mRNA_E-fasciculatus_F_contig1381.2809.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1381.2809.1 vs. uniprot
Match: A0A6H5K056_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K056_9PHAE) HSP 1 Score: 219 bits (557), Expect = 1.550e-64 Identity = 103/119 (86.55%), Postives = 110/119 (92.44%), Query Frame = 3
Query: 318 GRTSKSPELADWFRPGFSTTTETDEVCAAATAMASLQEYFNYEMGLRCGIPSVTMMGTVEDWQMLREKIERLLEFEVQDNPEGNVMEVWVGYLRKVCDGFVESAEHPDRAATVDFWDKV 674
G+ K PELADWF PGFSTTTETDEVCAAATAMASLQEYFNYEM LRCGIPSV +MGTVEDW++LREKIER+LEFEV DNPEG VME+WVGYLRKVCDGFVESAEHP+ AATVDFWDKV
Sbjct: 141 GQNIKPPELADWFLPGFSTTTETDEVCAAATAMASLQEYFNYEMCLRCGIPSVALMGTVEDWKLLREKIERMLEFEVLDNPEGKVMELWVGYLRKVCDGFVESAEHPNSAATVDFWDKV 259
BLAST of mRNA_E-fasciculatus_F_contig1381.2809.1 vs. uniprot
Match: D7FL09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL09_ECTSI) HSP 1 Score: 210 bits (534), Expect = 2.920e-63 Identity = 103/129 (79.84%), Postives = 111/129 (86.05%), Query Frame = 3
Query: 288 LLGKICSEKSGRTSKSPELADWFRPGFSTTTETDEVCAAATAMASLQEYFNYEMGLRCGIPSVTMMGTVEDWQMLREKIERLLEFEVQDNPEGNVMEVWVGYLRKVCDGFVESAEHPDRAATVDFWDKV 674
LLG+I + KSPELADWFRPGFST+TETDEVCAAATAMASLQ YF + M L C IPSVT+MGTVEDW++LREKIER+LEFEV DNPEG VMEVWVGYLRKVCDGFVESAEHPD AATVDFW KV
Sbjct: 69 LLGQI-----RQNIKSPELADWFRPGFSTSTETDEVCAAATAMASLQAYFEHTMCLACSIPSVTLMGTVEDWELLREKIERMLEFEVLDNPEGKVMEVWVGYLRKVCDGFVESAEHPDSAATVDFWAKV 192
BLAST of mRNA_E-fasciculatus_F_contig1381.2809.1 vs. uniprot
Match: D7FL08_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D7FL08_ECTSI) HSP 1 Score: 213 bits (541), Expect = 1.040e-61 Identity = 104/129 (80.62%), Postives = 111/129 (86.05%), Query Frame = 3
Query: 288 LLGKICSEKSGRTSKSPELADWFRPGFSTTTETDEVCAAATAMASLQEYFNYEMGLRCGIPSVTMMGTVEDWQMLREKIERLLEFEVQDNPEGNVMEVWVGYLRKVCDGFVESAEHPDRAATVDFWDKV 674
LLG+I + KSPELADWFRPGFSTTTETDEVCAAA AMASLQ YF Y M L CGIPSVT+MGTVEDW++LREKIER+LEFEV NPEG VME+WVGYLRKVCDGFVESAEHPD AATVDFWDKV
Sbjct: 172 LLGQI-----RQNIKSPELADWFRPGFSTTTETDEVCAAAAAMASLQAYFEYTMCLACGIPSVTLMGTVEDWKLLREKIERMLEFEVLGNPEGKVMELWVGYLRKVCDGFVESAEHPDSAATVDFWDKV 295
BLAST of mRNA_E-fasciculatus_F_contig1381.2809.1 vs. uniprot
Match: A0A6H5KCJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ8_9PHAE) HSP 1 Score: 205 bits (521), Expect = 3.490e-59 Identity = 104/129 (80.62%), Postives = 111/129 (86.05%), Query Frame = 3
Query: 288 LLGKICSEKSGRTSKSPELADWFRPGFSTTTETDEVCAAATAMASLQEYFNYEMGLRCGIPSVTMMGTVEDWQMLREKIERLLEFEVQDNPEGNVMEVWVGYLRKVCDGFVESAEHPDRAATVDFWDKV 674
LLG+I + KSPEL F PGFSTTTETDEVCAAATAMASLQE FNYEM LRCGIPSV +MGTVEDW++LREKIER+LEFEV DNPEG VME+WVGYLRKVCDGFVESAEHPD AATVDFWDKV
