mRNA_E-fasciculatus_F_contig1380.2805.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1380.2805.1
Unique NamemRNA_E-fasciculatus_F_contig1380.2805.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1380.2805.1 vs. uniprot
Match: D7FRY1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRY1_ECTSI)

HSP 1 Score: 420 bits (1080), Expect = 7.190e-145
Identity = 219/224 (97.77%), Postives = 219/224 (97.77%), Query Frame = 1
Query:    1 VLQHKLALIRRQEGTAKDFRTLFREITFYLGYEATATLTTTSICVKTDRTDQCPAKTIAETVAVVPILRQASGGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALILDPIIASSRTINAVVSIVKKWGAKTIKVVTLVASRSGLEALNKMHPEVQVHLASIDELAPNGQDLIPGIGDAGDRLYLGTNSLETAPPPDVEVPTKKSKQST 672
            VLQHKLALIRRQEGTAKDFRTLFREITFYLGYEATATLTTTSICVKTDRTDQCPAKTIAETVAVVPILR   GGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALILDPIIASSRTINAVVSIVKKWGAKTIKVVTLVASRSGLEALNKMHPEVQVHLASIDELAPNGQDLIPGIGDAGDRLYLGTNSLETAPP DVEVPTKK KQST
Sbjct:   16 VLQHKLALIRRQEGTAKDFRTLFREITFYLGYEATATLTTTSICVKTDRTDQCPAKTIAETVAVVPILR---GGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALILDPIIASSRTINAVVSIVKKWGAKTIKVVTLVASRSGLEALNKMHPEVQVHLASIDELAPNGQDLIPGIGDAGDRLYLGTNSLETAPPSDVEVPTKKPKQST 236          
BLAST of mRNA_E-fasciculatus_F_contig1380.2805.1 vs. uniprot
Match: A0A835YL27_9STRA (Uracil phosphoribosyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL27_9STRA)

HSP 1 Score: 258 bits (660), Expect = 6.530e-81
Identity = 128/206 (62.14%), Postives = 164/206 (79.61%), Query Frame = 1
Query:    1 VLQHKLALIRRQEGTAKDFRTLFREITFYLGYEATATLTTTSICVKTDRTDQCPAKTIAETVAVVPILRQASGGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALILDPIIASSRTINAVVSIVKKWGAKTIKVVTLVASRSGLEALNKMHPEVQVHLASIDELAPNGQDLIPGIGDAGDRLYLGTNSLE 618
            VL HKL+LIRR+   +++FR+LFREI+FYLGYEAT  L T    + T   + C  + IA+ VAV+PILR   GGLGMT+A+LELLP++PVYH+GMYRNPGS++P+QYYNRLPKG   DVA++LDPIIAS++TI A VSI+KKWGA  +KVVTL+ SR+GL  L  +HP+V VH A++D LA NG DL+PGIGDAGDRLYLG + ++
Sbjct:   32 VLMHKLSLIRRKSTNSREFRSLFREISFYLGYEATQDLHTKVAHIHTHTAEFCEVRKIADKVAVIPILR---GGLGMTDAMLELLPNAPVYHIGMYRNPGSSMPIQYYNRLPKGQSCDVAILLDPIIASAKTICATVSIIKKWGAARVKVVTLIVSRTGLAQLLAVHPDVIVHCAAVDTLADNGHDLVPGIGDAGDRLYLGPDHVD 234          
BLAST of mRNA_E-fasciculatus_F_contig1380.2805.1 vs. uniprot
Match: A0A8K1CH49_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CH49_PYTOL)

HSP 1 Score: 182 bits (461), Expect = 1.730e-51
Identity = 101/199 (50.75%), Postives = 136/199 (68.34%), Query Frame = 1
Query:    1 VLQHKLALIRRQEGTAKDFRTLFREITFYLGYEATATLTTTSICVKTDRTDQCPAKTIAETVAVVPILRQASGGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALILDPIIASSRTINAVVSIVKKWGAKTIKVVTLVASRSGLEALNKMHPEVQVHLASIDELAPNGQDLIPGIGDAGDRLY 597
            VL HKL  +R +   +  FR L RE+TFYLGYEAT  L TT   +KT   +   A+ +  +VAVVPILR    GLGM E +L+LLP++ V+H+GMYRN  S +PVQYYN+LPK    DVA++L+P+IA++ TI A V+I+K WG   IKV++ VAS+ GL+ L   HPEV+V +A+IDE       + PG+GDAGDR +
