mRNA_E-fasciculatus_F_contig1381.2807.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1381.2807.1
Unique NamemRNA_E-fasciculatus_F_contig1381.2807.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1381.2807.1 vs. uniprot
Match: D7FL12_ECTSI (Nicotinamide-nucleotide adenylyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL12_ECTSI)

HSP 1 Score: 525 bits (1353), Expect = 1.190e-184
Identity = 262/284 (92.25%), Postives = 275/284 (96.83%), Query Frame = 3 
Query:  111 IAEMQKVLLFGLSGNPPTGRDGHGGMIEYFVNLERFSEIWVLPVYKHMFSVKRKAMAQTGAPTYEDRIEMCRLAFESYSTASCRVRVLRTEQEVFAEMINSQGAGPARSSTYDVVVYLKKQHPDIEFSLLLGTDTYQDLRKGKWRKSEELMSMVSLVIVDRMGVRPETENLLSGVELHHPPLLTDVSSTKIRDARAADLLEGSLAVETSVLRYMKDHSLYGFGRQSRLEKLLMAASDRCSSVFSEERRWMVIAGTAAVVVTVGVLRVVGRFRDGGVRGGRACSV 962
            ++EMQKVLLFGLSGNPPTGRDGHGGMIEYFVNL RFSEIWVLPVY+HMFS KRKAMA+TGAPTYEDRIEMCRLAFESYSTASCRVRVLRTEQEVFAEM+NS+G GPARSSTYDVVVYLKKQHPD+EFSLLLGTDTYQDLRKGKWRKSEELM+MVSL IVDRMGVRPETENLLSGVELHHPPLLTDVSSTKIRDARA DLLEG+LAVETSVLRYMKDH LYGFGRQSRLE +L+AAS+R SSVFSEERRWMVIAGTAAVVVTVGVLRVVGRFRDGG+RGGRA SV
Sbjct:    1 MSEMQKVLLFGLSGNPPTGRDGHGGMIEYFVNLARFSEIWVLPVYQHMFSAKRKAMAKTGAPTYEDRIEMCRLAFESYSTASCRVRVLRTEQEVFAEMLNSRGTGPARSSTYDVVVYLKKQHPDVEFSLLLGTDTYQDLRKGKWRKSEELMNMVSLAIVDRMGVRPETENLLSGVELHHPPLLTDVSSTKIRDARAEDLLEGTLAVETSVLRYMKDHRLYGFGRQSRLENVLVAASERFSSVFSEERRWMVIAGTAAVVVTVGVLRVVGRFRDGGIRGGRARSV 284
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BLAST of mRNA_E-fasciculatus_F_contig1381.2807.1 vs. uniprot
Match: A0A835ZEG0_9STRA (Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEG0_9STRA)

HSP 1 Score: 221 bits (562), Expect = 2.600e-65
Identity = 111/225 (49.33%), Postives = 146/225 (64.89%), Query Frame = 3 
Query:  126 KVLLFGLSGNPPTGRDGHGGMIEYFVNLERFSEIWVLPVYKHMFSVKRKAMAQTGAPTYEDRIEMCRLAFESYSTASCRVRVLRTEQEVFAEMINSQGAGP-----ARSSTYDVVVYLKKQHPDIEFSLLLGTDTYQDLRKGKWRKSEELMSMVSLVIVDRMGVRPETENLLSGVELHHPPLLTDVSSTKIRDARAADLLEGSLAVETSVLRYMKDHSLYGFGRQ 785
            KVLLFG SGNPPTGR GHGG++ YF     + EIW++PVY+HMFS KR +M+Q GA T++ R+EMC+LAFE  S  +C V+ L TE+EVF +M+ +    P      R  TYDV+ YL+KQHPD EFS +LG D Y DL KGKW  S+EL+     V+VDR GV P  + +  G  +HH   LT VSS+ +R +     L+   A+  +V  YM+ H LY FGR+
Sbjct:   16 KVLLFGTSGNPPTGRGGHGGIVHYFCESGLYDEIWIMPVYRHMFSHKRTSMSQPGAATFDQRLEMCKLAFEQESCDTCCVKALPTEREVF-DMLAAADPDPHAVERIRVCTYDVLKYLRKQHPDAEFSFVLGMDAYVDLLKGKWAHSKELLDETEFVVVDRRGVMPHHDAVPHGTHIHHVGDLTAVSSSAVRASDDLAFLQDPTALHHAVYSYMQAHGLYAFGRR 239
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BLAST of mRNA_E-fasciculatus_F_contig1381.2807.1 vs. uniprot
Match: H3GJQ3_PHYRM (Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJQ3_PHYRM)

HSP 1 Score: 162 bits (409), Expect = 2.080e-43
Identity = 97/224 (43.30%), Postives = 139/224 (62.05%), Query Frame = 3 
Query:  123 QKVLLFGLSGNPPTGRDGHGGMIEYFVNLERFSEIWVLPVYKHMFSVKRKAMAQTGAPTYEDRIEMCRLAFESYST---ASCRVRVLRTEQEVFA-EMINSQGAGPARSSTYDVVVYLKKQHPDIEFSLLLGTDTYQDLRKGKWRKSEELMSMVSLVIVDRMGVR-PETENLLSG-VELHHPPLLTDVSSTKIRDARAADLLEGSLAVETSVLRYMKDHSLYGF 776
