prot_E-fasciculatus_F_contig1380.2804.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1380.2804.1
Unique Nameprot_E-fasciculatus_F_contig1380.2804.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length264
Homology
BLAST of mRNA_E-fasciculatus_F_contig1380.2804.1 vs. uniprot
Match: A0A6H5KYE3_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYE3_9PHAE)

HSP 1 Score: 459 bits (1182), Expect = 1.780e-162
Identity = 242/263 (92.02%), Postives = 249/263 (94.68%), Query Frame = 0
Query:    1 MKAPALLLCVLPAASGFIPSPVVVSRTSLPDRRQRATIAQVAAVAIDAPRTLPKGKRIVRRKKRQPSQPKHVDTTNAPVTLVKSKAEYDEILRHNSNSLVVIKFFAPWCRSCKALDVKYRRMAVENDDVKFVEIDVHQSPDLKKVLGVRAVPTVKLHAGSLGQVASFTCGPRKAPELARKIQLCKDVPALTARLGKGSGMIEMLADELSSDKPVAASSLQQPGREVRSADNVGAKGLMEKVASEELAESSQRTLDGFPTEDGL 263
            MKAP LLLCVLPAASGFIPS VVVSRTSLPDRRQR TIAQ+A VAID PRTLPKGKRIVRRKKRQPSQPKHVDT NAPVTL+KSKAEYDEILRHN NSLVVIKFFAPWCRSCKALDVKYRRMAVENDDVKFVEIDVHQSPDLKKVLGVRAVPTVKLHAG LGQVASFTCGPRKAPELARKIQLCKDVPALTARLGKGSGMIEMLADEL+SDKPVAASSL QPGREVRSA++V AKGLMEKVA +E+AESSQRTLD  PTED L
Sbjct:    1 MKAPTLLLCVLPAASGFIPS-VVVSRTSLPDRRQRTTIAQIATVAIDTPRTLPKGKRIVRRKKRQPSQPKHVDTANAPVTLIKSKAEYDEILRHNINSLVVIKFFAPWCRSCKALDVKYRRMAVENDDVKFVEIDVHQSPDLKKVLGVRAVPTVKLHAGPLGQVASFTCGPRKAPELARKIQLCKDVPALTARLGKGSGMIEMLADELNSDKPVAASSLPQPGREVRSAESVIAKGLMEKVAHQEMAESSQRTLDEVPTEDRL 262          
BLAST of mRNA_E-fasciculatus_F_contig1380.2804.1 vs. uniprot
Match: A0A835Z936_9STRA (Thioredoxin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z936_9STRA)

HSP 1 Score: 139 bits (351), Expect = 1.840e-37
Identity = 77/169 (45.56%), Postives = 106/169 (62.72%), Query Frame = 0
Query:   72 VDTTNAPVTLVKSKAEYDEILRHNSNSLVVIKFFAPWCRSCKALDVKYRRMAVENDDVKFVEIDVHQSPDLKKVLGVRAVPTVKLHAGSLGQVASFTCGPRKAPELARKIQLCKDVPALTARLGKGSGMIEMLADELSSDKPVAASSLQQPGREVRSADNVGAKGLMEK 240
            VD + APVT V +  EY  +L  N  SLVV K+FAPWCRSCKA+D+K++R+A+EN  V F EID+  S +LK+  GV+A+P + +HAG LG V +FTCGP K P L+R+I +  +V A  A+   G      L ++LS+     AS L  P   + +A     KGLME+
Sbjct:   12 VDLSTAPVTRVTTSQEYHALLAENPESLVVFKWFAPWCRSCKAMDLKFKRLALENPCVVFAEIDIDVSRELKRQHGVKAIPAIHMHAGHLGLVENFTCGPSKVPLLSRRIDMYANVAAYVAKAKGG------LMEKLSAFSAGVASKLPIPSAPIGTAS----KGLMER 170          
BLAST of mRNA_E-fasciculatus_F_contig1380.2804.1 vs. uniprot
Match: A0A836CK13_9STRA (Thioredoxin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK13_9STRA)

HSP 1 Score: 115 bits (288), Expect = 2.090e-27
Identity = 55/118 (46.61%), Postives = 78/118 (66.10%), Query Frame = 0
Query:   75 TNAPVTLVKSKAEYDEILRHNSNSLVVIKFFAPWCRSCKALDVKYRRMAVENDDVKFVEIDVHQSPDLKKVLGVRAVPTVKLHAGSLGQVASFTCGPRKAPELARKIQLCKDVPALTA 192
            + APV  V S  EY ++L  N + LVV K+ AP+CR+CKA+D+K+RR+A+E  DV F +I+V ++ DLK+  GV  +P + +HAG LGQV +F CGP  AP L  ++    DV A  A
Sbjct:   75 STAPVQHVASSQEYHQLLALNPDKLVVFKWHAPYCRACKAMDLKFRRLALERRDVVFADINVARAVDLKRAHGVAVIPAIHMHAGHLGQVEAFACGPSSAPLLRARVDRYADVSAYVA 192          
BLAST of mRNA_E-fasciculatus_F_contig1380.2804.1 vs. uniprot
Match: A0A2V3IJC0_9FLOR (Thioredoxin-like 2-1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJC0_9FLOR)

