mRNA_E-fasciculatus_F_contig138.2800.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig138.2800.1 vs. uniprot
Match: D8LU23_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU23_ECTSI) HSP 1 Score: 253 bits (645), Expect = 7.490e-79 Identity = 133/214 (62.15%), Postives = 154/214 (71.96%), Query Frame = 1
Query: 4 SLAFQKAAKGDTGAVLERLGRCVEVFERYPGVSRCMVQWCHLAHTGLAALAAIDDPKARGLYNRLRDVYNPSRPPASLPAPPFEEWRGISAVCDDFQCRLTQGIIASQALGVFSTPPHCTSNCAGVRRA-----YTKEEKLTG---KGVILEEVTSTIIDAPCSTTDTPMASNRSWEMTQEPAPQISRPSRSSSSTSNVHRELGRRGASDTDII 621
+LAFQKA GDTG LER G CVEVFERYPGV RCM+ WC ++H+ L ALAAIDD +AR LYNRLRDVYNPSRP + LPAPP EEWRG SA CDDFQCRL GIIASQA VFS+PP CTSN AG++ EE+ G GVI +EVT +++ PCS P+AS SW + QEPAPQ + P+ SS STS++HRELGR GAS T I
Sbjct: 207 NLAFQKATNGDTGGALERFGHCVEVFERYPGVCRCMILWCRMSHSLLGALAAIDDSRARELYNRLRDVYNPSRPASFLPAPPLEEWRGTSAFCDDFQCRLFDGIIASQAFSVFSSPPDCTSNYAGLQHEEDDVPVVDEERDGGIAWAGVIPKEVTGSVMVTPCSNGVKPVASPSSWALNQEPAPQTNPPAGSSPSTSHLHRELGRGGASGTAIF 420
BLAST of mRNA_E-fasciculatus_F_contig138.2800.1 vs. uniprot
Match: D8LU28_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU28_ECTSI) HSP 1 Score: 241 bits (615), Expect = 1.250e-73 Identity = 127/216 (58.80%), Postives = 150/216 (69.44%), Query Frame = 1
Query: 4 SLAFQKAAKGDTGAVLERLGRCVEVFERYPGVSRCMVQWCHLAHTGLAALAAIDDPKARGLYNRLRDVYNPSRPPASLPAPPFEEWRGISAVCDDFQCRLTQGIIASQALGVFSTPPHCTSNCAGVRRA-------YTKEEK---LTGKGVILEEVTSTIIDAPCSTTDTPMASNRSWEMTQEPAPQISRPSRSSSSTSNVHRELGRRGASDTDII 621
+LA+QKAA GD G LER G+CV+VFERYPGV RCM WCH+AH L +LAAIDD +A GLYNRLRDVYNPSRP +SLPAPP EEWRGISA CDDFQCRLT+G+IASQA VFS P HCTSNC G + + EE+ + G E T +I+DAP + D PMASN SWE+ EP PQ S S S S++H + R G SDTD++
Sbjct: 281 TLAYQKAANGDAGGALERFGQCVDVFERYPGVCRCMF-WCHIAHGILGSLAAIDDSRAGGLYNRLRDVYNPSRPSSSLPAPPLEEWRGISAFCDDFQCRLTEGMIASQAFSVFSAPTHCTSNCTGSQNECEEASLQFVDEEQNSSMVSVGATPEVATGSIMDAPRTNGDKPMASNYSWELNLEPTPQTSPTVGPSLSPSHLHCKPVRGGESDTDVL 495
BLAST of mRNA_E-fasciculatus_F_contig138.2800.1 vs. uniprot
Match: A0A6H5JBJ1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ1_9PHAE) HSP 1 Score: 243 bits (621), Expect = 2.210e-73 Identity = 126/203 (62.07%), Postives = 146/203 (71.92%), Query Frame = 1
Query: 4 SLAFQKAAKGDTGAVLERLGRCVEVFERYPGVSRCMVQWCHLAHTGLAALAAIDDPKARGLYNRLRDVYNPSRPPASLPAPPFEEWRGISAVCDDFQCRLTQGIIASQALGVFSTPPHCTSNCAGVRRAYTKEEKLTGK-----------GVILEEVTSTIIDAPCSTTDTPMASNRSWEMTQEPAPQISRPSRSSSSTSNVH 579
+LA QKA KGD G LERL CVEVFERYPGV RCM+ WCH++H+ L ALAAI+D +AR LY+RLR+VYNPSR SLPAPP EEWRG+SA CDDFQCR +GIIASQAL VFSTP C SNCAG + A KE+ L GVILE T T++DAPCS D PM+S SWE+ Q+PAPQ+S P S STS+VH
Sbjct: 413 NLALQKAGKGDAGGALERLRHCVEVFERYPGVCRCMMLWCHVSHSILGALAAINDSRARELYDRLRNVYNPSRSSDSLPAPPLEEWRGMSAFCDDFQCRCFEGIIASQALSVFSTPTLCASNCAGSQGAQCKEDYLQAADEQHHTSIVPAGVILENATGTMMDAPCSNGDKPMSSTSSWELNQKPAPQMSPPVGPSLSTSHVH 615
BLAST of mRNA_E-fasciculatus_F_contig138.2800.1 vs. uniprot
Match: D8LU21_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU21_ECTSI) HSP 1 Score: 224 bits (570), Expect = 1.410e-66 Identity = 116/219 (52.97%), Postives = 146/219 (66.67%), Query Frame = 1
Query: 4 SLAFQKAAKGDTGAVLERLGRCVEVFERYPGVSRCMVQWCHLAHTGLAALAAIDDPKARGLYNRLRDVYNPSRPPASLPAPPFEEWRGISAVCDDFQCRLTQGIIASQALGVFSTPPHCTSNCAGVRRAYTKEE-----------KLTGKGVILEEVTSTIIDAPCSTTDTPMASNRSWEMTQEPAPQISRPSRSSSSTSNVHR-ELGRRGASDTDIIS 624
+L F +AA GD ++E+LG CVEV ERYPGV RCM+QWCHL H LAALA +DD +ARGLYNRLR+ YNP RPPASLPAPP EEW+G++A CD FQCRL G+IAS+ L F+TPP C+ N A ++A+ K+E + GV EE TS+ +DA CS+ D M+S SWE E A Q S +R S+S+VHR E +RG TD+ S
Sbjct: 315 NLVFHRAANGDAVGMVEKLGHCVEVLERYPGVCRCMLQWCHLVHAALAALAVMDDSRARGLYNRLREAYNPFRPPASLPAPPLEEWQGLAAFCDHFQCRLVAGVIASERLSAFTTPPDCSRNDASFQQAHLKKEGVPVVDEEHHSDIVWAGVTPEEATSSNMDALCSSGDKSMSSTSSWEWNHERALQASPTARLGPSSSHVHRRESSKRGIHGTDLFS 533
BLAST of mRNA_E-fasciculatus_F_contig138.2800.1 vs. uniprot
Match: D8LU24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU24_ECTSI) HSP 1 Score: 222 bits (566), Expect = 8.880e-66 Identity = 122/220 (55.45%), Postives = 141/220 (64.09%), Query Frame = 1
Query: 7 LAFQKAAKGDTGAVLERLGRCVEVFERYPGVSRCMVQWCHLAHTGLAALAAIDDPKARGLYNRLRDVYNPSRPPASLPAPPFEEWRGISAVCDDFQCRLTQGIIASQALGVFSTPPHCTSNCAGVRRAYTKEEKLT-----------GKGVILEEVTSTIIDAPCSTTDTPMASNRSWEMTQEPAPQISRPSRSSSSTSNVH---RELGRRGASDTDIIS 624
LAFQKA KGD G LERLG CVE FERYPGV RCM+ WCH +H+ L ALAAI +AR LYNRLRDVYNPSRP + LPAPP EEW G S+ CDDFQCR +GIIAS+A +F P CTSN ++ E+ L GVI E+ +I+DAPCS D PMAS WE+ QEPAPQ+ P S STS+VH + G G S TDI S
Sbjct: 341 LAFQKAGKGDAGGALERLGHCVEAFERYPGVCRCMMLWCHASHSILGALAAIKSSRARELYNRLRDVYNPSRPASFLPAPPLEEWHGTSSFCDDFQCRCFEGIIASRARNLFPAPSDCTSNNTDQQQTNCTEDYLEVVDEEHDGSIISAGVIPEKAIGSIMDAPCSNGDKPMASTSLWELNQEPAPQMGPPVGPSLSTSHVHCCGPDTG--GGSGTDIYS 558
BLAST of mRNA_E-fasciculatus_F_contig138.2800.1 vs. uniprot
Match: D7FTG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTG5_ECTSI) HSP 1 Score: 209 bits (533), Expect = 3.190e-62 Identity = 114/216 (52.78%), Postives = 138/216 (63.89%), Query Frame = 1
Query: 4 SLAFQKAAKGDTGAVLERLGRCVEVFERYPGVSRCMVQWCHLAHTGLAALAAIDDPKARGLYNRLRDVYNPSRPPASLPAPPFEEWRGISAVCDDFQCRLTQGIIASQALGVFSTPPHCTSNCAGVRRA--------YTKEEKLTGKGVILEEVTSTIIDAPCSTTDTPMASNRSWEMTQEPAPQISRPSRSSSSTSNVHRELGRRGASD-TDIIS 624
+LAFQKA GD L+R G C+EVFERYPG+ R + WCHLAH L +LAAIDD +ARGLY+RLR+VYNPSR +SLPAPP EEWRGISA CD F CR+ +G+IA QAL VFST P C + AG + Y + GV E+ T +I+ A CS + PMA SWE QEPA Q+S P S NVH E + G SD TD++S
Sbjct: 196 TLAFQKAVNGDAAGALKRFGHCIEVFERYPGLCRYRILWCHLAHGILGSLAAIDDSRARGLYSRLREVYNPSRLSSSLPAPPLEEWRGISAFCDHFLCRIFEGVIARQALSVFSTQPLCARSGAGSQGTEDNLQTVEYEHRSSIGSAGVTPEDATGSIMVASCSNANKPMACTSSWESHQEPASQMSLPVGPSVFPLNVHSEPVKGGTSDDTDVLS 411
BLAST of mRNA_E-fasciculatus_F_contig138.2800.1 vs. uniprot
Match: A0A6H5K8E7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8E7_9PHAE) HSP 1 Score: 212 bits (540), Expect = 1.850e-61 Identity = 115/219 (52.51%), Postives = 142/219 (64.84%), Query Frame = 1
Query: 4 SLAFQKAAKGDTGAVLERLGRCVEVFERYPGVSRCMVQWCHLAHTGLAALAAIDDPKARGLYNRLRDVYNPSRPPASLPAPPFEEWRGISAVCDDFQCRLTQGIIASQALGVFSTPPHCTSNCAGVRRAYTKEEK-----------LTGKGVILEEVTSTIIDAPCSTTDTPMASNRSWEMTQEPAPQISRPSRSSSSTSNVHR-ELGRRGASDTDIIS 624
+L F +AA GD +LE++G CVEV ERYPGV R M+ WCHL H LAALAA+DD +ARGLYNRLR+ YN RP ASLPAPP E W+G+SA CD F C L G+IAS+ L VF+TPP+ + N AG ++ + K E + GV EE TS+I+D CS D PMAS SWE E A Q+S P+RS S+SNVHR E + G TD+ S
Sbjct: 412 NLVFHRAANGDAVGMLEKIGHCVEVLERYPGVCRFMLGWCHLVHAALAALAAMDDCRARGLYNRLREAYNQFRPSASLPAPPLEAWQGLSAFCDHFHCMLFGGVIASERLSVFTTPPYSSRNGAGFQQDHLKGEDVPVVDEEHHIGIVWGGVTPEEATSSIMDVLCSNGDKPMASTSSWEWNHERALQMSPPARSRPSSSNVHRRESSKDGIQFTDLFS 630
BLAST of mRNA_E-fasciculatus_F_contig138.2800.1 vs. uniprot
Match: D8LU25_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU25_ECTSI) HSP 1 Score: 206 bits (523), Expect = 1.720e-59 Identity = 113/218 (51.83%), Postives = 135/218 (61.93%), Query Frame = 1
Query: 4 SLAFQKAAKGDTGAVLERLGRCVEVFERYPGVSRCMVQWCHLAHTGLAALAAIDDPKARGLYNRLRDVYNPSRPPASLPAPPFEEWRGISAVCDDFQCRLTQGIIASQALGVFSTPPHCTSNCAGVRRAYTKEEKL-----------TGKGVILEEVTSTIIDAPCSTTDTPMASNRSWEMTQEPAPQISRPSRSSSSTSNVHRELGRRGASDTDIIS 624
+LAF KA GDTG ERL CVEVFERYPGV RCM+ WCH++H+ LAALAAI +AR LYNRL RP + LPAPP +EWRG SA CDDFQCR +GIIASQA +F P +C+SN +++ + E+ L GVI E +I+ APCS D PMAS SWE+ QEPA +S P S STS+VH E R AS D S
Sbjct: 340 ALAFLKATNGDTGGAFERLEHCVEVFERYPGVCRCMMLWCHVSHSILAALAAIKSSRARELYNRLXXXXXXFRPASFLPAPPLDEWRGTSAFCDDFQCRCFEGIIASQARSIFPAPSNCSSNNTDLQQTHCTEDSLEVADEDHDGGIVSAGVIPENAIGSIMAAPCSNGDKPMASTSSWELNQEPALPMSPPVGPSLSTSHVHCEPDRGAASGPDACS 557
BLAST of mRNA_E-fasciculatus_F_contig138.2800.1 vs. uniprot
Match: D8LFZ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFZ9_ECTSI) HSP 1 Score: 192 bits (488), Expect = 4.000e-58 Identity = 85/131 (64.89%), Postives = 102/131 (77.86%), Query Frame = 1
Query: 13 FQKAAKGDTGAVLERLGRCVEVFERYPGVSRCMVQWCHLAHTGLAALAAIDDPKARGLYNRLRDVYNPSRPPASLPAPPFEEWRGISAVCDDFQCRLTQGIIASQALGVFSTPPHCTSNCAGVRRAYTKEE 405
+ A GD LERLG CVE+FERYPGV RCM+QWCHL H +AALAAIDD +AR L+NRLR+ YNPSRP AS PAPP EEW+G+SA CDDFQCRL + I+A + LG FSTPP CTSNC G+++ + K+E
Sbjct: 116 LNEQANGDADGALERLGYCVEIFERYPGVCRCMLQWCHLPHAAVAALAAIDDSRARELHNRLREAYNPSRPTASRPAPPSEEWQGLSAFCDDFQCRLFEAIVARKPLGAFSTPPDCTSNCEGLQQTHCKDE 246
BLAST of mRNA_E-fasciculatus_F_contig138.2800.1 vs. uniprot
Match: D8LU17_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU17_ECTSI) HSP 1 Score: 167 bits (422), Expect = 1.910e-45 Identity = 78/100 (78.00%), Postives = 84/100 (84.00%), Query Frame = 1
Query: 4 SLAFQKAAKGDTGAVLERLGRCVEVFERYPGVSRCMVQWCHLAHTGLAALAAIDDPKARGLYNRLRDVYNPSRPPASLPAPPFEEWRGISAVCDDFQCRL 303
+LAFQKAAKGD G LERLGRCVEVFE YPGV R M WCHLAH+ L ALAAIDD +RGLY RLR+VYNPSRP +SLPAPP+EEWRGISA CDDFQC L
Sbjct: 424 TLAFQKAAKGDAGGTLERLGRCVEVFELYPGVCRYMTLWCHLAHSVLGALAAIDDSSSRGLYTRLREVYNPSRPSSSLPAPPWEEWRGISAFCDDFQCSL 523 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig138.2800.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig138.2800.1 >prot_E-fasciculatus_F_contig138.2800.1 ID=prot_E-fasciculatus_F_contig138.2800.1|Name=mRNA_E-fasciculatus_F_contig138.2800.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=208bp RSLAFQKAAKGDTGAVLERLGRCVEVFERYPGVSRCMVQWCHLAHTGLAAback to top mRNA from alignment at E-fasciculatus_F_contig138:9842..11934- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig138.2800.1 ID=mRNA_E-fasciculatus_F_contig138.2800.1|Name=mRNA_E-fasciculatus_F_contig138.2800.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2093bp|location=Sequence derived from alignment at E-fasciculatus_F_contig138:9842..11934- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig138:9842..11934- >mRNA_E-fasciculatus_F_contig138.2800.1 ID=mRNA_E-fasciculatus_F_contig138.2800.1|Name=mRNA_E-fasciculatus_F_contig138.2800.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1248bp|location=Sequence derived from alignment at E-fasciculatus_F_contig138:9842..11934- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |