prot_E-fasciculatus_F_contig13809.2806.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-fasciculatus_F_contig13809.2806.1
Unique Name	prot_E-fasciculatus_F_contig13809.2806.1
Type	polypeptide
Organism	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length	182

Homology

[Close]

BLAST of mRNA_E-fasciculatus_F_contig13809.2806.1 vs. uniprot
Match: D7FQL3_ECTSI (Tyrosine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQL3_ECTSI)

HSP 1 Score: 299 bits (765), Expect = 4.440e-98
Identity = 142/150 (94.67%), Postives = 147/150 (98.00%), Query Frame = 0

Query:   33 GKGKSSSKGSKDVVLEAPPFDVSQLKPSECSLEERYALCRSVADECIQEEELKRLLEARAHPVCYDGFEPSGRMHIAQGVMRVINVNKLTKAGCHFKFWVADWFAQLNNKMGGDLKKIQTVGKYMIEIWKATGMDMNNVEFLWASEEVRR 182
            GKGKSS+KG+K+VVLEAPPFDVSQLK SECSLEERY LCRSVADECIQEEELKRLLEARAHP+CYDGFEPSGRMHIAQGVMRVINVNKLTKAGCHFKFWVADWFAQLNNKMGGDLKKIQTVGKYMIEIWKATGMDMNNVEFLWASEE+ R
Sbjct:   53 GKGKSSNKGTKEVVLEAPPFDVSQLKASECSLEERYELCRSVADECIQEEELKRLLEARAHPICYDGFEPSGRMHIAQGVMRVINVNKLTKAGCHFKFWVADWFAQLNNKMGGDLKKIQTVGKYMIEIWKATGMDMNNVEFLWASEEINR 202

[Close]

BLAST of mRNA_E-fasciculatus_F_contig13809.2806.1 vs. uniprot
Match: A0A835YH37_9STRA (Tyrosine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH37_9STRA)

HSP 1 Score: 236 bits (602), Expect = 1.430e-73
Identity = 113/149 (75.84%), Postives = 126/149 (84.56%), Query Frame = 0

Query:   37 SSSKG---SKDVVLEAPPFDVSQLKPSECSLEERYALCRSVADECIQEEELKRLLEARAHPVCYDGFEPSGRMHIAQGVMRVINVNKLTKAGCHFKFWVADWFAQLNNKMGGDLKKIQTVGKYMIEIWKATGMDMNNVEFLWASEEVRR 182
            +S+KG   + D  + APPFD S L  SE SL+ER+ LCRSVA+ECIQE+EL RLLE + HP+ YDGFEPSGRMHIAQGVMR +NVNKLTKAGCHFKFWVADWFAQLNNKMGGDL KIQ VGKYMIEIWKA GMDM NV+FLWASEE+ R
Sbjct:   49 ASAKGPAPAADSTIGAPPFDPSNLVKSELSLQERFDLCRSVAEECIQEDELMRLLEFKDHPIVYDGFEPSGRMHIAQGVMRALNVNKLTKAGCHFKFWVADWFAQLNNKMGGDLAKIQVVGKYMIEIWKAVGMDMRNVQFLWASEEINR 197

[Close]

BLAST of mRNA_E-fasciculatus_F_contig13809.2806.1 vs. uniprot
Match: A0A1V9ZR79_9STRA (Tyrosine--tRNA ligase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZR79_9STRA)

HSP 1 Score: 210 bits (534), Expect = 1.470e-63
Identity = 96/135 (71.11%), Postives = 117/135 (86.67%), Query Frame = 0

Query:   46 VLEAPPFDVSQLKPSECSLEERYALCRSVADECIQEEELKRLLEARAHPVCYDGFEPSGRMHIAQGVMRVINVNKLTKAGCHFKFWVADWFAQLNNKMGGDLKKIQTVGKYMIEIWKATGMDMNNVEFLWASEEV 180
            V E+   +V + K SE SL+ER+ LCRSV +ECI+EEEL+ LLE + HP+CYDGFEPSGRMHIAQG++RVINVN+LT AGC F+FWVADWFA LNNKMGGDLKKI+ VG+YMIEIWKA GM+M+NV+FLWAS+E+
Sbjct:   42 VYESKLAEVREWKKSELSLDERFELCRSVGEECIKEEELRLLLEKKDHPICYDGFEPSGRMHIAQGILRVINVNRLTSAGCIFRFWVADWFALLNNKMGGDLKKIRKVGQYMIEIWKAAGMNMDNVQFLWASDEI 176