HSP 1 Score: 100 bits (250), Expect = 1.280e-22
Identity = 49/111 (44.14%), Postives = 72/111 (64.86%), Query Frame = 0
Query:   74 TTNAPVTLVKSKAEYDEILRHNSNSLVVIKFFAPWCRSCKALDVKYRRMAVENDDVKFVEIDVHQSPDLKKVLGVRAVPTVKLHAGSLGQVASFTCGPRKAPELARKIQLC 184
            TT  PV L+    +Y ++LR +S+SLVV+K FAPWCRSC+AL  K  R A E  +V+F ++D  Q+ +L   LGV ++PT   + G  G++  F+CGP++A  L  KI+ C
Sbjct:   58 TTLEPVQLIHGVEQYLQVLRESSDSLVVLKVFAPWCRSCRALTPKVNRFAREFSNVRFFKMDYEQNKELCHRLGVASMPTFVFYWGVAGEIEKFSCGPQRAYILREKIEQC 168          
BLAST of mRNA_E-fasciculatus_F_contig1380.2804.1 vs. uniprot
Match: A0A7S1TN71_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TN71_9RHOD)

HSP 1 Score: 91.3 bits (225), Expect = 8.830e-19
Identity = 43/108 (39.81%), Postives = 66/108 (61.11%), Query Frame = 0
Query:   74 TTNAPVTLVKSKAEYDEILRHNSNSLVVIKFFAPWCRSCKALDVKYRRMAVENDDVKFVEIDVHQSPDLKKVLGVRAVPTVKLHAGSLGQVASFTCGPRKAPELARKI 181
            T   PV  +    +Y   L  +S  LVVIKF+APWCRSCKA++ K +R+A E  ++ F E+D  ++ +L + +GV+++P    + GS G+V  FT GP +A  L  K+
Sbjct:   77 TRMEPVVRLSGFGDYLAALECSSERLVVIKFYAPWCRSCKAMEPKVKRLAREYPEILFCEVDFQENHELCRRIGVKSIPAFHFYDGSAGRVEDFTAGPARAKMLIEKV 184          
BLAST of mRNA_E-fasciculatus_F_contig1380.2804.1 vs. uniprot
Match: A0A7S3YAB7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAB7_HETAK)

HSP 1 Score: 91.3 bits (225), Expect = 2.490e-18
Identity = 48/112 (42.86%), Postives = 67/112 (59.82%), Query Frame = 0
Query:   87 EYDEILRHNSNSLVVIKFFAPWCRSCKALDVKYRRMA---VENDDVKFVEIDVH--QSPDLKKVLGVRAVPTVKLHAGSLGQVASFTCGPRKAPELARKIQLCKDVPALTAR 193
            EY ++L  + N LVV+KF+APWCRSCKALDVK+R+ A       DV+F E DV   Q+  +KK+L +  +P V ++ GS G+V  F CGP K      +++   D     AR
Sbjct:   98 EYLDVLTQSKNQLVVMKFYAPWCRSCKALDVKFRKWARGEYAARDVRFFECDVFDPQNAAIKKMLEIDNIPLVHMYQGSQGKVEDFKCGPSKFEYFVERLEARLDPAGAAAR 209          
BLAST of mRNA_E-fasciculatus_F_contig1380.2804.1 vs. uniprot
Match: A0A1X6NXU9_PORUM (Thioredoxin domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NXU9_PORUM)

HSP 1 Score: 85.5 bits (210), Expect = 3.030e-16
Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 0
Query:   66 PSQPKHVDTTNAPVTLVKSKAEYDEILRHNSNSLVVIKFFAPWCRSCKALDVKYRRMAVENDDVKFVEIDVHQSPDLKKVLGVRAVPTVKLHAGSLGQVASFTCGPRKAPELARKI 181
            P++   V    AP+T   S  EY E+L+ +S  + V+KF+APWCRSC+A+  K  R+A E  +++F EID   + +L   LGV+ +PT   ++G+ G+V  F  GP +A  +  K+
Sbjct:   77 PARAMDVAEVVAPIT---SFDEYMEMLQASSGGVAVLKFYAPWCRSCRAIAPKVARLAHEFPEIRFYEIDYEANKELCWRLGVKNLPTFHFYSGAAGRVEDFNAGPARAHVIREKV 189          
BLAST of mRNA_E-fasciculatus_F_contig1380.2804.1 vs. uniprot
Match: A0A7S3ATR9_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ATR9_9EUKA)

HSP 1 Score: 82.0 bits (201), Expect = 2.100e-15
Identity = 45/111 (40.54%), Postives = 66/111 (59.46%), Query Frame = 0
Query:   72 VDTTNAPVTLVKSKAEYDEILRHNSNSLVVIKFFAPWCRSCKALDVKYRRMAVENDDVKFVEIDVHQSPDLKKVLGVRAVPTVKLHAGSLGQVASFTCGPRKAPELARKIQ 182
            +D T+A   L+      +E  R N   +VVIKFFA WCR+CKA+  K+ R+A +  DV+F EI    +  L K LG++ +P +++  GS G+V  FTCGP K   L  K++
Sbjct:   58 IDDTDAYEALI------EEATRENR--VVVIKFFASWCRACKAMSPKFTRIADDWPDVEFHEIMFDNNKKLCKSLGIKILPYIEIIGGSGGKVEGFTCGPSKISRLQEKLE 160          
BLAST of mRNA_E-fasciculatus_F_contig1380.2804.1 vs. uniprot
Match: A0A7S3VCG8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VCG8_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 5.940e-15
Identity = 38/104 (36.54%), Postives = 65/104 (62.50%), Query Frame = 0
Query:   82 VKSKAEYDEILRHNSNSLVVIKFFAPWCRSCKALDVKYRRMAVENDDVK----FVEIDVHQSPDLKKVLGVRAVPTVKLHAGSLGQVASFTCGPRKAPELARKI 181
            ++SK E+  +L  N + ++++KF+APWCR+CK L+ K+ +++ +    K    F ++ V  + +  K LGV A+P+V ++ G  G + SF CGP K P L +KI
Sbjct:  119 LESKEEHQALLEQNQDKIILLKFYAPWCRACKGLEPKFIQISKDKKYAKLPLVFAQLSVANAKEYVKALGVLALPSVHIYGGEEGLLESFPCGPSKVPILKKKI 222          
BLAST of mRNA_E-fasciculatus_F_contig1380.2804.1 vs. uniprot
Match: A0A7S3WN14_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WN14_EMIHU)

HSP 1 Score: 80.9 bits (198), Expect = 9.020e-15
Identity = 36/97 (37.11%), Postives = 64/97 (65.98%), Query Frame = 0
Query:   95 NSNSLVVIKFFAPWCRSCKALDVKYRRMAVENDDVKFVEIDVHQSPDLKKVLGVRAVPTVKLHAGSLGQVASFTCGPRKAPELARKIQL---CKDVP 188
            + + +V IKF+A WCR+CKA+  KY+R+A +  +++F E+    +  L K LG++ +P +++ AGS G+V  F+CGP K   L  K+++   C+++P
Sbjct:  100 SESRVVCIKFYASWCRACKAMAPKYKRVADDWPEIEFCEVLFDTNKALCKGLGIKVLPYIEVVAGSAGKVEGFSCGPSKISSLMEKLEVHSGCEEIP 196          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1380.2804.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYE3_9PHAE1.780e-16292.02Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
A0A835Z936_9STRA1.840e-3745.56Thioredoxin domain-containing protein n=1 Tax=Trib... [more]
A0A836CK13_9STRA2.090e-2746.61Thioredoxin domain-containing protein n=1 Tax=Trib... [more]
A0A2V3IJC0_9FLOR1.280e-2244.14Thioredoxin-like 2-1, chloroplastic n=1 Tax=Gracil... [more]
A0A7S1TN71_9RHOD8.830e-1939.81Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A7S3YAB7_HETAK2.490e-1842.86Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A1X6NXU9_PORUM3.030e-1637.93Thioredoxin domain-containing protein n=1 Tax=Porp... [more]
A0A7S3ATR9_9EUKA2.100e-1540.54Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S3VCG8_9STRA5.940e-1536.54Hypothetical protein (Fragment) n=1 Tax=Chaetocero... [more]
A0A7S3WN14_EMIHU9.020e-1537.11Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 81..181
e-value: 1.3E-17
score: 63.6
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 59..186
score: 9.934
NoneNo IPR availableGENE3D3.40.30.10coord: 70..187
e-value: 2.4E-22
score: 81.0
NoneNo IPR availablePANTHERPTHR43601:SF10THIOREDOXIN-LIKE 2-2, CHLOROPLASTICcoord: 24..219
NoneNo IPR availablePANTHERPTHR43601FAMILY NOT NAMEDcoord: 24..219
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..263
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.674
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 71..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1380contigE-fasciculatus_F_contig1380:11954..15039 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1380.2804.1mRNA_E-fasciculatus_F_contig1380.2804.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1380 11908..15515 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1380.2804.1 ID=prot_E-fasciculatus_F_contig1380.2804.1|Name=mRNA_E-fasciculatus_F_contig1380.2804.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=264bp
MKAPALLLCVLPAASGFIPSPVVVSRTSLPDRRQRATIAQVAAVAIDAPR
TLPKGKRIVRRKKRQPSQPKHVDTTNAPVTLVKSKAEYDEILRHNSNSLV
VIKFFAPWCRSCKALDVKYRRMAVENDDVKFVEIDVHQSPDLKKVLGVRA
VPTVKLHAGSLGQVASFTCGPRKAPELARKIQLCKDVPALTARLGKGSGM
IEMLADELSSDKPVAASSLQQPGREVRSADNVGAKGLMEKVASEELAESS
QRTLDGFPTEDGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR013766Thioredoxin_domain