            ++VLLFGLS NPPTGR GH G++++ + L  + EIW+LPVY+H++S KR+      AP +E R+EMCRLA E+      AS R++V++ E+E+F      S      R  + D+V Y+  +HPD  F++LLG DTY DL  GKW++  ELM +V L++VDR GV  P  E   +  V+  H P L+DVSST +R    +D  E    ++ +VL Y+  H LY F
Sbjct:    6 REVLLFGLSANPPTGRAGHMGVVQHCLPL--YDEIWLLPVYQHIYSSKREL-----AP-FEHRLEMCRLALETLQRDGDASARLKVVQEEREMFEYAAAASDSLEQLRLGSIDLVHYMLDKHPDTSFTMLLGGDTYADLLAGKWKRGNELMQLVKLLVVDRKGVASPWREGQTADRVKYLHVPELSDVSSTMVR--ATSDRAELEKLLDPAVLDYIVQHKLYAF 219
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BLAST of mRNA_E-fasciculatus_F_contig1381.2807.1 vs. uniprot
Match: G4ZH97_PHYSP (Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZH97_PHYSP)

HSP 1 Score: 161 bits (407), Expect = 4.190e-43
Identity = 96/228 (42.11%), Postives = 137/228 (60.09%), Query Frame = 3 
Query:  123 QKVLLFGLSGNPPTGRDGHGGMIEYFVNLERFSEIWVLPVYKHMFSVKRKAMAQTGAPTYEDRIEMCRLAFESYSTAS---CRVRVLRTEQEVFAEMIN-SQGAGPARSSTYDVVVYLKKQHPDIEFSLLLGTDTYQDLRKGKWRKSEELMSMVSLVIVDRMGV------RPETENLLSGVELHHPPLLTDVSSTKIRDARAADLLEGSLAVETSVLRYMKDHSLYGF 776
            ++VLLFGLS NPPTG  GH G++ +   +  F EIW+LPVY+H++S KR+      AP +E R+EMCRL  ES   A      +RV++ E+E+F      S  A   R  + D+V+YL+ ++ D  F++LLG DTY DL  GKW++ +ELM +V L++VDR GV      + E       V+  H P L+DVSSTK+R    AD  E    ++ +VL Y+ +H LY F
Sbjct:    4 REVLLFGLSANPPTGAAGHMGVVRHCRPM--FDEIWLLPVYQHIYSSKRQL-----AP-FEHRVEMCRLVLESLQRADDAGAALRVVQEEREMFERAAAASDNAEQLRLGSIDLVLYLRDKYRDTSFTMLLGGDTYADLLAGKWKRGDELMQLVKLLVVDRKGVESPWRDKQEXXXXXXRVKYLHVPELSDVSSTKVR--ATADRTELEQHLDPAVLNYIVEHKLYAF 221
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BLAST of mRNA_E-fasciculatus_F_contig1381.2807.1 vs. uniprot
Match: A0A6A3F4I0_9STRA (Nicotinamide-nucleotide adenylyltransferase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3F4I0_9STRA)

HSP 1 Score: 159 bits (402), Expect = 2.000e-42
Identity = 98/227 (43.17%), Postives = 142/227 (62.56%), Query Frame = 3 
Query:  123 QKVLLFGLSGNPPTGRDGHGGMIEYFVNLERFSEIWVLPVYKHMFSVKRKAMAQTGAPTYEDRIEMCRLAFESYST---ASCRVRVLRTEQEVFAEMIN--SQGAGPARSSTYDVVVYLKKQHPDIEFSLLLGTDTYQDLRKGKWRKSEELMSMVSLVIVDRMGV----RPETENLLSGVELHHPPLLTDVSSTKIRDARAADLLEGSLAVETSVLRYMKDHSLYGF 776
            ++VLLFGLS NPPTG  GH G++ +   +  F EIW+LPVY+H++S KR+      AP +  R+EMCRLA E+      A   ++V++ E+E+F E++   S GA   R  + D+V+YL  ++ D  F++LLG DTY DL  GKW++ +ELM +V L++VDR GV    R + E     V+  H P L+DVSSTK+R   AAD  E    ++ +VL Y+ +H LY F
Sbjct:    4 REVLLFGLSANPPTGSTGHMGVVRHCRPM--FDEIWLLPVYQHIYSSKRQL-----AP-FAHRLEMCRLALETLQREDGAGAALKVVQEEREMF-ELVAAASDGAEQPRLGSLDLVLYLLDKYRDTNFTMLLGGDTYADLLAGKWKRGDELMQLVKLLVVDRQGVESPWRDQQEQ--ERVKYLHVPELSDVSSTKVR--AAADRSELEKHLDPAVLDYIVEHKLYAF 217
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BLAST of mRNA_E-fasciculatus_F_contig1381.2807.1 vs. uniprot
Match: A0A7S3M000_9STRA (Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M000_9STRA)

HSP 1 Score: 160 bits (404), Expect = 3.010e-42
Identity = 93/238 (39.08%), Postives = 141/238 (59.24%), Query Frame = 3 
Query:   99 LVESIAEMQ--KVLLFGLSGNPPTGRDGHGGMIEYFVNLERFSEIWVLPVYKHMFSVKRKAMAQTGAPTYEDRIEMCRLAFESYSTASCRVRVLRTEQEVFAEMINSQGAGPARSSTYDVVVYLKKQHPDIEFSLLLGTDTYQDLRKGKWRKSEELMSMVSLVIVDRMGVRPETENLL---SGVELHHP-PLLTDVSSTKIRDARAAD--------LLEGSLAVETSVLRYMKDHSLY 770