Sbjct:   27 VLLHKLTKLRDERTDSTVFRHLLREVTFYLGYEATYDLQTTPKAIKTPVGEHSGAE-LTTSVAVVPILR---AGLGMVEPMLDLLPNAAVHHIGMYRNKHSLLPVQYYNKLPKQCDLDVAIVLEPVIATAGTIVATVAILKTWGVTKIKVISAVASKPGLQDLLSKHPEVEVIVAAIDEALTEEGYIFPGLGDAGDRQF 221          
BLAST of mRNA_E-fasciculatus_F_contig1380.2805.1 vs. uniprot
Match: B8CAC1_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAC1_THAPS)

HSP 1 Score: 183 bits (464), Expect = 1.960e-51
Identity = 103/211 (48.82%), Postives = 141/211 (66.82%), Query Frame = 1
Query:    1 VLQHKLALIRRQEGTAKDFRTLFREITFYLGYEATATLTTTSICVKTDRTD-----QCPAKTIAETVAVVPILRQASGGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALILDPIIASSRTINAVVSIVKKWGAKTIKVVTLVASRSGLEALNKMHPEVQVHLASIDELAPNGQDLIPGIGDAGDRLYLGTNSLE 618
            VL HKL+++R    +   FR+  REITF+LGYEAT+TLTT  + +    TD     +     +A+ VA++PILR    GLGM +++LEL+  + V+H+GMYR+  S +PVQYYNRLPK    DVA +LDP+IA+S TI +V  I+KKWG   I VV+++AS+ GL  L K HP+V V L  IDE      D++PG+GDAGDRL+ GT  +E
Sbjct:   49 VLAHKLSILRSSSTSPSSFRSTLREITFHLGYEATSTLTTRDVPLTVPGTDHKTHIEATGTKLAQKVALIPILRS---GLGMVDSMLELISSAEVHHIGMYRSK-SLMPVQYYNRLPKKCDVDVAYVLDPLIATSATIISVAGILKKWGVSEIHVVSVIASKQGLSELMKFHPDVHVTLGHIDEELNADGDVMPGLGDAGDRLF-GTPLIE 254          
BLAST of mRNA_E-fasciculatus_F_contig1380.2805.1 vs. uniprot
Match: A0A3M6VGI5_9STRA (Uracil phosphoribosyltransferase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VGI5_9STRA)

HSP 1 Score: 181 bits (459), Expect = 3.750e-51
Identity = 100/221 (45.25%), Postives = 149/221 (67.42%), Query Frame = 1
Query:    1 VLQHKLALIRRQEGTAKDFRTLFREITFYLGYEATATLTTTSICVKTDRTDQCPAKTIAETVAVVPILRQASGGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALILDPIIASSRTINAVVSIVKKWGAKTIKVVTLVASRSGLEALNKMHPEVQVHLASIDELAPNGQDLIPGIGDAGDRLYLGTNSLETAPPPDVEVPTKKSK 663
            VL+HKL  +R +   ++ FR L RE+TFYLGY+AT  L T    +KT + D   A+ ++ +V +VPILR    GLGM E +L++LPD+ V+H+GMYRN  S +PVQYYN+LPK    DVA+IL+P+IA++ TI A ++++K WG + IK+V+ +AS+ GL+ +   +P+V++ LA+IDE       ++PG+GDAGDR +     +E      VE+ TKK K
Sbjct:   27 VLRHKLTKLRDERTDSRIFRHLLREVTFYLGYDATDDLETIPKKIKTPKGDHEGAQ-LSTSVVLVPILR---AGLGMVEPMLDVLPDATVHHIGMYRNKQSLVPVQYYNKLPKECNVDVAIILEPVIATAGTIIATLAVLKTWGVEKIKIVSTIASKQGLQEVCAKNPDVEIFLAAIDEGLSEDGYILPGLGDAGDREFQTGTQVEK-----VEILTKKQK 238          
BLAST of mRNA_E-fasciculatus_F_contig1380.2805.1 vs. uniprot
Match: A0A3R7K1K3_9STRA (Uracil phosphoribosyltransferase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K1K3_9STRA)

HSP 1 Score: 181 bits (458), Expect = 4.960e-51
Identity = 96/206 (46.60%), Postives = 143/206 (69.42%), Query Frame = 1
Query:    1 VLQHKLALIRRQEGTAKDFRTLFREITFYLGYEATATLTTTSICVKTDRTDQCPAKTIAETVAVVPILRQASGGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALILDPIIASSRTINAVVSIVKKWGAKTIKVVTLVASRSGLEALNKMHPEVQVHLASIDELAPNGQDLIPGIGDAGDRLYLGTNSLE 618