Sbjct: 153 LLGQI-----RQNIKSPEL---FLPGFSTTTETDEVCAAATAMASLQECFNYEMCLRCGIPSVALMGTVEDWKLLREKIERMLEFEVLDNPEGKVMELWVGYLRKVCDGFVESAEHPDSAATVDFWDKV 273
BLAST of mRNA_E-fasciculatus_F_contig1381.2809.1 vs. uniprot
Match: D7G2F1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F1_ECTSI) HSP 1 Score: 199 bits (506), Expect = 9.010e-58 Identity = 93/134 (69.40%), Postives = 113/134 (84.33%), Query Frame = 3
Query: 273 LETPKLLGKICSEKSGRTSKSPELADWFRPGFSTTTETDEVCAAATAMASLQEYFNYEMGLRCGIPSVTMMGTVEDWQMLREKIERLLEFEVQDNPEGNVMEVWVGYLRKVCDGFVESAEHPDRAATVDFWDKV 674
L+ P L+ ++ + K K+PELADWF+PGF+TTT+TDEV AAATAMASLQ YF+YE+ CG+PSVT+MGTV+DW++LR K+ERLL+FEV DNPEG+VMEVWVGYLRKVCDGFVESAEHPD T+ FWDKV
Sbjct: 99 LDYPALIREMLA-KIRENIKTPELADWFKPGFTTTTDTDEVAAAATAMASLQAYFSYEIHAECGLPSVTLMGTVQDWKLLRAKVERLLDFEVIDNPEGDVMEVWVGYLRKVCDGFVESAEHPDSTETLQFWDKV 231
BLAST of mRNA_E-fasciculatus_F_contig1381.2809.1 vs. uniprot
Match: D8LB67_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB67_ECTSI) HSP 1 Score: 196 bits (498), Expect = 2.280e-56 Identity = 91/115 (79.13%), Postives = 99/115 (86.09%), Query Frame = 3
Query: 330 KSPELADWFRPGFSTTTETDEVCAAATAMASLQEYFNYEMGLRCGIPSVTMMGTVEDWQMLREKIERLLEFEVQDNPEGNVMEVWVGYLRKVCDGFVESAEHPDRAATVDFWDKV 674
KSPE ADWFRPGFSTTTE DEVCAAATAMASLQ YF Y M RCGIPSVT+MGTV DW++LREKIERLLEFEV NP+G VM+ WVGYLRKVCDGFVESAEHP T++FWD+V
Sbjct: 78 KSPEFADWFRPGFSTTTEKDEVCAAATAMASLQAYFEYTMMYRCGIPSVTLMGTVGDWKLLREKIERLLEFEVDGNPQGKVMQTWVGYLRKVCDGFVESAEHPGSPETLEFWDRV 192
BLAST of mRNA_E-fasciculatus_F_contig1381.2809.1 vs. uniprot
Match: D7G2F2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F2_ECTSI) HSP 1 Score: 201 bits (512), Expect = 6.140e-56 Identity = 98/153 (64.05%), Postives = 120/153 (78.43%), Query Frame = 3
Query: 216 KAIFRTDEDGLQFSSWSRRLETPKLLGKICSEKSGRTSKSPELADWFRPGFSTTTETDEVCAAATAMASLQEYFNYEMGLRCGIPSVTMMGTVEDWQMLREKIERLLEFEVQDNPEGNVMEVWVGYLRKVCDGFVESAEHPDRAATVDFWDKV 674
K + R + G FS L+ P L+ ++ + K K+PELADWF+PGF+TTT+TDEV AAATAMASLQ YF+YE+ CG+PSVT+MGTV+DW++LR K+ERLL+FEV DNPEG+VMEVWVGYLRKVCDGFVESAEHPD T+ FWDKV
Sbjct: 270 KKVLRVEGGGNLFS-----LDYPALIREMLA-KIRENIKTPELADWFKPGFTTTTDTDEVAAAATAMASLQAYFSYEIHAECGLPSVTLMGTVQDWKLLRAKVERLLDFEVIDNPEGDVMEVWVGYLRKVCDGFVESAEHPDSTETLQFWDKV 416
BLAST of mRNA_E-fasciculatus_F_contig1381.2809.1 vs. uniprot
Match: A0A6H5KQX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQX2_9PHAE) HSP 1 Score: 194 bits (494), Expect = 1.480e-55 Identity = 89/115 (77.39%), Postives = 99/115 (86.09%), Query Frame = 3
Query: 330 KSPELADWFRPGFSTTTETDEVCAAATAMASLQEYFNYEMGLRCGIPSVTMMGTVEDWQMLREKIERLLEFEVQDNPEGNVMEVWVGYLRKVCDGFVESAEHPDRAATVDFWDKV 674
KSPELADWFRPGFSTTTE DEVCAAATAMASLQ YF + M CGIPSVT+ GTV DW++LREK+ERLLEFEV NPEG VM++WVGYLRKVCDGFVESAEHP T++FWD+V
Sbjct: 96 KSPELADWFRPGFSTTTERDEVCAAATAMASLQNYFEFRMRRGCGIPSVTLRGTVRDWKLLREKVERLLEFEVDGNPEGEVMQIWVGYLRKVCDGFVESAEHPGSPETLEFWDRV 210
BLAST of mRNA_E-fasciculatus_F_contig1381.2809.1 vs. uniprot
Match: A0A6H5L0H3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H3_9PHAE) HSP 1 Score: 195 bits (496), Expect = 6.140e-54 Identity = 95/157 (60.51%), Postives = 119/157 (75.80%), Query Frame = 3
Query: 216 KAIFRTDEDGLQFSSWSRRLETPKLLGKICSEKSGRTSKSPELADWFRPGFSTTTETDEVCAAATAMASLQEYFNYEMGLRCGIPSVTMMGTVEDWQMLREKIERLLEFEVQDNPEGNVMEVWVGYLRKVCDGFVESAEHPDRAATVDFWDKVCPPL 686
K + R + G FS+ ETP L+ ++ K + K PELADWF+PGF+TT TDEV AAATA+ SLQ YF+YE+ L CG+PSVT+MGTV+DW++LR K+ERLL+FEV+DNPE +VMEVWVGYLR+VCDGFVESAEHPD T+ WDKV P +
Sbjct: 219 KKVLRVEGGGNLFSA-----ETPVLIREMLG-KIRQNVKMPELADWFKPGFTTTANTDEVAAAATAITSLQAYFSYEIHLECGLPSVTLMGTVQDWKLLRAKVERLLDFEVKDNPEEDVMEVWVGYLREVCDGFVESAEHPDSTETLQVWDKVVPHI 369
BLAST of mRNA_E-fasciculatus_F_contig1381.2809.1 vs. uniprot
Match: D8LQ89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ89_ECTSI) HSP 1 Score: 184 bits (467), Expect = 1.010e-52 Identity = 88/116 (75.86%), Postives = 98/116 (84.48%), Query Frame = 3
Query: 330 KSPELADWFRPGFSTTTETDEVCAAATAMASLQEYFNYEMGLRCGIPSVTMMGTVEDWQMLREKIERLLEFEVQDNPEGN-VMEVWVGYLRKVCDGFVESAEHPDRAATVDFWDKV 674
KSPELADWFRPGFSTTTE DEVCAAATAMASLQ YF Y CGIPSVT+ GTV DW++LREKIERLLEFEV NPE + VM++WVGYLRKVCDGFV+SAEHP T++FWD+V
Sbjct: 78 KSPELADWFRPGFSTTTERDEVCAAATAMASLQGYFEYSFMCGCGIPSVTLRGTVGDWKLLREKIERLLEFEVDGNPEEDKVMQIWVGYLRKVCDGFVKSAEHPGSPETLEFWDRV 193 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1381.2809.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1381.2809.1 >prot_E-fasciculatus_F_contig1381.2809.1 ID=prot_E-fasciculatus_F_contig1381.2809.1|Name=mRNA_E-fasciculatus_F_contig1381.2809.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=159bp MASLQEYFNYEMGLRCGIPSVTMMGTVEDWQMLREKIERLLEFEVQDNPEback to top mRNA from alignment at E-fasciculatus_F_contig1381:12671..14072+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1381.2809.1 ID=mRNA_E-fasciculatus_F_contig1381.2809.1|Name=mRNA_E-fasciculatus_F_contig1381.2809.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1402bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1381:12671..14072+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1381:12671..14072+ >mRNA_E-fasciculatus_F_contig1381.2809.1 ID=mRNA_E-fasciculatus_F_contig1381.2809.1|Name=mRNA_E-fasciculatus_F_contig1381.2809.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=954bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1381:12671..14072+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |