prot_E-fasciculatus_F_contig13781.2787.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-fasciculatus_F_contig13781.2787.1
Unique Name	prot_E-fasciculatus_F_contig13781.2787.1
Type	polypeptide
Organism	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length	207

Homology

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BLAST of mRNA_E-fasciculatus_F_contig13781.2787.1 vs. uniprot
Match: A0A6H5JEE0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEE0_9PHAE)

HSP 1 Score: 327 bits (838), Expect = 2.530e-109
Identity = 179/207 (86.47%), Postives = 187/207 (90.34%), Query Frame = 0

Query:    1 AGKVHGDRRAAAALEPQAGAGAGAAGGATFDPQQYRQQQQAQQGYALQEPWDKKNKNSHDQGNDSRDKEGPTGVAMGGPGMVSEGVPGSPPPPRTPLQEQAYQNMYRNQRTQLPGQAVGTQQPSSTLFRRSGAGGVFFIFLVMVCRSLNHYEYAEQMAGALRAMSMVPAVGLFLGNLVCMCLSLVESATNKQKARMKTMLTVDAVCE 207
            AG V  DRRAAA LEPQAGAG GA GGA FDPQ+YRQQQ AQ+ YALQEPWD  N NSHDQGND+RD+EG TG AMG P MVSEG P S PPPRTPLQE A+QNMYRNQRTQLPGQAVGTQQPSSTLFRRSGAGGVFFIFLVMVCRSLNHYEYAEQMAGALRAMS+VPAVGLFLGNLVCMCLSLVESATN+QKARMKTML+VDAVCE
Sbjct:  129 AGTVQADRRAAA-LEPQAGAGGGA-GGAAFDPQRYRQQQ-AQRRYALQEPWDSSN-NSHDQGNDNRDEEGATGAAMGVPEMVSEGAPASTPPPRTPLQEHAFQNMYRNQRTQLPGQAVGTQQPSSTLFRRSGAGGVFFIFLVMVCRSLNHYEYAEQMAGALRAMSLVPAVGLFLGNLVCMCLSLVESATNRQKARMKTMLSVDAVCE 331

[Close]

BLAST of mRNA_E-fasciculatus_F_contig13781.2787.1 vs. uniprot
Match: D7FSA4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSA4_ECTSI)

HSP 1 Score: 259 bits (662), Expect = 1.870e-85
Identity = 131/132 (99.24%), Postives = 131/132 (99.24%), Query Frame = 0

Query:   76 MGGPGMVSEGVPGSPPPPRTPLQEQAYQNMYRNQRTQLPGQAVGTQQPSSTLFRRSGAGGVFFIFLVMVCRSLNHYEYAEQMAGALRAMSMVPAVGLFLGNLVCMCLSLVESATNKQKARMKTMLTVDAVCE 207
            MGGPGMVSEGVPGS PPPRTPLQEQAYQNMYRNQRTQLPGQAVGTQQPSSTLFRRSGAGGVFFIFLVMVCRSLNHYEYAEQMAGALRAMSMVPAVGLFLGNLVCMCLSLVESATNKQKARMKTMLTVDAVCE
Sbjct:    1 MGGPGMVSEGVPGSTPPPRTPLQEQAYQNMYRNQRTQLPGQAVGTQQPSSTLFRRSGAGGVFFIFLVMVCRSLNHYEYAEQMAGALRAMSMVPAVGLFLGNLVCMCLSLVESATNKQKARMKTMLTVDAVCE 132

The following BLAST results are available for this feature:

BLAST of mRNA_E-fasciculatus_F_contig13781.2787.1 vs. uniprot

BLAST of mRNA_E-fasciculatus_F_contig13781.2787.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JEE0_9PHAE	2.530e-109	86.47	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FSA4_ECTSI	1.870e-85	99.24	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..131
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 132..151
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 163..185
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 152..162
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 186..207
None	No IPR available	TMHMM	TMhelix		coord: 163..185
None	No IPR available	TMHMM	TMhelix		coord: 126..148

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-fasciculatus_F_contig13781	contig	E-fasciculatus_F_contig13781:76..3522 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-fasciculatus_F_contig13781.2787.1	mRNA_E-fasciculatus_F_contig13781.2787.1	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	mRNA	E-fasciculatus_F_contig13781 76..3522 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-fasciculatus_F_contig13781.2787.1 ID=prot_E-fasciculatus_F_contig13781.2787.1|Name=mRNA_E-fasciculatus_F_contig13781.2787.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=207bp
AGKVHGDRRAAAALEPQAGAGAGAAGGATFDPQQYRQQQQAQQGYALQEP
WDKKNKNSHDQGNDSRDKEGPTGVAMGGPGMVSEGVPGSPPPPRTPLQEQ
AYQNMYRNQRTQLPGQAVGTQQPSSTLFRRSGAGGVFFIFLVMVCRSLNH
YEYAEQMAGALRAMSMVPAVGLFLGNLVCMCLSLVESATNKQKARMKTML
TVDAVCE