            ++ SI E+Q  +V +FGLSGNPPTG  GH G++ + V    F E+W+LPV++HM+S+K   ++      YE RIEMC+++ E  S   C+VRV+  E++  AE      +   R  T DV+ ++    P+I+  L+LGTDT++DL  GKW++S+ ++SMV+L +V R GV           S  E+HH  P LT+VSS+++R   +A         LL+  L  +  VL Y+K H LY
Sbjct:   24 MIASIGELQGKRVAVFGLSGNPPTGSKGHAGIVNFLVQTGLFDEVWILPVFQHMYSMKNSMVS------YEHRIEMCKMSMEDLSREGCKVRVMTIERDA-AEHYEQTESKEYRVGTVDVLDFILSHCPEIKPHLVLGTDTFKDLLAGKWKQSDRILSMVTLHVVSRQGVETGPSTAAPPPSAHEVHHHVPWLTEVSSSQVRAIYSASSEHPENNALLKDLL--DPRVLDYIKVHHLY 252
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BLAST of mRNA_E-fasciculatus_F_contig1381.2807.1 vs. uniprot
Match: A0A024UBZ2_9STRA (Nicotinamide-nucleotide adenylyltransferase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UBZ2_9STRA)

HSP 1 Score: 155 bits (393), Expect = 3.230e-41
Identity = 95/224 (42.41%), Postives = 130/224 (58.04%), Query Frame = 3 
Query:  120 MQKVLLFGLSGNPPTGRDGHGGMIEYFVNLERFSEIWVLPVYKHMFSVKRKAMAQTGAPTYEDRIEMCRLAFESYSTASCRVRVLRTEQEVFAEMINSQGAGP----ARSSTYDVVVYLKKQHPDIEFSLLLGTDTYQDLRKGKWRKSEELMSMVSLVIVDRMGVRPETENLLSGVELHHPPLLTDVSSTKIRDARAADLLEGSLAVETSVLRYMKDHSLYGFG 779
            M++V++FG S NPP G  GH G +E+F     F E+WVLPVY+H++S KR         T+E R+ M  LA ++      RVRV++ E++V+   + +  AG      R  T D+V +LK QHPD+EFS LLG DTY DL +GKW+    L+ MV LV++ R GV+ +T    S V +   P L D SSTK R +R A     +  V   VL YM+ H LY FG
Sbjct:    1 MKRVVVFGTSANPPCGMGGHMGCVEHFAC--EFDEVWVLPVYQHIYSSKRHL------ETFEHRVAMLELARQAIPHGD-RVRVVQAEKDVWMHALAAAPAGTDPCSIRIGTVDIVEHLKTQHPDVEFSWLLGADTYMDLLQGKWKGGLALLDMVPLVVLPREGVKLDTSAHPS-VTISSIPSLDDSSSTKARQSRDA----AASLVLPPVLAYMQAHKLYAFG 210
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BLAST of mRNA_E-fasciculatus_F_contig1381.2807.1 vs. uniprot
Match: W7TES1_9STRA (Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TES1_9STRA)

HSP 1 Score: 161 bits (407), Expect = 4.150e-41
Identity = 95/244 (38.93%), Postives = 142/244 (58.20%), Query Frame = 3 
Query:  129 VLLFGLSGNPPTGRDGHGGMIEYFVNLERFSEIWVLPVYKHMFSVKRKAMAQTGAPTYEDRIEMCRLAF--------ESYS----------TASCRVRVLRTEQEVFAEMIN---SQGAGP--ARSSTYDVVVYLKKQHPDIEFSLLLGTDTYQDLRKGKWRKSEELMSMVSLVIVDRMGV--RPETENLLS-GVELHHPPLLTDVSSTKIRDARAADLLEGSLAVETSVLRYMKDHSLYGFGR 782
            VLLFGLS NPPTG+ GH G++ +    +++ EIWV+PVYKHM +   + +       +EDR +MCRL F         SYS          T   RV+V+R E+EV    I    ++G GP   +  T DVV+Y K++ P+ +FSL+LGTDT+ D+++GKW++  EL+ +VS+V++ R GV   P+ +  L+  +  ++ P L +VSST +R      LL   L  E  VL Y+++  LY  GR
Sbjct:   68 VLLFGLSANPPTGQAGHAGIVRFLREQDQWDEIWVMPVYKHMHAKNHQLV------DFEDRYQMCRLNFTCPSSYGASSYSASPPSAKGPPTTRTRVKVVRLEKEVAKNFIAEAAARGQGPETVKVGTIDVVLYAKERMPNTDFSLVLGTDTFNDMKRGKWKRGRELLDLVSVVVISRPGVPYAPQEDEFLNHNLHFYNVPSLGEVSSTAVRKTTDLRLLREVL--EPRVLEYIRERGLYTIGR 303
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BLAST of mRNA_E-fasciculatus_F_contig1381.2807.1 vs. uniprot
Match: A0A6G0XR91_9STRA (Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XR91_9STRA)

HSP 1 Score: 155 bits (391), Expect = 5.300e-41
Identity = 88/219 (40.18%), Postives = 130/219 (59.36%), Query Frame = 3 
Query:  126 KVLLFGLSGNPPTGRDGHGGMIEYFVNLERFSEIWVLPVYKHMFSVKRKAMAQTGAPTYEDRIEMCRLAFESYSTASCRVRVLRTEQEVFAEMINSQGAGPA--RSSTYDVVVYLKKQHPDIEFSLLLGTDTYQDLRKGKWRKSEELMSMVSLVIVDRMGVRPETENLLSGVELHHPPLLTDVSSTKIRDARAADLLEGSLAVETSVLRYMKDHSLYGF 776
            KVL+FG S NPP G  GH G++E+F   + F ++WVLPVY+H++S K+         +++ R  M  +A ++      RVR+  TE++V+ + +  +   P+  R  T D+VV+L+  +PDI+FS+LLG DT+ DL KGKW+   +L+ M+SLV++ R GV  E +     V   H P L D SSTK R +RA    +    V  SVL Y+K H LY F
Sbjct:    2 KVLVFGTSANPPCGMGGHMGLVEHFA--QEFDQVWVLPVYQHIYSSKQHL------ESFDHRFAMLEIARKAIPHGD-RVRIQTTEKDVWMKALEDKSVDPSSIRIGTVDIVVHLQATYPDIKFSMLLGADTFMDLLKGKWKGGLQLLDMLSLVVLPRAGV--ELDRSHPNVTFVHVPTLDDSSSTKARRSRA----DAEAVVLPSVLEYIKTHRLYAF 205
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BLAST of mRNA_E-fasciculatus_F_contig1381.2807.1 vs. uniprot
Match: K3WUW0_GLOUD (Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUW0_GLOUD)

HSP 1 Score: 155 bits (392), Expect = 5.700e-41
Identity = 96/229 (41.92%), Postives = 136/229 (59.39%), Query Frame = 3 
Query:  120 MQKVLLFGLSGNPPTGRDGHGGMIEYFVNLERFSEIWVLPVYKHMFSVKRKAMAQTGAPTYEDRIEMCRLAFESYSTAS-CRVRVLRTEQEVFAEMINSQGAGPA--RSSTYDVVVYLKKQHPDIEFSLLLGTDTYQDLRKGKWRKSEELMSMVSLVIVDRMGV-----RPETENLLSG--VELHHPPLLTDVSSTKIRDARAADLLEGSLAVETSVLRYMKDHSLYGF 776
            M++VLL+G S NPPTG   H G + Y  +L  F E+W+LPVY+H++S KR+      AP +  R++MC+L        +   V+V   E+E+F E + +Q A P   R  + D++ YL++QHPD  F+LLLG DTY DLR GKW+  +EL ++V L+++DR GV     + E EN  S   V   H P L+D+SSTK+R  R  D+ E    V   V  Y+  H LYGF
Sbjct:    1 MKEVLLYGTSANPPTGLQAHMGAVAYCRSL--FDEVWLLPVYQHIYSSKRQL-----AP-FPHRVQMCKLVTNVLPKDNGALVKVQECERELF-EHLAAQTAAPEELRIGSIDLIKYLREQHPDASFTLLLGADTYNDLRTGKWKNGDELQTLVKLLVMDRKGVDAPSQQHENENATSTDRVRFIHIPGLSDLSSTKVRATR--DVNELRSFVGADVAEYIVHHRLYGF 218
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1381.2807.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL12_ECTSI1.190e-18492.25Nicotinamide-nucleotide adenylyltransferase n=2 Ta... [more]
A0A835ZEG0_9STRA2.600e-6549.33Nicotinamide-nucleotide adenylyltransferase n=1 Ta... [more]
H3GJQ3_PHYRM2.080e-4343.30Nicotinamide-nucleotide adenylyltransferase n=1 Ta... [more]
G4ZH97_PHYSP4.190e-4342.11Nicotinamide-nucleotide adenylyltransferase n=1 Ta... [more]
A0A6A3F4I0_9STRA2.000e-4243.17Nicotinamide-nucleotide adenylyltransferase n=2 Ta... [more]
A0A7S3M000_9STRA3.010e-4239.08Nicotinamide-nucleotide adenylyltransferase n=1 Ta... [more]
A0A024UBZ2_9STRA3.230e-4142.41Nicotinamide-nucleotide adenylyltransferase n=2 Ta... [more]
W7TES1_9STRA4.150e-4138.93Nicotinamide-nucleotide adenylyltransferase n=1 Ta... [more]
A0A6G0XR91_9STRA5.300e-4140.18Nicotinamide-nucleotide adenylyltransferase n=1 Ta... [more]
K3WUW0_GLOUD5.700e-4141.92Nicotinamide-nucleotide adenylyltransferase n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1381contigE-fasciculatus_F_contig1381:3497..8652 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score523.9
Seed ortholog evalue4.8e-146
Seed eggNOG ortholog2880.D7FL12
EggNOG free text desc.Cytidylyltransferase-like
EggNOG OGs2RY55@2759,COG1057@1
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons7
Model size1421
Cds size849
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927875.3947673-UTR-E-fasciculatus_F_contig1381:3496..39491622927875.3947673-UTR-E-fasciculatus_F_contig1381:3496..3949Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1381 3497..3949 -
1695995733.0090716-UTR-E-fasciculatus_F_contig1381:3496..39491695995733.0090716-UTR-E-fasciculatus_F_contig1381:3496..3949Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1381 3497..3949 -
1622927875.5018182-UTR-E-fasciculatus_F_contig1381:8533..86521622927875.5018182-UTR-E-fasciculatus_F_contig1381:8533..8652Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1381 8534..8652 -
1695995733.0832458-UTR-E-fasciculatus_F_contig1381:8533..86521695995733.0832458-UTR-E-fasciculatus_F_contig1381:8533..8652Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1381 8534..8652 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927875.4116077-CDS-E-fasciculatus_F_contig1381:3949..42131622927875.4116077-CDS-E-fasciculatus_F_contig1381:3949..4213Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1381 3950..4213 -
1695995733.0207136-CDS-E-fasciculatus_F_contig1381:3949..42131695995733.0207136-CDS-E-fasciculatus_F_contig1381:3949..4213Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1381 3950..4213 -
1622927875.421995-CDS-E-fasciculatus_F_contig1381:4801..49141622927875.421995-CDS-E-fasciculatus_F_contig1381:4801..4914Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1381 4802..4914 -
1695995733.0308976-CDS-E-fasciculatus_F_contig1381:4801..49141695995733.0308976-CDS-E-fasciculatus_F_contig1381:4801..4914Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1381 4802..4914 -
1622927875.4344132-CDS-E-fasciculatus_F_contig1381:5655..57581622927875.4344132-CDS-E-fasciculatus_F_contig1381:5655..5758Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1381 5656..5758 -
1695995733.0398824-CDS-E-fasciculatus_F_contig1381:5655..57581695995733.0398824-CDS-E-fasciculatus_F_contig1381:5655..5758Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1381 5656..5758 -
1622927875.4473934-CDS-E-fasciculatus_F_contig1381:6130..61941622927875.4473934-CDS-E-fasciculatus_F_contig1381:6130..6194Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1381 6131..6194 -
1695995733.0503597-CDS-E-fasciculatus_F_contig1381:6130..61941695995733.0503597-CDS-E-fasciculatus_F_contig1381:6130..6194Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1381 6131..6194 -
1622927875.4616032-CDS-E-fasciculatus_F_contig1381:6594..66931622927875.4616032-CDS-E-fasciculatus_F_contig1381:6594..6693Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1381 6595..6693 -
1695995733.0593219-CDS-E-fasciculatus_F_contig1381:6594..66931695995733.0593219-CDS-E-fasciculatus_F_contig1381:6594..6693Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1381 6595..6693 -
1622927875.4745917-CDS-E-fasciculatus_F_contig1381:6825..69401622927875.4745917-CDS-E-fasciculatus_F_contig1381:6825..6940Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1381 6826..6940 -
1695995733.06704-CDS-E-fasciculatus_F_contig1381:6825..69401695995733.06704-CDS-E-fasciculatus_F_contig1381:6825..6940Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1381 6826..6940 -
1622927875.4889736-CDS-E-fasciculatus_F_contig1381:8442..85331622927875.4889736-CDS-E-fasciculatus_F_contig1381:8442..8533Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1381 8443..8533 -
1695995733.075287-CDS-E-fasciculatus_F_contig1381:8442..85331695995733.075287-CDS-E-fasciculatus_F_contig1381:8442..8533Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1381 8443..8533 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1381.2807.1prot_E-fasciculatus_F_contig1381.2807.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1381 3950..8533 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1381.2807.1

>prot_E-fasciculatus_F_contig1381.2807.1 ID=prot_E-fasciculatus_F_contig1381.2807.1|Name=mRNA_E-fasciculatus_F_contig1381.2807.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=283bp
MQKVLLFGLSGNPPTGRDGHGGMIEYFVNLERFSEIWVLPVYKHMFSVKR
KAMAQTGAPTYEDRIEMCRLAFESYSTASCRVRVLRTEQEVFAEMINSQG
AGPARSSTYDVVVYLKKQHPDIEFSLLLGTDTYQDLRKGKWRKSEELMSM
VSLVIVDRMGVRPETENLLSGVELHHPPLLTDVSSTKIRDARAADLLEGS
LAVETSVLRYMKDHSLYGFGRQSRLEKLLMAASDRCSSVFSEERRWMVIA
GTAAVVVTVGVLRVVGRFRDGGVRGGRACSVP*
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mRNA from alignment at E-fasciculatus_F_contig1381:3497..8652-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1381.2807.1 ID=mRNA_E-fasciculatus_F_contig1381.2807.1|Name=mRNA_E-fasciculatus_F_contig1381.2807.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5156bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1381:3497..8652- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TTTTGACACAGACCGGCACCCACAGCTGCTTGTAGCGCGTGGACACGGCA
TCCCAGCTGCACTACACCCAATTTCATTGCATCTCTCTCGGCTTGGTGTT
GGTGGAGAGCATCGCAGAGATGCAGAAAGTTCTGCTGTTCGGATTGTCAG
GGAACCCCCCGACAGGCCGAGATGGGCACGGCGGCATGATTGAGTACTTC
GTCAACCTAGGTGTGTGTTGCGGTGTCCCATGCAGTGCTTCGAGTGGTGT
GGTGTCTGCCCCGTGGCTCCTGTTTCGGAGTTGGATCAGCGAGATTGCTA
GCGTCAAAAGTGTAGAGGAACTTCTATTGCTGTGTGCACCAACACCAAGC
CAATGTGTTTGAACTCGCAATTGTGGGTGTGCTACATGTATGTGTTTTGG
GAAGTGCGTGCAGCAAGCGAGACATGACCAAGTAGACTAGAGTTCAAACT
TGGCAGCGACCATCGACTTTCAACATGTACTGGGGCACGGGTTGTACCAA
CGCCGACCCTTTGGCAAGGTCCGCGTCTACATGGATGCAGAGCATGCAGT
AGGATGTCTTAGACTTTGTGAGGGTGCTTCTTGTGTTATCTTCAAATGTT
TTTTCAAATTTCGTTTTGGGAGTTGTGCCGGTCAGAGCCTTTATGTAGCG
AGACCTCATGATGGATTGTAGGAAGCGCCTGATTTCTTTGGTTCTCGACG
CTTCAAAACACACGGCAGTGACTTGCAACTCAGAGCCTGCGTGAGTGCCT
GTGATCACCAACTTCGACATGGCTCGCTTCTCATATGGCACCCTACTCGT
CGCTGTGATCAATTTGAAGCCCGGGGTCTTGCACAGCACTACAGCAAAGC
CTCGGGTACAGCAGTACTACTGCTTGCTGTACATATAGGAGTAGTCCTGA
GTAATCAAATGGTCGCCGCACGGCTGGGGGTCTTATCTACGTACCTGGAG
TACCGTTTATTCACACGCGAAAAGTGCGGAGGGAGGTCTTTATCGCGATT
GTAGATGCGTAGTATGGAATGTAGCATAATACAAAAGTTAAGCTTGGAAA
ACAAAAGAATGTCAGGCTTTTCCTGTTTCACTGCAGAGGGGAGAGCTGGA
CAATTCCCCCGCGTGCCAAAGTTGCAGACGAGCGTGTCCGTCCCGTAGAC
AGCAGGATTTGCACTGCTGCTGATGTCCGAGTGTTGGCAACTTGTTAGCA
GCCCTGTTCAGCACTGTGGGCAAGTGTTGTAGAGAAGACTCGGCTTTCTC
TGTCTGCCTGCCTGTCTGCCTGTCTTCCTGTCTGTCTATGTATCTGTCTA
CCTGTCTGTCTGTCTGCCTGTCTGCCTGCCCGCCTCTGCCGCGGTGTGTG
CGTGCGTACTATGTGTATTACCGGCGCAACCACTCTGGGCGTTGTGTTTC
TGTGTGGAAACGAAAAAATGTTTCCGTACAAGTGATCCCTTCGGAGCGGG
CTCATGAAAGCACAGCAGTGTCATCAAGGGGTGACGCAAGATGAGAATAA
AGGCAGCCAGCAGGACTAACCCACAGCTGAGTGCCAGCTGCGGTGTGACG
TTTCCTAAGCTCAACAGCTCGCACAGATGACATGCTGATTTATCTCACCC
TCTCCCGCCCCCTTCCCTCTCCCTGTCCGTCCCCCTCCCTCCATCTTATC
TCCGATGGAACAAACGGAACGTTCGAAACCGACCGTATAATCGCACGCGA
CGGAGCACTCAGAGCGGTTCAGCGAGATCTGGGTCCTCCCCGTTTACAAG
CACATGTTCTCCGTCAAGCGAAAAGCAATGGCGCAGACGGGCGCCCCGAC
GTACGAGGACAGAATAGAGATGTGCAGGTAAGGAAACCTTTGACCCTTGC
GCTCTGCCTCCCGTCATAACCCGTCGCTGTGATGTCTCTTCGTCGTCGGC
TCATCGCGGATGATAAAACGAAGTCCCGTTTTCTTTTGGCGGCCGATTTC
CATACCCAGGCTCGCCTTCGAAAGCTACTCCACCGCGAGCTGCAGGGTGC
GTGTGTTAAGAACGGAGCAGGAGGTTTTCGCGGAGATGATCAACTCTCAA
GGGGCCGGGTGAGGCTTGGCGTCCCGCTTCAACGTTTCGCTCCCGCCCTT
CGGTAGCTCTAGAGAGGCGTGCGTACGTACTTCCTGTCCGCAAGTCGTGC
AGTTGATGATTTTTCTTTTTCGTTAGTCTCGGCAAGGCGTGTACACCGTA
CGGCAAGACGTTACGGGTGAGGGCTAATTTTGAGCAGCTTGCACCCCCCG
GGATCCACATGCGGGGGGGTTCAGAGCCCAGCTCCACGCCCTCCGCTGTA
GCATGTCGCTCGAGTAGGGTGGTTCGAAAGTTGGCACTCCCCGACGGCTT
GTAGACGCGTACCTTTTGCCCGGCGCAAACAGAATGCACGCGCGATGGTC
TCACGACCCCCCCCCCCCGGCCTCTGTAAACACGGGTTTTGTAACATGAA
ACCAAAAGGCCAGCGCGGTCAAGCACCTACGACGTGGTGGTCTACCTGAA
GAAGCAACACCCCGACATTGAGGTAAGAGAGACCGCTTGTTTGCTTGCCG
CACACGCTGGAATGTGTCATGAGCTCTATAAGTGAACCCACGACTTCCTC
AGCCCCCCCCTCTGCTTCGATGAGGGATACCCTGCCCCCTCCCTCGCCCC
CGTCCTCTCATCATCGTTGCGTAGCCTACAGCAGTGGGGGTCCCCGTAAA
AAGGCGGGCTAAGTATGGCGGCTGCCCTATAGAAGGCGGGCGAAATTGGC
TGTCATAGACGGCATAATCAAGATTGCTCTACACATTGAATATAACCGGC
TGCTCCATATATGGCCAGCTGCCCCCACCACCGTCATATTCGGGGATCCC
CACTGCTTTTGTCATGCTTTGCCTGTGGTGCGTCGCGGCAACAGTTCTCG
TTGCTGCTTGGGACGGACACGTACCAAGACCTCCGCAAGGGGAAGTGGCG
CAAGTCCGAGGAGCTCATGAGCATGGTGTCCTTGGTCATCGTCGATAGTG
AGTCACGTCACCTCATCAGGATCGAGTCGAGACGCTGCTATCTCTGTTAT
TTTTGTTTCTTTTAATTCAGCGCTCACCGCATTTCTGCCGGGTAAGAGCT
CCAATCCGAGGTCGCACAGATGGGTAAGGCTTCCTCTCCCTGAGGCCCCC
TACCATCTCCTCCTGTGGTGCTTGCCTTCCTTCGACTTTTCACGCGAGAA
GAGTGCGGCACTATTTCGCCTCAAAGTGTACACATGAGCTAGCGCTTTCC
ACTCAATGGACAACGTATGTCTGAAATGGCATCCATGATACTTTTCGGGG
GGGTTGCTGTATTGCTGGGCAAGTGAGCAGGACTACAGTGCGGTAGGAGT
ACCATTTAGCAGTGGTGCGTGCTGTAGGCGATGTTCTCCTTCAAATTCCG
GGAAGATTTATACGACGGCAGCAGTCACGTAGTCGGGGGTTTTGGTACAC
GACAGCATTTTGTGGCTATCTGTGCAATACCAACTAAAGTTAGACTTGTT
CTTGTCGCTTGTATGCCCTTGGCACCTTGAACTCACGTTGCCAAGTTATT
TTTGTTAGTTAGCATTTCCTCCCACCACTTCCTGCTCTCCACCCCCCCCA
TCCCTGTCCGCGCCTGGTAGAATTACGAGTGTCTGCATCGCTAGCCAAAG
GGACAAATCTAGCAACAAATGCCTTCATTCCCTCATTGTGCTCGGGACTC
GTTGTCTTCCCCGAACCTTTGACTCCACTGTGCGGCAGGAATGGGAGTGC
GGCCCGAGACGGAGAATCTTCTCTCTGGAGTAGAGCTGCACCACCCGCCC
TTGCTCACGGATGTCTCGTCGACAAAAATTCGGGACGCAAGAGCGGCAGA
TGTGAGATTTGTTTTACGCAAGGGGGGGGGGCAGGGATGAGGAAGGAGGG
GGAGGAGGAGGAGGCGGGGGAGGAGGGGAAACACACAAGTATCCCTTTGG
CCGCCCAAGCTGTTGTGCTTTCGATCTGCCGCTCAAGCCATCATCGTCCT
CCTGTGACGACATGGATGTCGATCCGAGAAAGCTTGCCGTTGTGGTCGGA
TCCACGTCCCGTGCTTTCGGCATATATTTGGATGGATTCAATAGAGCACT
TGCATGGCTGACGCCCGCAAGTCAAGGAAGAGGTAGTCAAAACATCTTCC
ACATGTCTGTCTGCTAGAACCGTGCAAGAGACACACCCATATTTGAAGAC
CACGCTTCATGTATCAATAGCAACCGGCTGCATTCAACACCGGGTACCCA
TTTCAAGCTACACTCCTTCCCTCGACGTTGTCACCTGCATTTTCAGCCAC
GCCTCTTAGCTCTCGGTGAAAGCGTCCCCTATCCTTTTGTGCGGTTATTA
ATATTTCCCACCGAATCAAGCACTTTCTACTGGATTCTCAACCTTGTCTT
GATTTGTCGGCCGCTTCTTTTATTTAAACACGGACGCAGCTGCTGGAAGG
CTCGCTGGCGGTAGAGACCTCGGTCCTGCGGTACATGAAAGACCACAGCC
TCTACGGCTTCGGCCGGCAGTCGCGGCTGGAGAAGTTGCTCATGGCGGCC
TCAGATCGGTGCTCGTCGGTCTTCTCGGAGGAGCGGCGGTGGATGGTGAT
CGCGGGCACGGCAGCGGTGGTGGTGACCGTCGGAGTGTTGCGGGTTGTCG
GCCGATTTCGGGACGGCGGCGTTCGAGGGGGGAGAGCCTGCTCGGTTCCC
TAGGAGGAGGGAACATACTCGGCCTGAACGATTCTGATTTGCCGGCTTGT
CGTAAGAAAGGGCTGTGGCAGTAGCCTATGTTCGTACCGTTTCCGTTCGT
TTCGGTGGAATGGTTTTCGCGTTGATGGGGAAGAGTCTGCCCTGCGCCGG
GCATGACCTTGTTTCATTTTCCTTCTGTTTGGTACTCCCGCCGCGTGTGT
GATTCTGCATCACCACGATGTGATGTTTGTGTTTCGGTGGTGTGGGTTGT
GCGGTGTATTCGTAGCAAAATGTGTGTGTGGATGAGTTGGTGGTATCTAC
GGAGATCGCAGTCGATAAGGTGCGGGGGAACATTGGCTTTGACCTGTTGC
ACGCTTCCCACGAGCCACGTGAGTGAATTCCTAACGAGAGAAACCGCGAA
GCAGCAGGGAAATCGCCTGGTGGAGGAACTCCAGCCGTGTGGGGGCTGTG
GAGGAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1381:3497..8652-

>mRNA_E-fasciculatus_F_contig1381.2807.1 ID=mRNA_E-fasciculatus_F_contig1381.2807.1|Name=mRNA_E-fasciculatus_F_contig1381.2807.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1698bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1381:3497..8652- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCAGAAAGTTCTGCTGTTCGGATTGTCAGGGAACCCCCCGACAGGCCG
AGATGGGCACGGCGGCATGATTGAGTACTTCGTCAACCTAGATGCAGAAA
GTTCTGCTGTTCGGATTGTCAGGGAACCCCCCGACAGGCCGAGATGGGCA
CGGCGGCATGATTGAGTACTTCGTCAACCTAGAGCGGTTCAGCGAGATCT
GGGTCCTCCCCGTTTACAAGCACATGTTCTCCGTCAAGCGAAAAGCAATG
GCGCAGACGGGCGCCCCGACGTACGAGGACAGAATAGAGATGTGCAGAGC
GGTTCAGCGAGATCTGGGTCCTCCCCGTTTACAAGCACATGTTCTCCGTC
AAGCGAAAAGCAATGGCGCAGACGGGCGCCCCGACGTACGAGGACAGAAT
AGAGATGTGCAGGCTCGCCTTCGAAAGCTACTCCACCGCGAGCTGCAGGG
TGCGTGTGTTAAGAACGGAGCAGGAGGTTTTCGCGGAGATGATCAACTCT
CAAGGGGCCGGGCTCGCCTTCGAAAGCTACTCCACCGCGAGCTGCAGGGT
GCGTGTGTTAAGAACGGAGCAGGAGGTTTTCGCGGAGATGATCAACTCTC
AAGGGGCCGGGCCAGCGCGGTCAAGCACCTACGACGTGGTGGTCTACCTG
AAGAAGCAACACCCCGACATTGAGGCCAGCGCGGTCAAGCACCTACGACG
TGGTGGTCTACCTGAAGAAGCAACACCCCGACATTGAGTTCTCGTTGCTG
CTTGGGACGGACACGTACCAAGACCTCCGCAAGGGGAAGTGGCGCAAGTC
CGAGGAGCTCATGAGCATGGTGTCCTTGGTCATCGTCGATATTCTCGTTG
CTGCTTGGGACGGACACGTACCAAGACCTCCGCAAGGGGAAGTGGCGCAA
GTCCGAGGAGCTCATGAGCATGGTGTCCTTGGTCATCGTCGATAGAATGG
GAGTGCGGCCCGAGACGGAGAATCTTCTCTCTGGAGTAGAGCTGCACCAC
CCGCCCTTGCTCACGGATGTCTCGTCGACAAAAATTCGGGACGCAAGAGC
GGCAGATGAATGGGAGTGCGGCCCGAGACGGAGAATCTTCTCTCTGGAGT
AGAGCTGCACCACCCGCCCTTGCTCACGGATGTCTCGTCGACAAAAATTC
GGGACGCAAGAGCGGCAGATCTGCTGGAAGGCTCGCTGGCGGTAGAGACC
TCGGTCCTGCGGTACATGAAAGACCACAGCCTCTACGGCTTCGGCCGGCA
GTCGCGGCTGGAGAAGTTGCTCATGGCGGCCTCAGATCGGTGCTCGTCGG
TCTTCTCGGAGGAGCGGCGGTGGATGGTGATCGCGGGCACGGCAGCGGTG
GTGGTGACCGTCGGAGTGTTGCGGGTTGTCGGCCGATTTCGGGACGGCGG
CGTTCGAGGGGGGAGAGCCTGCTCGGTTCCCTAGCTGCTGGAAGGCTCGC
TGGCGGTAGAGACCTCGGTCCTGCGGTACATGAAAGACCACAGCCTCTAC
GGCTTCGGCCGGCAGTCGCGGCTGGAGAAGTTGCTCATGGCGGCCTCAGA
TCGGTGCTCGTCGGTCTTCTCGGAGGAGCGGCGGTGGATGGTGATCGCGG
GCACGGCAGCGGTGGTGGTGACCGTCGGAGTGTTGCGGGTTGTCGGCCGA
TTTCGGGACGGCGGCGTTCGAGGGGGGAGAGCCTGCTCGGTTCCCTAG
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