[Close]

BLAST of mRNA_E-fasciculatus_F_contig13809.2806.1 vs. uniprot
Match: C1N2M7_MICPC (Tyrosine--tRNA ligase n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N2M7_MICPC)

HSP 1 Score: 208 bits (529), Expect = 4.300e-63
Identity = 93/134 (69.40%), Postives = 114/134 (85.07%), Query Frame = 0

Query:   49 APPFDVSQLKPSECSLEERYALCRSVADECIQEEELKRLLEARAHPVCYDGFEPSGRMHIAQGVMRVINVNKLTKAGCHFKFWVADWFAQLNNKMGGDLKKIQTVGKYMIEIWKATGMDMNNVEFLWASEEVRR 182
            APP +      S+ +L+E+Y LCRSV +ECIQEEEL+ LL+ +  PVCYDGFEPSGRMHIAQGVM+ +NVNKLTKAGCHFKFWVADWFA +NNKMGGDLKKIQ VG+YM+E+WKA GMD++ VEF+W+SEE+ +
Sbjct:   26 APPLE------SDLTLDEKYELCRSVGEECIQEEELRNLLDKKPVPVCYDGFEPSGRMHIAQGVMKCLNVNKLTKAGCHFKFWVADWFALMNNKMGGDLKKIQKVGQYMVEVWKAVGMDLSRVEFIWSSEEINK 153

[Close]

BLAST of mRNA_E-fasciculatus_F_contig13809.2806.1 vs. uniprot
Match: A0A024TVJ6_9STRA (Tyrosine--tRNA ligase n=9 Tax=Aphanomyces TaxID=100860 RepID=A0A024TVJ6_9STRA)

HSP 1 Score: 209 bits (531), Expect = 4.590e-63
Identity = 99/149 (66.44%), Postives = 122/149 (81.88%), Query Frame = 0

Query:   37 SSSKGSKDV-----VLEAPPFDVSQLKPSECSLEERYALCRSVADECIQEEELKRLLEARAHPVCYDGFEPSGRMHIAQGVMRVINVNKLTKAGCHFKFWVADWFAQLNNKMGGDLKKIQTVGKYMIEIWKATGMDMNNVEFLWASEEV 180
            ++SK SK V     V E+   +V   K S  +L+ER+ LC+SV +ECI+EEEL+ LLE + HP+CYDGFEPSGRMHIAQGV+R+INVNKLT AGC F+FWVADWFA LNNKMGGDLKKI+ VG+YMIEIWKA GM+M+NV+FLWAS+E+
Sbjct:   32 ATSKSSKKVAAAPTVYESRLHEVRDWKKSTLTLDERFELCKSVGEECIKEEELRALLEKKEHPICYDGFEPSGRMHIAQGVLRMINVNKLTSAGCIFRFWVADWFALLNNKMGGDLKKIRKVGQYMIEIWKAVGMNMDNVQFLWASDEI 180

[Close]

BLAST of mRNA_E-fasciculatus_F_contig13809.2806.1 vs. uniprot
Match: C1DZ57_MICCC (Tyrosine--tRNA ligase n=2 Tax=Micromonas TaxID=38832 RepID=C1DZ57_MICCC)

HSP 1 Score: 204 bits (518), Expect = 8.170e-62
Identity = 89/120 (74.17%), Postives = 107/120 (89.17%), Query Frame = 0

Query:   63 SLEERYALCRSVADECIQEEELKRLLEARAHPVCYDGFEPSGRMHIAQGVMRVINVNKLTKAGCHFKFWVADWFAQLNNKMGGDLKKIQTVGKYMIEIWKATGMDMNNVEFLWASEEVRR 182
            +L+ERY LCRSV +ECIQE EL+ LL+ +  PVCYDGFEPSGRMHIAQGVM+ +NVNKLTKAGCHFKFWVADWFA +NNKMGGDLKKIQ VG+YM+E+WKA GMD++ VEF+W+SEE+ +
Sbjct:    2 TLDERYELCRSVGEECIQEAELRNLLDKKPVPVCYDGFEPSGRMHIAQGVMKCLNVNKLTKAGCHFKFWVADWFALMNNKMGGDLKKIQKVGQYMVEVWKAVGMDLSRVEFIWSSEEINK 121

[Close]

BLAST of mRNA_E-fasciculatus_F_contig13809.2806.1 vs. uniprot
Match: A0A250XKU7_9CHLO (Tyrosine--tRNA ligase n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XKU7_9CHLO)

HSP 1 Score: 204 bits (520), Expect = 8.920e-62
Identity = 96/124 (77.42%), Postives = 110/124 (88.71%), Query Frame = 0

Query:   59 PSECSLEERYALCRSVADECIQEEELKRLLEARAHPVCYDGFEPSGRMHIAQGVMRVINVNKLTKAGCHFKFWVADWFAQLNNKMGGDLKKIQTVGKYMIEIWKATGMDMNNVEFLWASEEVRR 182
            PS  +LEER+ LCRSVA+ECI E+EL+RLL  +  P+ YDGFEPSGRMHIAQGVM+ INVNKLTKAGCHFKFWVADWFAQLNNKMGGDLKKIQTVGKYMIE+WKA GMD++ VEFL +SEE+ +
Sbjct:   28 PSGLTLEERFQLCRSVAEECISEDELRRLLN-KPMPIAYDGFEPSGRMHIAQGVMKAINVNKLTKAGCHFKFWVADWFAQLNNKMGGDLKKIQTVGKYMIEVWKAVGMDLSKVEFLSSSEEINK 150

[Close]

BLAST of mRNA_E-fasciculatus_F_contig13809.2806.1 vs. uniprot
Match: A0A7S0WP34_9CHLO (Tyrosine--tRNA ligase n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WP34_9CHLO)

HSP 1 Score: 204 bits (520), Expect = 1.130e-61
Identity = 94/124 (75.81%), Postives = 111/124 (89.52%), Query Frame = 0

Query:   59 PSECSLEERYALCRSVADECIQEEELKRLLEARAHPVCYDGFEPSGRMHIAQGVMRVINVNKLTKAGCHFKFWVADWFAQLNNKMGGDLKKIQTVGKYMIEIWKATGMDMNNVEFLWASEEVRR 182
            PS  +LEER+ LCRSVA+ECI ++EL+RLL+ +  PV YDGFEPSGRMHIAQGVM+ INVNKLTKAGC+FKFWVADWFAQLNNKMGGDLKKIQTVGKYM+E+WKA GMD++ VEFL +SEE+ +
Sbjct:   36 PSGLTLEERFQLCRSVAEECINDDELRRLLQNKPVPVAYDGFEPSGRMHIAQGVMKCINVNKLTKAGCNFKFWVADWFAQLNNKMGGDLKKIQTVGKYMVEVWKAVGMDLSKVEFLSSSEEINK 159

[Close]

BLAST of mRNA_E-fasciculatus_F_contig13809.2806.1 vs. uniprot
Match: A0A7S0GS04_MICPS (Tyrosine--tRNA ligase n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0GS04_MICPS)

HSP 1 Score: 204 bits (520), Expect = 1.660e-61
Identity = 92/134 (68.66%), Postives = 111/134 (82.84%), Query Frame = 0

Query:   49 APPFDVSQLKPSECSLEERYALCRSVADECIQEEELKRLLEARAHPVCYDGFEPSGRMHIAQGVMRVINVNKLTKAGCHFKFWVADWFAQLNNKMGGDLKKIQTVGKYMIEIWKATGMDMNNVEFLWASEEVRR 182
            APP D         +L+E++ALCRSV +ECIQEEEL+ LL+ +  PVCYDGFEPSGRMHIAQGVM+ +NVNKLT+AGCHFKFWVADWFA +NNKMGGDLKKIQ VG YM+E+WKA GMD+  VEF+W+SEE+ +
Sbjct:   47 APPVDTG------LTLDEKFALCRSVGEECIQEEELRNLLDKKPVPVCYDGFEPSGRMHIAQGVMKCLNVNKLTRAGCHFKFWVADWFALMNNKMGGDLKKIQKVGAYMVEVWKAIGMDLTRVEFIWSSEEINK 174

[Close]

BLAST of mRNA_E-fasciculatus_F_contig13809.2806.1 vs. uniprot
Match: A0A150GAJ1_GONPE (Tyrosine--tRNA ligase n=4 Tax=Chlamydomonadales TaxID=3042 RepID=A0A150GAJ1_GONPE)

HSP 1 Score: 204 bits (519), Expect = 1.770e-61
Identity = 95/124 (76.61%), Postives = 109/124 (87.90%), Query Frame = 0

Query:   59 PSECSLEERYALCRSVADECIQEEELKRLLEARAHPVCYDGFEPSGRMHIAQGVMRVINVNKLTKAGCHFKFWVADWFAQLNNKMGGDLKKIQTVGKYMIEIWKATGMDMNNVEFLWASEEVRR 182
            PS  SL+ER+AL RSVA+ECI +EEL+ LL  +  PV YDGFEPSGRMHIAQGVM+ INVNKLTKAGCHFKFWVADWFAQLNNKMGGDLKKIQTVGKYM+E+WKA GMD++ VEFL +SEE+ +
Sbjct:   40 PSGLSLDERFALARSVAEECISDEELRALLAKKPLPVAYDGFEPSGRMHIAQGVMKAINVNKLTKAGCHFKFWVADWFAQLNNKMGGDLKKIQTVGKYMVEVWKAVGMDLSKVEFLSSSEEINK 163

The following BLAST results are available for this feature:

BLAST of mRNA_E-fasciculatus_F_contig13809.2806.1 vs. uniprot

BLAST of mRNA_E-fasciculatus_F_contig13809.2806.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FQL3_ECTSI	4.440e-98	94.67	Tyrosine--tRNA ligase n=2 Tax=Ectocarpus TaxID=287...	[more]
A0A835YH37_9STRA	1.430e-73	75.84	Tyrosine--tRNA ligase n=1 Tax=Tribonema minus TaxI...	[more]
A0A1V9ZR79_9STRA	1.470e-63	71.11	Tyrosine--tRNA ligase n=3 Tax=Saprolegniaceae TaxI...	[more]
C1N2M7_MICPC	4.300e-63	69.40	Tyrosine--tRNA ligase n=1 Tax=Micromonas pusilla (...	[more]
A0A024TVJ6_9STRA	4.590e-63	66.44	Tyrosine--tRNA ligase n=9 Tax=Aphanomyces TaxID=10...	[more]
C1DZ57_MICCC	8.170e-62	74.17	Tyrosine--tRNA ligase n=2 Tax=Micromonas TaxID=388...	[more]
A0A250XKU7_9CHLO	8.920e-62	77.42	Tyrosine--tRNA ligase n=1 Tax=Chlamydomonas eustig...	[more]
A0A7S0WP34_9CHLO	1.130e-61	75.81	Tyrosine--tRNA ligase n=1 Tax=Chlamydomonas leiost...	[more]
A0A7S0GS04_MICPS	1.660e-61	68.66	Tyrosine--tRNA ligase n=1 Tax=Micromonas pusilla T...	[more]
A0A150GAJ1_GONPE	1.770e-61	76.61	Tyrosine--tRNA ligase n=4 Tax=Chlamydomonadales Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002305	Aminoacyl-tRNA synthetase, class Ic	PFAM	PF00579	tRNA-synt_1b	coord: 92..178 e-value: 6.2E-15 score: 55.3
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620		coord: 55..182 e-value: 3.5E-62 score: 212.2
None	No IPR available	PANTHER	PTHR46264:SF6	TYROSINE--TRNA LIGASE 2, CYTOPLASMIC	coord: 36..180
None	No IPR available	PANTHER	PTHR46264	FAMILY NOT NAMED	coord: 36..180
None	No IPR available	SUPERFAMILY	52374	Nucleotidylyl transferase	coord: 67..179

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-fasciculatus_F_contig13809	contig	E-fasciculatus_F_contig13809:33..2953 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-fasciculatus_F_contig13809.2806.1	mRNA_E-fasciculatus_F_contig13809.2806.1	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	mRNA	E-fasciculatus_F_contig13809 33..2953 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-fasciculatus_F_contig13809.2806.1 ID=prot_E-fasciculatus_F_contig13809.2806.1|Name=mRNA_E-fasciculatus_F_contig13809.2806.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=182bp
VTQDAGSASSSSGAAAAAAAAVGSSTTAAASSGKGKSSSKGSKDVVLEAP
PFDVSQLKPSECSLEERYALCRSVADECIQEEELKRLLEARAHPVCYDGF
EPSGRMHIAQGVMRVINVNKLTKAGCHFKFWVADWFAQLNNKMGGDLKKI
QTVGKYMIEIWKATGMDMNNVEFLWASEEVRR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014729	Rossmann-like_a/b/a_fold
IPR002305	aa-tRNA-synth_Ic