            VL+HKL  +R +   ++ FR L RE+TFYLGY+AT  L+T    +KT   D   A+ ++ +VA+VPILR    GLGM E +L+LLP + V+H+GMYRN  S +PVQYYN+LPK    +VA+IL+P+IA++ TI A ++++K WG + IK+VT +AS+ GL+ +   HP+V+++LA+ID+       ++PG+GDAGDR +     LE
Sbjct:   27 VLRHKLTKLRDERTDSRVFRNLLREVTFYLGYDATDDLSTVPKKIKTPVGDHQGAE-LSTSVALVPILR---AGLGMVEPMLDLLPKATVHHIGMYRNKQSLLPVQYYNKLPKECNVEVAIILEPVIATAGTILATLAVLKTWGVEKIKIVTAIASKPGLKEVCASHPDVEIYLAAIDDELTEEGYILPGLGDAGDREFFTGKELE 228          
BLAST of mRNA_E-fasciculatus_F_contig1380.2805.1 vs. uniprot
Match: A0A7S2S8E3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8E3_9STRA)

HSP 1 Score: 180 bits (457), Expect = 1.160e-50
Identity = 100/207 (48.31%), Postives = 140/207 (67.63%), Query Frame = 1
Query:    1 VLQHKLALIRRQEGTAKDFRTLFREITFYLGYEATATLTTTSICVKTDRTDQCPAKTIAETVAVVPILRQASGGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALILDPIIASSRTINAVVSIVKKWGAKTIKVVTLVASRSGLEALNKMHPEVQVHLASI-DELAPNGQDLIPGIGDAGDRLYLGTNSLE 618
            VLQHKLAL+R  +   ++FR L REIT+Y+GYEAT  LT   I V++          +++ +A+VP++R    GLGM + +LELLP++ V+H+GMYR  GS+IPVQYYNRLP+   +DV+ +LDP+IAS RT+ A V  +KKWG   I VV+ VA+  GL+ L    P+  VH+A+  D L P G+ +IPG+GDAGDR + G +  E
Sbjct:   14 VLQHKLALMRNVDQPPREFRRLLREITYYVGYEATTNLTVEQIDVQSPL-GAGKGGHLSDKIAIVPVMR---AGLGMVDGMLELLPNAAVHHIGMYRMQGSDIPVQYYNRLPRDAVADVSFVLDPLIASGRTLCATVGTLKKWGCPKIVVVSCVATEQGLKNLFDEFPDTIVHVAATGDTLTPEGK-VIPGLGDAGDRQFNGPDEEE 215          
BLAST of mRNA_E-fasciculatus_F_contig1380.2805.1 vs. uniprot
Match: A0A024UPY9_9STRA (Uracil phosphoribosyltransferase n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024UPY9_9STRA)

HSP 1 Score: 179 bits (454), Expect = 2.260e-50
Identity = 98/199 (49.25%), Postives = 137/199 (68.84%), Query Frame = 1
Query:    1 VLQHKLALIRRQEGTAKDFRTLFREITFYLGYEATATLTTTSICVKTDRTDQCPAKTIAETVAVVPILRQASGGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALILDPIIASSRTINAVVSIVKKWGAKTIKVVTLVASRSGLEALNKMHPEVQVHLASIDELAPNGQDLIPGIGDAGDRLY 597
            VL HKL  +R  +  A  FR L REITFYLGYEAT+ L+T    +KT       ++ +A TVA+VPILR    GLGM EA+L+LLP++ V+H+GMYRN  S +PVQYYN+LPK    D A++L+P+I ++ TI A V+I+K WG   IK+++ +AS+ GL+ L   HPEV+V +A+ID+       ++PG+GDAGDR +
Sbjct:   27 VLAHKLTKLRDAKTDANLFRHLLREITFYLGYEATSDLSTVPKQIKTPLGPHQGSE-LATTVALVPILR---AGLGMVEAMLDLLPNARVHHIGMYRNSNSLLPVQYYNKLPKECHIDCAIVLEPVINTAGTIIATVAILKVWGVSQIKIISTIASKDGLKDLYSKHPEVEVIVAAIDDTLSESGVIVPGLGDAGDRQF 221          
BLAST of mRNA_E-fasciculatus_F_contig1380.2805.1 vs. uniprot
Match: A0A7S2MFT6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MFT6_9STRA)

HSP 1 Score: 179 bits (454), Expect = 2.390e-50
Identity = 96/209 (45.93%), Postives = 144/209 (68.90%), Query Frame = 1
Query:    1 VLQHKLALIRRQEGTAKDFRTLFREITFYLGYEATATLTTTSICVKTDRTD---QCPAKTIAETVAVVPILRQASGGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALILDPIIASSRTINAVVSIVKKWGAKTIKVVTLVASRSGLEALNKMHPEVQVHLASIDELAPNGQDLIPGIGDAGDRLYLGTNSLE 618
            VL  K++++R    T   FR++ R+ITF+LGYEATATLTT  I +         +C  K + E VA++PILR    GLGMT+ +LEL+P + V+H+GMYR   + +PVQYYNRLP+   SD+A ++DP+IA+++T+ +VV+++KKWG   I V++++AS+ GLE   K HP+V V +  +D+   +   +IPG+GDAGDRL+ GT  L+
Sbjct:   26 VLHDKISILRSSSTTPASFRSVLRDITFHLGYEATATLTTRPIALTVPVGHDHIECKGKKLNERVALIPILRS---GLGMTDPMLELIPKAEVHHIGMYRQ--NLMPVQYYNRLPRKCESDIAFVVDPLIATAQTLVSVVAMLKKWGVPKIHVISVIASKPGLEEFLKSHPDVLVTVGHVDDELRDDGTIIPGLGDAGDRLF-GTPMLD 228          
BLAST of mRNA_E-fasciculatus_F_contig1380.2805.1 vs. uniprot
Match: A0A7R9WS49_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WS49_9STRA)

HSP 1 Score: 178 bits (452), Expect = 1.270e-49
Identity = 96/207 (46.38%), Postives = 139/207 (67.15%), Query Frame = 1
Query:    1 VLQHKLALIRRQEGTAKDFRTLFREITFYLGYEATATLTTTSICVKT--------DRTDQCPAKTIAETVAVVPILRQASGGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALILDPIIASSRTINAVVSIVKKWGAKTIKVVTLVASRSGLEALNKMHPEVQVHLASIDELAPNGQDLIPGIGDAGDRLY 597
            VL HK++++R     +  FR++ REIT++LGYEATA LTT  I V          D  D C    + E VAVVPILR    GLGM++++LELLP + VYH+GMYR PGS  PVQY+NRLP+   SD A++LDP+IAS++T  A ++++KKWG   I +V+++ S  GL  + + HP+VQ+ + ++D +      ++PG+GDAGDRL+
Sbjct:   55 VLLHKISILRSANTPSGQFRSVLREITYHLGYEATAGLTTRPIPVSVSAGKESPNDHLD-CTGDKLIERVAVVPILRS---GLGMSDSMLELLPKASVYHIGMYRIPGS-APVQYFNRLPRKCASDAAIVLDPVIASAQTSLAAIAMLKKWGVPKIHLVSVLGSSEGLATIEEQHPDVQITVGTVDSILTKDGIVLPGLGDAGDRLF 256          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1380.2805.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRY1_ECTSI7.190e-14597.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YL27_9STRA6.530e-8162.14Uracil phosphoribosyltransferase-domain-containing... [more]
A0A8K1CH49_PYTOL1.730e-5150.75Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
B8CAC1_THAPS1.960e-5148.82Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A3M6VGI5_9STRA3.750e-5145.25Uracil phosphoribosyltransferase n=2 Tax=Peronospo... [more]
A0A3R7K1K3_9STRA4.960e-5146.60Uracil phosphoribosyltransferase n=3 Tax=Phytophth... [more]
A0A7S2S8E3_9STRA1.160e-5048.31Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A024UPY9_9STRA2.260e-5049.25Uracil phosphoribosyltransferase n=4 Tax=Aphanomyc... [more]
A0A7S2MFT6_9STRA2.390e-5045.93Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7R9WS49_9STRA1.270e-4946.38Hypothetical protein n=1 Tax=Craspedostauros austr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1380contigE-fasciculatus_F_contig1380:15482..17873 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score289.7
Seed ortholog evalue8e-76
Seed eggNOG ortholog2880.D7FRY1
KEGG rclassRC00063
KEGG koko:K00761
KEGG ReactionR00966
KEGG Pathwayko00240,ko01100,map00240,map01100
EggNOG free text desc.UMP salvage
EggNOG OGsCOG0572@1,KOG4203@2759
EC2.4.2.9
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionUracil phosphoribosyltransferase
Ec32 orthologEc-03_003570.1
Exons6
Model size1243
Cds size447
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1380.2805.1prot_E-fasciculatus_F_contig1380.2805.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1380 16050..17064 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927875.0079896-UTR-E-fasciculatus_F_contig1380:15481..160491622927875.0079896-UTR-E-fasciculatus_F_contig1380:15481..16049Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1380 15482..16049 -
1695995732.7821262-UTR-E-fasciculatus_F_contig1380:15481..160491695995732.7821262-UTR-E-fasciculatus_F_contig1380:15481..16049Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1380 15482..16049 -
1622927875.0923204-UTR-E-fasciculatus_F_contig1380:17064..170771622927875.0923204-UTR-E-fasciculatus_F_contig1380:17064..17077Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1380 17065..17077 -
1695995732.8408031-UTR-E-fasciculatus_F_contig1380:17064..170771695995732.8408031-UTR-E-fasciculatus_F_contig1380:17064..17077Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1380 17065..17077 -
1622927875.1088922-UTR-E-fasciculatus_F_contig1380:17397..175201622927875.1088922-UTR-E-fasciculatus_F_contig1380:17397..17520Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1380 17398..17520 -
1695995732.8526177-UTR-E-fasciculatus_F_contig1380:17397..175201695995732.8526177-UTR-E-fasciculatus_F_contig1380:17397..17520Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1380 17398..17520 -
1622927875.1214292-UTR-E-fasciculatus_F_contig1380:17781..178731622927875.1214292-UTR-E-fasciculatus_F_contig1380:17781..17873Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1380 17782..17873 -
1695995732.8706975-UTR-E-fasciculatus_F_contig1380:17781..178731695995732.8706975-UTR-E-fasciculatus_F_contig1380:17781..17873Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1380 17782..17873 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927875.0257492-CDS-E-fasciculatus_F_contig1380:16049..161781622927875.0257492-CDS-E-fasciculatus_F_contig1380:16049..16178Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1380 16050..16178 -
1695995732.793698-CDS-E-fasciculatus_F_contig1380:16049..161781695995732.793698-CDS-E-fasciculatus_F_contig1380:16049..16178Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1380 16050..16178 -
1622927875.0486872-CDS-E-fasciculatus_F_contig1380:16345..164441622927875.0486872-CDS-E-fasciculatus_F_contig1380:16345..16444Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1380 16346..16444 -
1695995732.8027751-CDS-E-fasciculatus_F_contig1380:16345..164441695995732.8027751-CDS-E-fasciculatus_F_contig1380:16345..16444Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1380 16346..16444 -
1622927875.0639417-CDS-E-fasciculatus_F_contig1380:16631..166901622927875.0639417-CDS-E-fasciculatus_F_contig1380:16631..16690Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1380 16632..16690 -
1695995732.8122764-CDS-E-fasciculatus_F_contig1380:16631..166901695995732.8122764-CDS-E-fasciculatus_F_contig1380:16631..16690Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1380 16632..16690 -
1622927875.076406-CDS-E-fasciculatus_F_contig1380:16904..170641622927875.076406-CDS-E-fasciculatus_F_contig1380:16904..17064Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1380 16905..17064 -
1695995732.8229153-CDS-E-fasciculatus_F_contig1380:16904..170641695995732.8229153-CDS-E-fasciculatus_F_contig1380:16904..17064Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1380 16905..17064 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1380.2805.1

>prot_E-fasciculatus_F_contig1380.2805.1 ID=prot_E-fasciculatus_F_contig1380.2805.1|Name=mRNA_E-fasciculatus_F_contig1380.2805.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=149bp
MTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALILDPI
IASSRTINAVVSIVKKWGAKTIKVVTLVASRSGLEALNKMHPEVQVHLAS
IDELAPNGQDLIPGIGDAGDRLYLGTNSLETAPPPDVEVPTKKSKQST*
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mRNA from alignment at E-fasciculatus_F_contig1380:15482..17873-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1380.2805.1 ID=mRNA_E-fasciculatus_F_contig1380.2805.1|Name=mRNA_E-fasciculatus_F_contig1380.2805.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2392bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1380:15482..17873- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTTCTCCAACACAAATTGGCTCTGATTCGGCGCCAAGAAGGAACCGCCAA GGACTTCAGGACTCTGTTTCGCGAGATCACCTTTTACTTAGGGTGAGCAG GGTTTTGTTTCCGTGCTTTTCTGACATTTTCGAGTGTTCTCAGGGCTGAG TTCTGGCTCCAGTACGTATAAACTAAACTGCATTCATTCACTATGATTCC CCGCCAATGCGTATTTTGCAACACCCCGGGATACCACACCCAAACATCAC AGGAAAGAATTTGGGGCCCGCTGATTACTCAAGTCGTGTTGCAACGATCA TCCTAGCGTATACATGATCATGATCTCTCCCCTTTTTCGTCGTCCATGTG CAGCTACGAAGCCACTGCGACCCTGACGACGACGTCGATTTGCGTGAAAA CAGACCGCACGGACCAATGCCCCGCGAAGACGATCGCCGAGACGGTCGCC GTGGTGCCCATTCTAAGGCAAGCCTCGTAATGATTCCTCCATGCTTGTCC TCTTGAATTATGAAACAATGCGCTTGAGCGCACGAACGTACATCAGACTG GTAAGTACCGCTGTGATGTTTATGTTCGGTGTGTGCTGGCGCTTCGCGCG CTCAAGGGCGTTGCTGTATGCTCTCTGTGCAGTTTTCATCCTCTGCAACA ATGTATTCTTCGTATGCATACTGTTCTCGAAGGCTTGCATCAACACCATG TGGGTGGGGCGTTCTCGTAAACCGCGCCTGGCACGCCGTCAACCGCATTG GTTTTGATTTCTCTCCTGCTTTGATCTGCCCCGCAAATTTATTCAGGGGA GGATTGGGGATGACAGAAGCTCTTCTTGAGCTCTTGCCAGATTCCCCCGT CTACCATGTTGGCATGTACCGTAATCCGGGGAGCAACATTCCTGTACAAT ACTACAATAGGCTACCGAAAGGACATCCCTCCGACGTCGCGCTGATTCTG GACCCTATCATCGCCTCATGTGAGTTGCCCCTAAACACCAAGAACTTGTA TGTGGTCGAGTGTCGCAACAACAAGTGCTTGTGAGCAACCCGCAGCCTTC GCGCGATGTCATGGTTCGAGAACGCCTGTTTCTTCTTATCGTTTCGATCT CTCTCCATGTCGTCGATTCACATGTAAACCGCGGTACACTGCTTGTTCCT TCTTGCGTCCCACCATCTCCCACGAACGTACAGCTCGCACCATCAATGCC GTGGTGTCCATCGTCAAGAAGTGGGGAGCCAAGACGATCAAGGTGGGTGC CACTTGCCCATACGTACTGTTTGCCATCGGTGATGGGTTTGCTCGAGGTG CTCCTACAGAGTACACTCGGGTGTTGTAACTTTGACTGCCACCGCTGTGT CGTCTGGTGAAGAGGACTCTTTTGTGGGTTCAACGCCAGGTTGAATACCT CCCCAATTTCTTCACTTGCCGTGCACTAGGTGGTGACCTTGGTTGCATCA CGGAGCGGGTTGGAGGCTCTGAACAAAATGCACCCGGAAGTACAGGTTCA CCTCGCCTCCATCGACGAGCTCGCACCGGTAAGAGAATCAAGGCCCCTTA CCACAACCTGTGTTAACGTACACTTTGCCTTATTATATGCTGCTACACCA TGGCTGTGTTCTCATAACTGTTGGTACACGTGCATGGAAAGTACAAACGA TTGTGCAATTACGCCGTCCCATGTATATGTGGATTGCGCCTACAGAACGG TCAGGATCTAATCCCTGGGATCGGCGATGCTGGAGACCGCCTATACCTCG GCACAAACTCCCTGGAAACTGCTCCTCCGCCAGATGTGGAGGTCCCAACG AAGAAATCCAAGCAGTCGACGTAGTCTTCTTTCGCCTTGAGTAAGCTAAT TTCGGTTGTGTTTTCTTCGAGGGACGCTAGAGTTCTTGCCGACGTTGTAG CTTCGATGACCCGTTGGTATCTGATGCTGTGTATCGCTGTTGTAGAAGAA TGTCTATCAGCACGCGCCTTAACTGGTAAGGTACGAACACGAGTAGTGCT CATGGTCAGTGGTGATTGGCCCCGGGTGCACGGTTCTACACAGCAATAGC GGAGTTGTAGTACTGGCTTCCTCAGCGCCTGGCTGCGACGGGTAGGCGGT CCTGTTGCAGCGTACCAACGAGTGAGAAGCAAGGAGCTCTCTGTTCTAGG CCAACACTGACGAATCGGGTGCAAAATGGAAACTCTCATGCTGCTCCCGT GACGACATGGTAAAATTGTCGTGCCTCGTGGCGGCGGGCATAGCGCTTTT CACACCACCCAACCTTGACATCCAATTCGAGATTAATAAGAGGAAAGAGC ACAGTCCAGCCTGACGACATATTGTCAAAGCTCTAACGAACTCTTTGCGG GAAGACTCCTCCACTTGACGATGAGCATATGCTTCAATATTG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1380:15482..17873-

>mRNA_E-fasciculatus_F_contig1380.2805.1 ID=mRNA_E-fasciculatus_F_contig1380.2805.1|Name=mRNA_E-fasciculatus_F_contig1380.2805.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=894bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1380:15482..17873- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGACAGAAGCTCTTCTTGAGCTCTTGCCAGATTCCCCCGTCTACCATGT
TGGCATGTACCGTAATCCGGGGAGCAACATTCCTGTACAATACTACAATA
GGCTACCGAAAGGACATCCCTCCGACGTCGCGCTGATTCTGGACCCTATC
ATCGCCTCATATGACAGAAGCTCTTCTTGAGCTCTTGCCAGATTCCCCCG
TCTACCATGTTGGCATGTACCGTAATCCGGGGAGCAACATTCCTGTACAA
TACTACAATAGGCTACCGAAAGGACATCCCTCCGACGTCGCGCTGATTCT
GGACCCTATCATCGCCTCATCTCGCACCATCAATGCCGTGGTGTCCATCG
TCAAGAAGTGGGGAGCCAAGACGATCAAGCTCGCACCATCAATGCCGTGG
TGTCCATCGTCAAGAAGTGGGGAGCCAAGACGATCAAGGTGGTGACCTTG
GTTGCATCACGGAGCGGGTTGGAGGCTCTGAACAAAATGCACCCGGAAGT
ACAGGTTCACCTCGCCTCCATCGACGAGCTCGCACCGGTGGTGACCTTGG
TTGCATCACGGAGCGGGTTGGAGGCTCTGAACAAAATGCACCCGGAAGTA
CAGGTTCACCTCGCCTCCATCGACGAGCTCGCACCGAACGGTCAGGATCT
AATCCCTGGGATCGGCGATGCTGGAGACCGCCTATACCTCGGCACAAACT
CCCTGGAAACTGCTCCTCCGCCAGATGTGGAGGTCCCAACGAAGAAATCC
AAGCAGTCGACGTAGAACGGTCAGGATCTAATCCCTGGGATCGGCGATGC
TGGAGACCGCCTATACCTCGGCACAAACTCCCTGGAAACTGCTCCTCCGC
CAGATGTGGAGGTCCCAACGAAGAAATCCAAGCAGTCGACGTAG
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