPRR P +AEKEE +I LP++P +++ +E + ++T PT LEST+LV A G+D+F R+APS+TYD L +F+YALL L + A+ A+ V ++ K L E+W
Sbjct: 27 GFRVLIVMEDHSLLLLQQGEIVWSREEGLAS-----------IIDVTTSELPVEKKGVSVAKVEQNLFEW---LKGHVLKLKGTLMLASPEDIAVIQDMRLKSSE---KSKMTRDHNGFRKLLIVLTRAGKLYALHTGDGRVIWSLLLPSLRKSGSCKHPTGLSVYQWQVPHHHAMDENPSVLVAGRCGPHWDAPGVLSFVDTYTGKELNALGLTHSVAQVIPLPFTDSTEQHLHLLIDSDQCAHLYPRTSEAIGIFQREFSNIYWYSVEADNGIIKGHALRSNCIG--VVDEYCFNSSDLWSIVFPSESEKIIATATRKLNEVVHTQAKVIADQDVMFKYISKNLLFVATIAPK-------ASGEFGKPTPEESWLVVYLIDTVTGRILHRMTHHGSQGPVHAVLSENWVVYHYFNLRAHRYEMSVIEIYDLSRAE------NKDVWKLLVGKHNLTSPISLYSRPEVMTKSQSYFFTQSVKALAVTSTAKGITSKQLLIGTIGDQVLALDKRYLDPRR-SVNPTQAEKEEGIIPLSDSLPIIPQSYVTHALKVEGLRGIVTLPTKLESTTLVFAHGVDLFLTRIAPSRTYDSLTEDFSYALLLLTIVALIAAIFVTWVLSEKKELQEKW 624
BLAST of mRNA_E-fasciculatus_F_contig1382.2813.1 vs. uniprot
Match: A0A7J6EPI9_CANSA (ER membrane protein complex subunit 1 n=5 Tax=Cannabis sativa TaxID=3483 RepID=A0A7J6EPI9_CANSA) HSP 1 Score: 280 bits (716), Expect = 1.160e-78 Identity = 197/630 (31.27%), Postives = 315/630 (50.00%), Query Frame = 1
Query: 238 GFRVLVVSEDDSAQMVGRGGVEWVREEALAAADQARNLFFVVFVDSSKDELSILAASAG-EEVDHDVPGWRERLRLHRLELTSLV----GRSLYAATGLRLPGSEFLDSADASHSAFGLKKLAVCTTAAGKTYALDMADGSVTWSLFRPSW------IPSDAKVLLHATRSKGALGYSPEVAVIA----VGDVKTVVSGLDALTGLETYREELDLKVESAVPLGVKDGQERNIIMLVDSHRQVHAVPRSVEASSALRGLLPQLFYHSL-SETGLESFSVVPSATADGSDMDEGPLGSATVASVPFNPTRSKVVATAYPDRRDGVQTPAHTLGDDSLLIKYINPRLFAFATLSPEEAESEEGAGGDARQLNSKGQELTVTLVDYVSGRVLHRISHKGASEPVHMQVSESWVVYSYWSAVSHRTEMSTLSLYEGMIDKYGLSPFNRPEWK---------EEFSSFESRVPIVLQKTFIFPLPVTALGITLTQYGITSKNILVGTAVGQVVSLDRRFLDPRRPQEEPNKAEKEEKLIQYQPYLPVVPTQVLSYHKVIERVNRVLTEPTGLESTSLVLALGLDIFGARVAPSKTYDMLDPNFNYALLALVLGAMATAVAVANRMAAHKRLSEQW 2052
GFR LVV+ED S ++ +G + W RE+ LA+ VD + EL + +V+ ++ W L+ H L+L + + A G+RL SE + + G +KL + T AGK +AL DG V WSL PS PS + AL +P V ++ D ++S +D TG E V +PL D E+ + +L+D ++ + PR+ EA S + +++HS+ ++ G+ + +A G ++DE S V S+ F K++AT + V T A +GD ++ KYI+ L +T++P+ A G+ + L V L+D +SGR+LHR++H G+ PVH SE+WVVY Y++ +HR EMS + +Y+ N+ WK SS+ + +++ F V A+ +T T GITSK +L+GT QV++LD+RFLDPRR P++AE+EE L+ LP++P +++ +E + ++T P LEST+LV A G+D+F R+APSKTYD L +F+YALL + + + A+ V ++ K L ++W
Sbjct: 386 GFRALVVTEDHSLLLLQQGAIVWSREDGLAS-----------IVDVATSELPVEKEGVSVAKVEDNLFEW---LKGHMLKLKGTLMLASPEDVVAIQGMRLKNSE---KSKMTRDHNGFRKLLLVLTRAGKLFALHSGDGRVVWSLLLPSLRNSACKYPSGLSIYQWQVPHHHALDENPSVLIVGRCGQSYDAPGILSFVDTYTGKEISSLSPTHSVVQVLPLPFTDATEQRLHLLIDVDQRTYLYPRTPEAISIFQREFSNIYWHSVDADKGIIKGHALKRNSA-GENLDEYCFDSRDVWSIVFPSDSEKIIATVTRKLNEVVHTQAKIIGDHDVMYKYISKNLMFVSTVTPK-------ASGEIGAATPEESSLVVYLIDTISGRILHRMTHHGSQGPVHAVFSENWVVYHYFNLRAHRYEMSVIEIYDQS------RAANKDLWKLVLGKHNLTYPISSYSRTEVVTKSQSYFFTHSVKAISVTSTAKGITSKQLLIGTIADQVLALDKRFLDPRR-SANPSQAEREEGLVPLTDSLPIIPQSYVTHALKVEGLRGIVTIPARLESTTLVFAYGVDLFYTRIAPSKTYDSLTEDFSYALLLITIVVLVAAIFVTWILSEKKDLQDKW 983 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1382.2813.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1382.2813.1 >prot_E-fasciculatus_F_contig1382.2813.1 ID=prot_E-fasciculatus_F_contig1382.2813.1|Name=mRNA_E-fasciculatus_F_contig1382.2813.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=686bp GGGGCALAGGVSASGKTFVASASMLQGGPADKVVVSVAEVTAFGDFTAALback to top mRNA from alignment at E-fasciculatus_F_contig1382:1..6609+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1382.2813.1 ID=mRNA_E-fasciculatus_F_contig1382.2813.1|Name=mRNA_E-fasciculatus_F_contig1382.2813.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=6609bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1382:1..6609+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1382:1..6609+ >mRNA_E-fasciculatus_F_contig1382.2813.1 ID=mRNA_E-fasciculatus_F_contig1382.2813.1|Name=mRNA_E-fasciculatus_F_contig1382.2813.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4116bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1382:1..6609+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |