prot_E-fasciculatus_F_contig13777.2785.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13777.2785.1
Unique Nameprot_E-fasciculatus_F_contig13777.2785.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length288
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13777.2785.1 vs. uniprot
Match: D8LFY5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFY5_ECTSI)

HSP 1 Score: 305 bits (780), Expect = 1.410e-97
Identity = 194/291 (66.67%), Postives = 198/291 (68.04%), Query Frame = 0 
Query:    1 FRRRKSKVDPLASSGSKGTAAAAAXXXXXXXDGNSPXXXXXXXXXXXXARRGLFRRRRSNGHNHHDGGAETRPLSRASSSAGV---VGLASSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSSSAHSGVRARASAEGGGLLSKSDHSRAGXXXXXXXXXXXXXXXXRESPRTSLYPAPQPLHRIRSSGADGMGLSQDPNFFPPIPLSEDGCSEKPSSRGEVRFGDFIRLWCYSTYADKAGYVGYLRRTSRKRNSVGKGELFVLPPVPASPYSDGRLHGRLGPSLFG 288
            FRRRKSKVDPL SSGSKG AAAAA       DGN P            ARRGLFRRRRSNG                         VGL+ S                                  S+SAHSGVRAR S EGGGLLSKSD SR G   XXXXXXXXXXXXX ESP +S+YPAPQPLHRIRSSG DGMGLSQDPNFFPPIPLSEDGCSEKPSSRGEVRFGDFIRLWCYS YADKAGYVGYLRRTSRKRNSVGKGELFVLPPVPASPYSDGRLHGRLGPSLFG
Sbjct:   68 FRRRKSKVDPLGSSGSKGNAAAAAADGSSPADGNRPAASLHVP-----ARRGLFRRRRSNGXXXXXXXXXXXXXXXXXXXXXXXXXVGLSLS---------------DTESRPRATIAVCGGGGISSTSAHSGVRARGSPEGGGLLSKSDLSRTGAGGXXXXXXXXXXXXX-ESPPSSVYPAPQPLHRIRSSGDDGMGLSQDPNFFPPIPLSEDGCSEKPSSRGEVRFGDFIRLWCYSNYADKAGYVGYLRRTSRKRNSVGKGELFVLPPVPASPYSDGRLHGRLGPSLFG 337
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BLAST of mRNA_E-fasciculatus_F_contig13777.2785.1 vs. uniprot
Match: A0A6H5K175_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K175_9PHAE)

HSP 1 Score: 254 bits (649), Expect = 2.150e-74
Identity = 185/317 (58.36%), Postives = 188/317 (59.31%), Query Frame = 0 
Query:   13 SSGSKGTAAAAAXXXXXXXDGNSPXXXXXXXXXXXXARRGLFRRRRSNGHNHHDGGAETRPLSRASSSAGVVGLASSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSSSAHSGVRARASAEGGGLLSKSDHSRAGXXXXXXXXXXXXXXXXRESPRTSLYPAPQPLHRIRSSGADGMGLSQDPNFFPPIPLSEDGCSEKPSSRGEVRFGDFIRLWCYSTYADKAGYVGYLRRTSRKRNSVGKGELFVLPPVPASPYS-----------------------------------------DGRLHGRLGPSLFG 288
            SSGSKGTAAAA        DGN P             RRGLFRRRRSNGH                             XXXXXXXXXXXXXXXXXXXXX          +SSSAHSGVRAR S EG  LLSKSD S  G                RESP +S+YPAPQPLHRIRSS  DGMGLSQDPNFFPPIPLSEDGCSEKPSSRGEVRFGDFIRLWCYS YADKAGYVGYLRRTSRKRNSVGKGELFVLPPVPASPYS                                         DGRLHGRLGPSLFG
Sbjct:   79 SSGSKGTAAAA--DGSSPADGNRPAASLHVP-----GRRGLFRRRRSNGH-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATISVCGGGGISSSAHSGVRARGSPEGSVLLSKSDLSSTGVGGGWVGALASGGGG-RESPPSSVYPAPQPLHRIRSSAGDGMGLSQDPNFFPPIPLSEDGCSEKPSSRGEVRFGDFIRLWCYSNYADKAGYVGYLRRTSRKRNSVGKGELFVLPPVPASPYSIFHECCFKIVDPHSEKEDGDVLHFGEEISLVDDRGMVWNNKDGRLHGRLGPSLFG 376
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13777.2785.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LFY5_ECTSI1.410e-9766.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K175_9PHAE2.150e-7458.36CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 20..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..39
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..288
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 32..39
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13777contigE-fasciculatus_F_contig13777:13..2115 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13777.2785.1mRNA_E-fasciculatus_F_contig13777.2785.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13777 13..2117 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13777.2785.1 ID=prot_E-fasciculatus_F_contig13777.2785.1|Name=mRNA_E-fasciculatus_F_contig13777.2785.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=288bp
FRRRKSKVDPLASSGSKGTAAAAAAAAAAAADGNSPADGHKPAALHVPAR
RGLFRRRRSNGHNHHDGGAETRPLSRASSSAGVVGLASSGGGGGGGGAGI
SLSDTDSRPRATIAACGAGAGGMSSSAHSGVRARASAEGGGLLSKSDHSR
AGGAGGGGGGGTPPSGGGRESPRTSLYPAPQPLHRIRSSGADGMGLSQDP
NFFPPIPLSEDGCSEKPSSRGEVRFGDFIRLWCYSTYADKAGYVGYLRRT
SRKRNSVGKGELFVLPPVPASPYSDGRLHGRLGPSLFG
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